Chemical elements
  Fluorine
    Isotopes
    Energy
    Production
    Application
    PDB 16pk-1c8m
      16pk
      1a08
      1a29
      1a2n
      1a3t
      1a50
      1a5s
      1a6e
      1a71
      1a9u
      1ad8
      1ae4
      1afq
      1agr
      1ah0
      1ah3
      1aid
      1amn
      1apv
      1apw
      1axe
      1axg
      1b02
      1b0e
      1b0f
      1b99
      1bcd
      1bjg
      1bl6
      1bl7
      1bm7
      1bma
      1bmk
      1br1
      1br2
      1br4
      1bs1
      1bs3
      1bvv
      1bw7
      1bwf
      1bx9
      1bzc
      1bzh
      1bzj
      1c0l
      1c22
      1c50
      1c5i
      1c8m
    PDB 1c9d-1eau
    PDB 1ec0-1grn
    PDB 1gs4-1j97
    PDB 1jdj-1mu8
    PDB 1mue-1oyt
    PDB 1oz1-1rby
    PDB 1rbz-1tu6
    PDB 1tuy-1w9i
    PDB 1w9j-1yw2
    PDB 1yw9-2ax8
    PDB 2ax9-2dqt
    PDB 2dqu-2ftk
    PDB 2fvd-2hhn
    PDB 2hiw-2izs
    PDB 2j51-2onh
    PDB 2oo8-2pow
    PDB 2pq9-2qzl
    PDB 2qzo-2vev
    PDB 2vew-2wf7
    PDB 2wf8-2xhd
    PDB 2xkk-3ar9
    PDB 3az8-3cej
    PDB 3cem-3dh3
    PDB 3dhf-3el7
    PDB 3el8-3fln
    PDB 3flq-3gc7
    PDB 3gc8-3h7w
    PDB 3h82-3i81
    PDB 3i8d-3jx1
    PDB 3jx2-3ktk
    PDB 3ktu-3lj6
    PDB 3lk9-3mqf
    PDB 3ms4-3nz7
    PDB 3o1g-3p4a
    PDB 3p4b-3ti1
    PDB 3tik-4acx
    PDB 4afe-4fk3
    PDB 4fod-7gch

Fluorine in PDB, part 1 (1-50), PDB files 16pk - 1c8m






Experimental structures of coordination spheres of Fluorine (F) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Fluorine atoms.
PDB files 1-50 (16pk - 1c8m):
  1. 16pk - Phosphoglycerate Kinase From Trypanosoma Brucei Bisubstrate Analog
  2. 1a08 - C-Src (SH2 Domain) Complexed With Ace-Difluoro Phosphotyr- Glu-(N,N-Dipentyl Amine)
  3. 1a29 - Calmodulin Complexed With Trifluoperazine (1:2 Complex)
  4. 1a2n - Structure Of The C115A Mutant Of Mura Complexed With The Fluorinated Analog of the Reaction Tetrahedral Intermediate
  5. 1a3t - Staphylococcal Nuclease, V23C Variant, Complex With 2- Fluoroethane Thiol and 3',5'-Thymidine Diphosphate
  6. 1a50 - Crystal Structure of Wild-Type Tryptophan Synthase Complexed With 5- Fluoroindole Propanol Phosphate
  7. 1a5s - Crystal Structure of Wild-Type Tryptophan Synthase Complexed With 5- Fluoroindole Propanol Phosphate and L-Ser Bound As Amino Acrylate to the Beta Site
  8. 1a6e - Thermosome-Mg-Adp-ALF3 Complex
  9. 1a71 - Ternary Complex Of An Active Site Double Mutant of Horse Liver Alcohol Dehydrogenase, PHE93=>Trp, VAL203=>Ala With Nad and Trifluoroethanol
  10. 1a9u - The Complex Structure of the Map Kinase P38/SB203580
  11. 1ad8 - Complex of Thrombin With and Inhibitor Containing A Novel P1 Moiety
  12. 1ae4 - Aldehyde Reductase Complexed With Cofactor and Inhibitor, Alpha Carbon Atoms Only
  13. 1afq - Crystal Structure of Bovine Gamma-Chymotrypsin Complexed With A Synthetic Inhibitor
  14. 1agr - Complex of ALF4-Activated Gi-Alpha-1 With RGS4
  15. 1ah0 - Pig Aldose Reductase Complexed With Sorbinil
  16. 1ah3 - Aldose Reductase Complexed With Tolrestat Inhibitor
  17. 1aid - Structure Of A Non-Peptide Inhibitor Complexed With Hiv-1 Protease: Developing A Cycle of Structure-Based Drug Design
  18. 1amn - Transition State Analog: Acetylcholinesterase Complexed With M-(N,N,N-Trimethylammonio)Trifluoroacetophenone
  19. 1apv - Crystallographic Analysis of Transition State Mimics Bound to Penicillopepsin: Difluorostatine-and Difluorostatone-Containing Peptides
  20. 1apw - Crystallographic Analysis of Transition State Mimics Bound to Penicillopepsin: Difluorostatine-and Difluorostatone-Containing Peptides
  21. 1axe - Crystal Structure Of the Active-Site Mutant PHE93->Trp of Horse Liver Alcohol Dehydrogenase in Complex With Nad and Inhibitor Trifluoroethanol
  22. 1axg - Crystal Structure Of the VAL203->Ala Mutant of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad and Inhibitor Trifluoroethanol Solved to 2.5 Angstrom Resolution
  23. 1b02 - Crystal Structure of Thymidylate Synthase A From Bacillus Subtilis
  24. 1b0e - Crystal Structure of Porcine Pancreatic Elastase With Mdl 101,146
  25. 1b0f - Crystal Structure of Human Neutrophil Elastase With Mdl 101, 146
  26. 1b99 - 3'-Fluoro-Uridine Diphosphate Binding to Nucleoside Diphosphate Kinase
  27. 1bcd - X-Ray Crystallographic Structure of A Complex Between Human Carbonic Anhydrase II and A New Topical Inhibitor, Trifluoromethane Sulphonamide
  28. 1bjg - D221(169)N Mutant Does Not Promote Opening of the Cofactor Imidazolidine Ring
  29. 1bl6 - The Complex Structure of the Map Kinase P38/SB216995
  30. 1bl7 - The Complex Structure of the Map Kinase P38/SB220025
  31. 1bm7 - Human Transthyretin (Prealbumin) Complex With Flufenamic Acid (2-[[3-(Trifluoromethyl)Phenyl]Amino] Benzoic Acid)
  32. 1bma - Benzyl Methyl Aminimide Inhibitor Complexed to Porcine Pancreatic Elastase
  33. 1bmk - The Complex Structure of the Map Kinase P38/SB218655
  34. 1br1 - Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.ALF4 Bound At the Active Site
  35. 1br2 - Smooth Muscle Myosin Motor Domain Complexed With Mgadp.ALF4
  36. 1br4 - Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.BEF3 Bound At the Active Site
  37. 1bs1 - Dethiobiotin Synthetase Complexed With Dethiobiotin, Adp , Inorganic Phosphate and Magnesium
  38. 1bs3 - P.Shermanii Sod(Fe+3) Fluoride
  39. 1bvv - Sugar Ring Distortion in the Glycosyl-Enzyme Intermediate of A Family G/11 Xylanase
  40. 1bw7 - Solution Structure of A Dna Duplex Containing A Replicable Difluorotoluene-Adenine Pair
  41. 1bwf - Escherichia Coli Glycerol Kinase Mutant With Bound Atp Analog Showing Substantial Domain Motion
  42. 1bx9 - Glutathione S-Transferase in Complex With Herbicide
  43. 1bzc - Human PTP1B Catalytic Domain Complexed With Tpi
  44. 1bzh - Cyclic Peptide Inhibitor of Human PTP1B
  45. 1bzj - Human PTP1B Complexed With Tpicooh
  46. 1c0l - D-Amino Acid Oxidase: Structure Of Substrate Complexes At Very High Resolution Reveal the Chemical Reacttion Mechanism of Flavin Dehydrogenation
  47. 1c22 - E. Coli Methionine Aminopeptidase: Trifluoromethionine Complex
  48. 1c50 - Identification and Structural Characterization Of A Novel Allosteric Binding Site of Glycogen Phosphorylase B
  49. 1c5i - Hydrogen Bonding and Catalysis: An Unexpected Explanation For How A Single Amino Acid Substitution Can Change the pH Optimum of A Glycosidase
  50. 1c8m - Refined Crystal Structure of Human Rhinovirus 16 Complexed With VP63843 (Pleconaril), An Anti-Picornaviral Drug Currently in Clinical Trials


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Fluorine coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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