Fluorine in PDB 7kop: The Crystal Structure of the 2009/H1N1/California Pa Endonuclease I38T Mutant in Complex with SJ000988539

Protein crystallography data

The structure of The Crystal Structure of the 2009/H1N1/California Pa Endonuclease I38T Mutant in Complex with SJ000988539, PDB code: 7kop was solved by M.G.Cuypers, P.J.Slavish, J.Seetharaman, S.W.White, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.68 / 2.33
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 89.594, 89.594, 131.826, 90, 90, 90
R / Rfree (%) 20.7 / 22.8

Other elements in 7kop:

The structure of The Crystal Structure of the 2009/H1N1/California Pa Endonuclease I38T Mutant in Complex with SJ000988539 also contains other interesting chemical elements:

Manganese (Mn) 2 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the The Crystal Structure of the 2009/H1N1/California Pa Endonuclease I38T Mutant in Complex with SJ000988539 (pdb code 7kop). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the The Crystal Structure of the 2009/H1N1/California Pa Endonuclease I38T Mutant in Complex with SJ000988539, PDB code: 7kop:

Fluorine binding site 1 out of 1 in 7kop

Go back to Fluorine Binding Sites List in 7kop
Fluorine binding site 1 out of 1 in the The Crystal Structure of the 2009/H1N1/California Pa Endonuclease I38T Mutant in Complex with SJ000988539


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of The Crystal Structure of the 2009/H1N1/California Pa Endonuclease I38T Mutant in Complex with SJ000988539 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F203

b:94.7
occ:1.00
F25 A:WTM203 0.0 94.7 1.0
C24 A:WTM203 1.3 105.9 1.0
C19 A:WTM203 2.4 98.8 1.0
C23 A:WTM203 2.4 111.8 1.0
O A:HOH309 2.8 59.5 1.0
N16 A:WTM203 2.8 86.2 1.0
C17 A:WTM203 2.9 89.9 1.0
C20 A:WTM203 3.6 102.7 1.0
C22 A:WTM203 3.6 109.2 1.0
C21 A:WTM203 4.1 105.0 1.0
C14 A:WTM203 4.1 81.8 1.0
CB A:HIS41 4.2 44.0 1.0
N18 A:WTM203 4.2 99.3 1.0
O A:HOH323 4.2 62.9 1.0
O A:ALA37 4.2 57.8 1.0
CB A:ALA37 4.4 56.8 1.0
CG A:HIS41 4.5 54.0 1.0
OH A:TYR130 4.5 114.0 1.0
C A:ALA37 4.6 48.3 1.0
CD2 A:HIS41 4.6 53.0 1.0
O15 A:WTM203 4.7 61.9 1.0
O A:VAL122 4.7 66.9 1.0

Reference:

M.G.Cuypers, P.J.Slavish, J.Seetharaman, S.W.White. The Crystal Structure of the 2009/H1N1/California Pa Endonuclease I38T Mutant in Complex with SJ000988539 To Be Published.
Page generated: Thu Nov 25 09:13:05 2021

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