Fluorine in PDB 7mxy: Cryo-Em Structure of Pffnt-Inhibitor Complex
Fluorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
25;
Binding sites:
The binding sites of Fluorine atom in the Cryo-Em Structure of Pffnt-Inhibitor Complex
(pdb code 7mxy). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 25 binding sites of Fluorine where determined in the
Cryo-Em Structure of Pffnt-Inhibitor Complex, PDB code: 7mxy:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Fluorine binding site 1 out
of 25 in 7mxy
Go back to
Fluorine Binding Sites List in 7mxy
Fluorine binding site 1 out
of 25 in the Cryo-Em Structure of Pffnt-Inhibitor Complex
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Cryo-Em Structure of Pffnt-Inhibitor Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1001
b:36.9
occ:1.00
|
F16
|
A:HV61001
|
0.0
|
36.9
|
1.0
|
C15
|
A:HV61001
|
1.4
|
36.9
|
1.0
|
F18
|
A:HV61001
|
2.2
|
36.9
|
1.0
|
F17
|
A:HV61001
|
2.2
|
36.9
|
1.0
|
C14
|
A:HV61001
|
2.3
|
36.9
|
1.0
|
HB3
|
A:ALA93
|
2.5
|
36.4
|
1.0
|
HE1
|
A:PHE90
|
2.5
|
35.2
|
1.0
|
F19
|
A:HV61001
|
2.6
|
36.9
|
1.0
|
F20
|
A:HV61001
|
2.7
|
36.9
|
1.0
|
CE1
|
A:PHE90
|
3.1
|
35.2
|
1.0
|
HG11
|
A:VAL220
|
3.3
|
35.6
|
1.0
|
CB
|
A:ALA93
|
3.4
|
36.4
|
1.0
|
HB1
|
A:ALA93
|
3.6
|
36.4
|
1.0
|
C12
|
A:HV61001
|
3.6
|
36.9
|
1.0
|
H
|
A:PHE94
|
3.7
|
37.1
|
1.0
|
HZ
|
A:PHE90
|
3.7
|
35.2
|
1.0
|
CZ
|
A:PHE90
|
3.7
|
35.2
|
1.0
|
HG13
|
A:VAL220
|
3.8
|
35.6
|
1.0
|
CD1
|
A:PHE90
|
3.8
|
35.2
|
1.0
|
HB2
|
A:ALA93
|
3.9
|
36.4
|
1.0
|
HD1
|
A:PHE90
|
3.9
|
35.2
|
1.0
|
HB2
|
A:PHE94
|
4.0
|
37.1
|
1.0
|
N
|
A:PHE94
|
4.0
|
37.1
|
1.0
|
CG1
|
A:VAL220
|
4.0
|
35.6
|
1.0
|
HE2
|
A:PHE223
|
4.2
|
35.0
|
1.0
|
HD2
|
A:HIS230
|
4.3
|
34.5
|
1.0
|
H7
|
A:HV61001
|
4.3
|
36.9
|
1.0
|
HG22
|
A:VAL54
|
4.3
|
35.1
|
1.0
|
H
|
A:ALA93
|
4.3
|
36.4
|
1.0
|
CA
|
A:ALA93
|
4.3
|
36.4
|
1.0
|
C
|
A:ALA93
|
4.4
|
36.4
|
1.0
|
HG21
|
A:VAL220
|
4.4
|
35.6
|
1.0
|
O21
|
A:HV61001
|
4.4
|
36.9
|
1.0
|
HE2
|
A:HIS230
|
4.4
|
34.5
|
1.0
|
C11
|
A:HV61001
|
4.4
|
36.9
|
1.0
|
H9
|
A:HV61001
|
4.4
|
36.9
|
1.0
|
HG22
|
A:VAL220
|
4.5
|
35.6
|
1.0
|
HA
|
A:PRO91
|
4.5
|
36.1
|
1.0
|
HA
|
A:PHE94
|
4.6
|
37.1
|
1.0
|
HG12
|
A:VAL220
|
4.6
|
35.6
|
1.0
|
HD11
|
A:ILE97
|
4.6
|
36.7
|
1.0
|
HG13
|
A:VAL54
|
4.7
|
35.1
|
1.0
|
CA
|
A:PHE94
|
4.7
|
37.1
|
1.0
|
N
|
A:ALA93
|
4.7
|
36.4
|
1.0
|
CB
|
A:PHE94
|
4.8
|
37.1
|
1.0
|
CD2
|
A:HIS230
|
4.8
|
34.5
|
1.0
|
CG2
|
A:VAL220
|
4.8
|
35.6
|
1.0
|
HD11
|
A:LEU104
|
4.8
|
35.5
|
1.0
|
O
|
A:PHE90
|
4.9
|
35.2
|
1.0
|
NE2
|
A:HIS230
|
4.9
|
34.5
|
1.0
|
HD2
|
A:PHE94
|
4.9
|
37.1
|
1.0
|
CE2
|
A:PHE90
|
4.9
|
35.2
|
1.0
|
HD12
|
A:LEU104
|
4.9
|
35.5
|
1.0
|
CG
|
A:PHE90
|
5.0
|
35.2
|
1.0
|
|
Fluorine binding site 2 out
of 25 in 7mxy
Go back to
Fluorine Binding Sites List in 7mxy
Fluorine binding site 2 out
of 25 in the Cryo-Em Structure of Pffnt-Inhibitor Complex
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Cryo-Em Structure of Pffnt-Inhibitor Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1001
b:36.9
occ:1.00
|
F17
|
A:HV61001
|
0.0
|
36.9
|
1.0
|
C15
|
A:HV61001
|
1.4
|
36.9
|
1.0
|
F18
|
A:HV61001
|
2.2
|
36.9
|
1.0
|
F16
|
A:HV61001
|
2.2
|
36.9
|
1.0
|
C14
|
A:HV61001
|
2.4
|
36.9
|
1.0
|
F20
|
A:HV61001
|
2.7
|
36.9
|
1.0
|
HE2
|
A:HIS230
|
2.7
|
34.5
|
1.0
|
HD11
|
A:LEU104
|
2.9
|
35.5
|
1.0
|
C12
|
A:HV61001
|
2.9
|
36.9
|
1.0
|
HG22
|
A:VAL54
|
2.9
|
35.1
|
1.0
|
O21
|
A:HV61001
|
3.1
|
36.9
|
1.0
|
NE2
|
A:HIS230
|
3.2
|
34.5
|
1.0
|
HD13
|
A:LEU104
|
3.2
|
35.5
|
1.0
|
HD12
|
A:LEU104
|
3.3
|
35.5
|
1.0
|
CD1
|
A:LEU104
|
3.3
|
35.5
|
1.0
|
H9
|
A:HV61001
|
3.4
|
36.9
|
1.0
|
F19
|
A:HV61001
|
3.5
|
36.9
|
1.0
|
HD2
|
A:HIS230
|
3.6
|
34.5
|
1.0
|
HE1
|
A:PHE90
|
3.6
|
35.2
|
1.0
|
CD2
|
A:HIS230
|
3.7
|
34.5
|
1.0
|
HB3
|
A:ALA93
|
3.7
|
36.4
|
1.0
|
C11
|
A:HV61001
|
3.8
|
36.9
|
1.0
|
CG2
|
A:VAL54
|
3.8
|
35.1
|
1.0
|
HG13
|
A:VAL54
|
3.9
|
35.1
|
1.0
|
HZ
|
A:PHE90
|
3.9
|
35.2
|
1.0
|
HB1
|
A:ALA93
|
3.9
|
36.4
|
1.0
|
HG11
|
A:VAL54
|
4.0
|
35.1
|
1.0
|
HG21
|
A:VAL54
|
4.0
|
35.1
|
1.0
|
H7
|
A:HV61001
|
4.1
|
36.9
|
1.0
|
HD11
|
A:ILE97
|
4.1
|
36.7
|
1.0
|
HD13
|
A:ILE97
|
4.1
|
36.7
|
1.0
|
CE1
|
A:HIS230
|
4.2
|
34.5
|
1.0
|
CE1
|
A:PHE90
|
4.3
|
35.2
|
1.0
|
CB
|
A:ALA93
|
4.3
|
36.4
|
1.0
|
CG1
|
A:VAL54
|
4.3
|
35.1
|
1.0
|
HD12
|
A:ILE97
|
4.4
|
36.7
|
1.0
|
HG23
|
A:VAL54
|
4.4
|
35.1
|
1.0
|
CZ
|
A:PHE90
|
4.4
|
35.2
|
1.0
|
CD1
|
A:ILE97
|
4.4
|
36.7
|
1.0
|
HE1
|
A:HIS230
|
4.5
|
34.5
|
1.0
|
HG1
|
A:THR106
|
4.7
|
35.3
|
1.0
|
CB
|
A:VAL54
|
4.7
|
35.1
|
1.0
|
CG
|
A:LEU104
|
4.8
|
35.5
|
1.0
|
CG
|
A:HIS230
|
4.8
|
34.5
|
1.0
|
HB
|
A:ILE232
|
4.8
|
34.3
|
1.0
|
HD21
|
A:LEU104
|
4.8
|
35.5
|
1.0
|
HB2
|
A:ALA93
|
4.8
|
36.4
|
1.0
|
HA
|
A:VAL54
|
4.9
|
35.1
|
1.0
|
C09
|
A:HV61001
|
4.9
|
36.9
|
1.0
|
ND1
|
A:HIS230
|
5.0
|
34.5
|
1.0
|
|
Fluorine binding site 3 out
of 25 in 7mxy
Go back to
Fluorine Binding Sites List in 7mxy
Fluorine binding site 3 out
of 25 in the Cryo-Em Structure of Pffnt-Inhibitor Complex
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Cryo-Em Structure of Pffnt-Inhibitor Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1001
b:36.9
occ:1.00
|
F18
|
A:HV61001
|
0.0
|
36.9
|
1.0
|
C15
|
A:HV61001
|
1.4
|
36.9
|
1.0
|
F16
|
A:HV61001
|
2.2
|
36.9
|
1.0
|
F17
|
A:HV61001
|
2.2
|
36.9
|
1.0
|
C14
|
A:HV61001
|
2.3
|
36.9
|
1.0
|
HD11
|
A:ILE97
|
2.5
|
36.7
|
1.0
|
HB3
|
A:ALA93
|
2.7
|
36.4
|
1.0
|
H7
|
A:HV61001
|
2.8
|
36.9
|
1.0
|
F19
|
A:HV61001
|
2.8
|
36.9
|
1.0
|
C12
|
A:HV61001
|
2.8
|
36.9
|
1.0
|
HA
|
A:PHE94
|
2.9
|
37.1
|
1.0
|
HB1
|
A:ALA93
|
3.0
|
36.4
|
1.0
|
C11
|
A:HV61001
|
3.1
|
36.9
|
1.0
|
N
|
A:PHE94
|
3.1
|
37.1
|
1.0
|
CD1
|
A:ILE97
|
3.2
|
36.7
|
1.0
|
HD12
|
A:LEU104
|
3.2
|
35.5
|
1.0
|
CB
|
A:ALA93
|
3.3
|
36.4
|
1.0
|
C
|
A:ALA93
|
3.3
|
36.4
|
1.0
|
H
|
A:PHE94
|
3.3
|
37.1
|
1.0
|
HD12
|
A:ILE97
|
3.3
|
36.7
|
1.0
|
HD13
|
A:ILE97
|
3.4
|
36.7
|
1.0
|
HD11
|
A:LEU104
|
3.4
|
35.5
|
1.0
|
CA
|
A:PHE94
|
3.4
|
37.1
|
1.0
|
F20
|
A:HV61001
|
3.5
|
36.9
|
1.0
|
HB2
|
A:PHE94
|
3.5
|
37.1
|
1.0
|
HG22
|
A:VAL54
|
3.6
|
35.1
|
1.0
|
O
|
A:ALA93
|
3.6
|
36.4
|
1.0
|
CD1
|
A:LEU104
|
3.8
|
35.5
|
1.0
|
CA
|
A:ALA93
|
3.9
|
36.4
|
1.0
|
O21
|
A:HV61001
|
3.9
|
36.9
|
1.0
|
CB
|
A:PHE94
|
4.0
|
37.1
|
1.0
|
HB2
|
A:ALA93
|
4.1
|
36.4
|
1.0
|
HD13
|
A:LEU104
|
4.1
|
35.5
|
1.0
|
H9
|
A:HV61001
|
4.3
|
36.9
|
1.0
|
HD2
|
A:PHE94
|
4.4
|
37.1
|
1.0
|
C09
|
A:HV61001
|
4.4
|
36.9
|
1.0
|
CG2
|
A:VAL54
|
4.5
|
35.1
|
1.0
|
HE2
|
A:HIS230
|
4.5
|
34.5
|
1.0
|
HB
|
A:ILE97
|
4.5
|
36.7
|
1.0
|
CG1
|
A:ILE97
|
4.6
|
36.7
|
1.0
|
HG23
|
A:VAL54
|
4.6
|
35.1
|
1.0
|
HA
|
A:ALA93
|
4.6
|
36.4
|
1.0
|
HE1
|
A:PHE90
|
4.6
|
35.2
|
1.0
|
CG
|
A:PHE94
|
4.7
|
37.1
|
1.0
|
HG13
|
A:ILE97
|
4.7
|
36.7
|
1.0
|
H5
|
A:HV61001
|
4.7
|
36.9
|
1.0
|
N
|
A:ALA93
|
4.8
|
36.4
|
1.0
|
HB3
|
A:PHE94
|
4.8
|
37.1
|
1.0
|
H
|
A:ALA93
|
4.8
|
36.4
|
1.0
|
C
|
A:PHE94
|
4.8
|
37.1
|
1.0
|
CD2
|
A:PHE94
|
4.8
|
37.1
|
1.0
|
HG21
|
A:VAL54
|
4.9
|
35.1
|
1.0
|
|
Fluorine binding site 4 out
of 25 in 7mxy
Go back to
Fluorine Binding Sites List in 7mxy
Fluorine binding site 4 out
of 25 in the Cryo-Em Structure of Pffnt-Inhibitor Complex
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Cryo-Em Structure of Pffnt-Inhibitor Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1001
b:36.9
occ:1.00
|
F19
|
A:HV61001
|
0.0
|
36.9
|
1.0
|
C14
|
A:HV61001
|
1.4
|
36.9
|
1.0
|
F20
|
A:HV61001
|
2.2
|
36.9
|
1.0
|
C15
|
A:HV61001
|
2.3
|
36.9
|
1.0
|
C12
|
A:HV61001
|
2.4
|
36.9
|
1.0
|
HD2
|
A:PHE94
|
2.4
|
37.1
|
1.0
|
HB2
|
A:PHE94
|
2.6
|
37.1
|
1.0
|
F16
|
A:HV61001
|
2.6
|
36.9
|
1.0
|
H7
|
A:HV61001
|
2.7
|
36.9
|
1.0
|
F18
|
A:HV61001
|
2.8
|
36.9
|
1.0
|
HG22
|
A:VAL220
|
2.9
|
35.6
|
1.0
|
C11
|
A:HV61001
|
2.9
|
36.9
|
1.0
|
HG21
|
A:VAL220
|
3.1
|
35.6
|
1.0
|
CD2
|
A:PHE94
|
3.3
|
37.1
|
1.0
|
H9
|
A:HV61001
|
3.4
|
36.9
|
1.0
|
CB
|
A:PHE94
|
3.4
|
37.1
|
1.0
|
CG2
|
A:VAL220
|
3.4
|
35.6
|
1.0
|
O21
|
A:HV61001
|
3.5
|
36.9
|
1.0
|
F17
|
A:HV61001
|
3.5
|
36.9
|
1.0
|
HG11
|
A:VAL220
|
3.7
|
35.6
|
1.0
|
HG13
|
A:VAL220
|
3.7
|
35.6
|
1.0
|
CG
|
A:PHE94
|
3.8
|
37.1
|
1.0
|
HG22
|
A:VAL196
|
3.8
|
36.2
|
1.0
|
HA
|
A:PHE94
|
3.8
|
37.1
|
1.0
|
H
|
A:PHE94
|
3.9
|
37.1
|
1.0
|
CA
|
A:PHE94
|
4.0
|
37.1
|
1.0
|
CG1
|
A:VAL220
|
4.1
|
35.6
|
1.0
|
HG23
|
A:VAL220
|
4.1
|
35.6
|
1.0
|
N
|
A:PHE94
|
4.1
|
37.1
|
1.0
|
HB3
|
A:PHE94
|
4.1
|
37.1
|
1.0
|
CE2
|
A:PHE94
|
4.3
|
37.1
|
1.0
|
HB3
|
A:ALA93
|
4.4
|
36.4
|
1.0
|
CB
|
A:VAL220
|
4.4
|
35.6
|
1.0
|
C09
|
A:HV61001
|
4.4
|
36.9
|
1.0
|
HE2
|
A:PHE94
|
4.4
|
37.1
|
1.0
|
HE1
|
A:PHE90
|
4.5
|
35.2
|
1.0
|
HG13
|
A:VAL216
|
4.6
|
37.2
|
1.0
|
H5
|
A:HV61001
|
4.6
|
36.9
|
1.0
|
HE2
|
A:HIS230
|
4.7
|
34.5
|
1.0
|
CG2
|
A:VAL196
|
4.7
|
36.2
|
1.0
|
HG13
|
A:VAL196
|
4.7
|
36.2
|
1.0
|
HD2
|
A:HIS230
|
4.8
|
34.5
|
1.0
|
HD12
|
A:LEU104
|
4.8
|
35.5
|
1.0
|
HE2
|
A:PHE223
|
4.9
|
35.0
|
1.0
|
HG21
|
A:VAL196
|
4.9
|
36.2
|
1.0
|
HG12
|
A:VAL220
|
5.0
|
35.6
|
1.0
|
|
Fluorine binding site 5 out
of 25 in 7mxy
Go back to
Fluorine Binding Sites List in 7mxy
Fluorine binding site 5 out
of 25 in the Cryo-Em Structure of Pffnt-Inhibitor Complex
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Cryo-Em Structure of Pffnt-Inhibitor Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1001
b:36.9
occ:1.00
|
F20
|
A:HV61001
|
0.0
|
36.9
|
1.0
|
C14
|
A:HV61001
|
1.4
|
36.9
|
1.0
|
H9
|
A:HV61001
|
2.1
|
36.9
|
1.0
|
F19
|
A:HV61001
|
2.2
|
36.9
|
1.0
|
C15
|
A:HV61001
|
2.3
|
36.9
|
1.0
|
C12
|
A:HV61001
|
2.3
|
36.9
|
1.0
|
O21
|
A:HV61001
|
2.5
|
36.9
|
1.0
|
F17
|
A:HV61001
|
2.7
|
36.9
|
1.0
|
HD2
|
A:HIS230
|
2.7
|
34.5
|
1.0
|
F16
|
A:HV61001
|
2.7
|
36.9
|
1.0
|
HG22
|
A:VAL196
|
2.7
|
36.2
|
1.0
|
HE2
|
A:HIS230
|
2.9
|
34.5
|
1.0
|
CD2
|
A:HIS230
|
3.2
|
34.5
|
1.0
|
HG21
|
A:VAL196
|
3.3
|
36.2
|
1.0
|
NE2
|
A:HIS230
|
3.3
|
34.5
|
1.0
|
CG2
|
A:VAL196
|
3.4
|
36.2
|
1.0
|
F18
|
A:HV61001
|
3.5
|
36.9
|
1.0
|
C11
|
A:HV61001
|
3.6
|
36.9
|
1.0
|
HG13
|
A:VAL220
|
3.7
|
35.6
|
1.0
|
HE1
|
A:PHE90
|
3.7
|
35.2
|
1.0
|
HE2
|
A:PHE223
|
3.8
|
35.0
|
1.0
|
HG22
|
A:VAL220
|
3.8
|
35.6
|
1.0
|
H7
|
A:HV61001
|
3.9
|
36.9
|
1.0
|
HG23
|
A:VAL196
|
3.9
|
36.2
|
1.0
|
HG11
|
A:VAL220
|
4.2
|
35.6
|
1.0
|
CE2
|
A:PHE223
|
4.2
|
35.0
|
1.0
|
HG11
|
A:VAL196
|
4.3
|
36.2
|
1.0
|
HD2
|
A:PHE94
|
4.3
|
37.1
|
1.0
|
HG13
|
A:VAL196
|
4.4
|
36.2
|
1.0
|
HG1
|
A:THR106
|
4.4
|
35.3
|
1.0
|
CG1
|
A:VAL220
|
4.4
|
35.6
|
1.0
|
CB
|
A:VAL196
|
4.6
|
36.2
|
1.0
|
HD13
|
A:LEU104
|
4.6
|
35.5
|
1.0
|
CG
|
A:HIS230
|
4.6
|
34.5
|
1.0
|
CG1
|
A:VAL196
|
4.6
|
36.2
|
1.0
|
CE1
|
A:PHE90
|
4.6
|
35.2
|
1.0
|
HD12
|
A:LEU104
|
4.6
|
35.5
|
1.0
|
CG2
|
A:VAL220
|
4.6
|
35.6
|
1.0
|
CE1
|
A:HIS230
|
4.7
|
34.5
|
1.0
|
HG21
|
A:VAL220
|
4.7
|
35.6
|
1.0
|
HB2
|
A:PHE94
|
4.7
|
37.1
|
1.0
|
HA
|
A:VAL196
|
4.8
|
36.2
|
1.0
|
C09
|
A:HV61001
|
4.8
|
36.9
|
1.0
|
HZ
|
A:PHE223
|
4.8
|
35.0
|
1.0
|
HD2
|
A:PHE223
|
4.8
|
35.0
|
1.0
|
CZ
|
A:PHE223
|
4.8
|
35.0
|
1.0
|
CD2
|
A:PHE223
|
4.8
|
35.0
|
1.0
|
O10
|
A:HV61001
|
4.9
|
36.9
|
1.0
|
CD1
|
A:LEU104
|
5.0
|
35.5
|
1.0
|
HD11
|
A:LEU104
|
5.0
|
35.5
|
1.0
|
|
Fluorine binding site 6 out
of 25 in 7mxy
Go back to
Fluorine Binding Sites List in 7mxy
Fluorine binding site 6 out
of 25 in the Cryo-Em Structure of Pffnt-Inhibitor Complex
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Cryo-Em Structure of Pffnt-Inhibitor Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F401
b:36.9
occ:1.00
|
F16
|
B:HV6401
|
0.0
|
36.9
|
1.0
|
C15
|
B:HV6401
|
1.4
|
36.9
|
1.0
|
F17
|
B:HV6401
|
2.2
|
36.9
|
1.0
|
F18
|
B:HV6401
|
2.2
|
36.9
|
1.0
|
C14
|
B:HV6401
|
2.4
|
36.9
|
1.0
|
HD12
|
B:ILE97
|
2.5
|
37.1
|
1.0
|
C12
|
B:HV6401
|
2.8
|
36.9
|
1.0
|
H7
|
B:HV6401
|
2.8
|
36.9
|
1.0
|
F20
|
B:HV6401
|
2.8
|
36.9
|
1.0
|
C11
|
B:HV6401
|
3.0
|
36.9
|
1.0
|
HB3
|
B:ALA93
|
3.0
|
36.8
|
1.0
|
HB1
|
B:ALA93
|
3.0
|
36.8
|
1.0
|
HG22
|
B:VAL54
|
3.0
|
35.7
|
1.0
|
HD11
|
B:ILE97
|
3.0
|
37.1
|
1.0
|
CD1
|
B:ILE97
|
3.1
|
37.1
|
1.0
|
HD13
|
B:ILE97
|
3.2
|
37.1
|
1.0
|
HD22
|
B:LEU104
|
3.3
|
35.7
|
1.0
|
CB
|
B:ALA93
|
3.4
|
36.8
|
1.0
|
HA
|
B:PHE94
|
3.5
|
37.1
|
1.0
|
F19
|
B:HV6401
|
3.5
|
36.9
|
1.0
|
C
|
B:ALA93
|
3.7
|
36.8
|
1.0
|
N
|
B:PHE94
|
3.7
|
37.1
|
1.0
|
O21
|
B:HV6401
|
3.8
|
36.9
|
1.0
|
CG2
|
B:VAL54
|
3.9
|
35.7
|
1.0
|
O
|
B:ALA93
|
3.9
|
36.8
|
1.0
|
H
|
B:PHE94
|
4.0
|
37.1
|
1.0
|
CA
|
B:PHE94
|
4.1
|
37.1
|
1.0
|
HG21
|
B:VAL54
|
4.1
|
35.7
|
1.0
|
HG23
|
B:VAL54
|
4.1
|
35.7
|
1.0
|
CD2
|
B:LEU104
|
4.2
|
35.7
|
1.0
|
CA
|
B:ALA93
|
4.2
|
36.8
|
1.0
|
C09
|
B:HV6401
|
4.2
|
36.9
|
1.0
|
H9
|
B:HV6401
|
4.2
|
36.9
|
1.0
|
HB2
|
B:ALA93
|
4.2
|
36.8
|
1.0
|
HD2
|
B:PHE94
|
4.3
|
37.1
|
1.0
|
HD21
|
B:LEU104
|
4.4
|
35.7
|
1.0
|
H5
|
B:HV6401
|
4.4
|
36.9
|
1.0
|
CG1
|
B:ILE97
|
4.4
|
37.1
|
1.0
|
HB2
|
B:PHE94
|
4.4
|
37.1
|
1.0
|
HD23
|
B:LEU104
|
4.6
|
35.7
|
1.0
|
HB
|
B:ILE97
|
4.6
|
37.1
|
1.0
|
HE2
|
B:PHE90
|
4.6
|
36.0
|
1.0
|
HG13
|
B:ILE97
|
4.6
|
37.1
|
1.0
|
CB
|
B:PHE94
|
4.7
|
37.1
|
1.0
|
HD13
|
B:LEU104
|
4.8
|
35.7
|
1.0
|
O10
|
B:HV6401
|
4.8
|
36.9
|
1.0
|
CD2
|
B:PHE94
|
4.8
|
37.1
|
1.0
|
HA
|
B:ALA93
|
4.8
|
36.8
|
1.0
|
HA
|
B:VAL54
|
4.9
|
35.7
|
1.0
|
HB2
|
B:LEU104
|
5.0
|
35.7
|
1.0
|
|
Fluorine binding site 7 out
of 25 in 7mxy
Go back to
Fluorine Binding Sites List in 7mxy
Fluorine binding site 7 out
of 25 in the Cryo-Em Structure of Pffnt-Inhibitor Complex
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Cryo-Em Structure of Pffnt-Inhibitor Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F401
b:36.9
occ:1.00
|
F17
|
B:HV6401
|
0.0
|
36.9
|
1.0
|
C15
|
B:HV6401
|
1.4
|
36.9
|
1.0
|
F16
|
B:HV6401
|
2.2
|
36.9
|
1.0
|
F18
|
B:HV6401
|
2.2
|
36.9
|
1.0
|
C14
|
B:HV6401
|
2.3
|
36.9
|
1.0
|
HE2
|
B:PHE90
|
2.5
|
36.0
|
1.0
|
HB3
|
B:ALA93
|
2.6
|
36.8
|
1.0
|
F20
|
B:HV6401
|
2.6
|
36.9
|
1.0
|
F19
|
B:HV6401
|
2.8
|
36.9
|
1.0
|
CE2
|
B:PHE90
|
3.0
|
36.0
|
1.0
|
CB
|
B:ALA93
|
3.4
|
36.8
|
1.0
|
HB1
|
B:ALA93
|
3.5
|
36.8
|
1.0
|
HG11
|
B:VAL220
|
3.5
|
36.2
|
1.0
|
HZ
|
B:PHE90
|
3.6
|
36.0
|
1.0
|
CZ
|
B:PHE90
|
3.6
|
36.0
|
1.0
|
C12
|
B:HV6401
|
3.7
|
36.9
|
1.0
|
CD2
|
B:PHE90
|
3.8
|
36.0
|
1.0
|
HG22
|
B:VAL54
|
3.8
|
35.7
|
1.0
|
HD2
|
B:PHE90
|
3.9
|
36.0
|
1.0
|
HB2
|
B:ALA93
|
3.9
|
36.8
|
1.0
|
HG21
|
B:VAL220
|
4.1
|
36.2
|
1.0
|
H
|
B:PHE94
|
4.1
|
37.1
|
1.0
|
H7
|
B:HV6401
|
4.2
|
36.9
|
1.0
|
N
|
B:PHE94
|
4.3
|
37.1
|
1.0
|
HG22
|
B:VAL220
|
4.3
|
36.2
|
1.0
|
C11
|
B:HV6401
|
4.4
|
36.9
|
1.0
|
CG1
|
B:VAL220
|
4.4
|
36.2
|
1.0
|
HG13
|
B:VAL220
|
4.4
|
36.2
|
1.0
|
CA
|
B:ALA93
|
4.5
|
36.8
|
1.0
|
C
|
B:ALA93
|
4.5
|
36.8
|
1.0
|
HD12
|
B:ILE97
|
4.6
|
37.1
|
1.0
|
O21
|
B:HV6401
|
4.6
|
36.9
|
1.0
|
HG13
|
B:VAL54
|
4.6
|
35.7
|
1.0
|
HB2
|
B:PHE94
|
4.6
|
37.1
|
1.0
|
H
|
B:ALA93
|
4.6
|
36.8
|
1.0
|
HD2
|
B:PHE94
|
4.6
|
37.1
|
1.0
|
H9
|
B:HV6401
|
4.6
|
36.9
|
1.0
|
CG2
|
B:VAL220
|
4.6
|
36.2
|
1.0
|
CE1
|
B:PHE90
|
4.7
|
36.0
|
1.0
|
HA
|
B:PRO91
|
4.7
|
36.3
|
1.0
|
HA
|
B:PHE94
|
4.8
|
37.1
|
1.0
|
CG2
|
B:VAL54
|
4.8
|
35.7
|
1.0
|
HD22
|
B:LEU104
|
4.8
|
35.7
|
1.0
|
CG
|
B:PHE90
|
4.8
|
36.0
|
1.0
|
NE2
|
B:HIS230
|
4.9
|
34.7
|
1.0
|
HE2
|
B:PHE223
|
4.9
|
35.3
|
1.0
|
HG11
|
B:VAL54
|
4.9
|
35.7
|
1.0
|
O
|
B:PHE90
|
4.9
|
36.0
|
1.0
|
N
|
B:ALA93
|
4.9
|
36.8
|
1.0
|
HD11
|
B:ILE97
|
5.0
|
37.1
|
1.0
|
|
Fluorine binding site 8 out
of 25 in 7mxy
Go back to
Fluorine Binding Sites List in 7mxy
Fluorine binding site 8 out
of 25 in the Cryo-Em Structure of Pffnt-Inhibitor Complex
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Cryo-Em Structure of Pffnt-Inhibitor Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F401
b:36.9
occ:1.00
|
F18
|
B:HV6401
|
0.0
|
36.9
|
1.0
|
C15
|
B:HV6401
|
1.4
|
36.9
|
1.0
|
F16
|
B:HV6401
|
2.2
|
36.9
|
1.0
|
F17
|
B:HV6401
|
2.2
|
36.9
|
1.0
|
C14
|
B:HV6401
|
2.4
|
36.9
|
1.0
|
F19
|
B:HV6401
|
2.7
|
36.9
|
1.0
|
HG22
|
B:VAL54
|
2.7
|
35.7
|
1.0
|
HD22
|
B:LEU104
|
2.9
|
35.7
|
1.0
|
C12
|
B:HV6401
|
2.9
|
36.9
|
1.0
|
HD21
|
B:LEU104
|
3.1
|
35.7
|
1.0
|
O21
|
B:HV6401
|
3.2
|
36.9
|
1.0
|
CD2
|
B:LEU104
|
3.3
|
35.7
|
1.0
|
H9
|
B:HV6401
|
3.4
|
36.9
|
1.0
|
HG21
|
B:VAL54
|
3.4
|
35.7
|
1.0
|
NE2
|
B:HIS230
|
3.4
|
34.7
|
1.0
|
HE1
|
B:HIS230
|
3.4
|
34.7
|
1.0
|
HG11
|
B:VAL54
|
3.4
|
35.7
|
1.0
|
CG2
|
B:VAL54
|
3.4
|
35.7
|
1.0
|
HE2
|
B:PHE90
|
3.5
|
36.0
|
1.0
|
CE1
|
B:HIS230
|
3.5
|
34.7
|
1.0
|
F20
|
B:HV6401
|
3.5
|
36.9
|
1.0
|
HD23
|
B:LEU104
|
3.5
|
35.7
|
1.0
|
HZ
|
B:PHE90
|
3.6
|
36.0
|
1.0
|
HG13
|
B:VAL54
|
3.8
|
35.7
|
1.0
|
C11
|
B:HV6401
|
3.9
|
36.9
|
1.0
|
CG1
|
B:VAL54
|
4.0
|
35.7
|
1.0
|
HB3
|
B:ALA93
|
4.0
|
36.8
|
1.0
|
CE2
|
B:PHE90
|
4.1
|
36.0
|
1.0
|
HB1
|
B:ALA93
|
4.1
|
36.8
|
1.0
|
HG23
|
B:VAL54
|
4.1
|
35.7
|
1.0
|
CZ
|
B:PHE90
|
4.2
|
36.0
|
1.0
|
HD11
|
B:ILE97
|
4.2
|
37.1
|
1.0
|
H7
|
B:HV6401
|
4.2
|
36.9
|
1.0
|
CD2
|
B:HIS230
|
4.3
|
34.7
|
1.0
|
HD12
|
B:ILE97
|
4.3
|
37.1
|
1.0
|
CB
|
B:VAL54
|
4.3
|
35.7
|
1.0
|
ND1
|
B:HIS230
|
4.4
|
34.7
|
1.0
|
HD13
|
B:ILE97
|
4.5
|
37.1
|
1.0
|
CB
|
B:ALA93
|
4.5
|
36.8
|
1.0
|
CD1
|
B:ILE97
|
4.6
|
37.1
|
1.0
|
HB
|
B:ILE232
|
4.7
|
34.5
|
1.0
|
HD2
|
B:HIS230
|
4.7
|
34.7
|
1.0
|
HA
|
B:VAL54
|
4.8
|
35.7
|
1.0
|
CG
|
B:LEU104
|
4.8
|
35.7
|
1.0
|
HD13
|
B:LEU104
|
4.8
|
35.7
|
1.0
|
CG
|
B:HIS230
|
4.8
|
34.7
|
1.0
|
HB2
|
B:ALA233
|
4.8
|
34.4
|
1.0
|
HD1
|
B:HIS230
|
4.8
|
34.7
|
1.0
|
HG12
|
B:VAL54
|
4.9
|
35.7
|
1.0
|
C09
|
B:HV6401
|
5.0
|
36.9
|
1.0
|
|
Fluorine binding site 9 out
of 25 in 7mxy
Go back to
Fluorine Binding Sites List in 7mxy
Fluorine binding site 9 out
of 25 in the Cryo-Em Structure of Pffnt-Inhibitor Complex
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Cryo-Em Structure of Pffnt-Inhibitor Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F401
b:36.9
occ:1.00
|
F19
|
B:HV6401
|
0.0
|
36.9
|
1.0
|
C14
|
B:HV6401
|
1.4
|
36.9
|
1.0
|
F20
|
B:HV6401
|
2.2
|
36.9
|
1.0
|
C15
|
B:HV6401
|
2.4
|
36.9
|
1.0
|
C12
|
B:HV6401
|
2.4
|
36.9
|
1.0
|
H9
|
B:HV6401
|
2.4
|
36.9
|
1.0
|
F18
|
B:HV6401
|
2.7
|
36.9
|
1.0
|
HG22
|
B:VAL196
|
2.7
|
36.3
|
1.0
|
O21
|
B:HV6401
|
2.7
|
36.9
|
1.0
|
NE2
|
B:HIS230
|
2.8
|
34.7
|
1.0
|
F17
|
B:HV6401
|
2.8
|
36.9
|
1.0
|
HG21
|
B:VAL196
|
3.1
|
36.3
|
1.0
|
HD2
|
B:HIS230
|
3.1
|
34.7
|
1.0
|
CD2
|
B:HIS230
|
3.2
|
34.7
|
1.0
|
CG2
|
B:VAL196
|
3.3
|
36.3
|
1.0
|
F16
|
B:HV6401
|
3.5
|
36.9
|
1.0
|
C11
|
B:HV6401
|
3.5
|
36.9
|
1.0
|
HE2
|
B:PHE90
|
3.6
|
36.0
|
1.0
|
CE1
|
B:HIS230
|
3.8
|
34.7
|
1.0
|
HG22
|
B:VAL220
|
3.8
|
36.2
|
1.0
|
H7
|
B:HV6401
|
3.8
|
36.9
|
1.0
|
HG23
|
B:VAL196
|
3.9
|
36.3
|
1.0
|
HG11
|
B:VAL196
|
4.0
|
36.3
|
1.0
|
HE2
|
B:PHE223
|
4.1
|
35.3
|
1.0
|
HE1
|
B:HIS230
|
4.2
|
34.7
|
1.0
|
HG13
|
B:VAL196
|
4.3
|
36.3
|
1.0
|
HD2
|
B:PHE223
|
4.3
|
35.3
|
1.0
|
CG
|
B:HIS230
|
4.3
|
34.7
|
1.0
|
HD2
|
B:PHE94
|
4.3
|
37.1
|
1.0
|
HD22
|
B:LEU104
|
4.4
|
35.7
|
1.0
|
CG1
|
B:VAL196
|
4.4
|
36.3
|
1.0
|
CB
|
B:VAL196
|
4.5
|
36.3
|
1.0
|
HD23
|
B:LEU104
|
4.5
|
35.7
|
1.0
|
CE2
|
B:PHE90
|
4.5
|
36.0
|
1.0
|
HG21
|
B:VAL220
|
4.5
|
36.2
|
1.0
|
ND1
|
B:HIS230
|
4.6
|
34.7
|
1.0
|
HG11
|
B:VAL220
|
4.6
|
36.2
|
1.0
|
CE2
|
B:PHE223
|
4.6
|
35.3
|
1.0
|
CG2
|
B:VAL220
|
4.6
|
36.2
|
1.0
|
HG13
|
B:VAL220
|
4.6
|
36.2
|
1.0
|
CD2
|
B:PHE223
|
4.7
|
35.3
|
1.0
|
C09
|
B:HV6401
|
4.8
|
36.9
|
1.0
|
HA
|
B:VAL196
|
4.8
|
36.3
|
1.0
|
CD2
|
B:LEU104
|
4.8
|
35.7
|
1.0
|
O10
|
B:HV6401
|
4.9
|
36.9
|
1.0
|
HD21
|
B:LEU104
|
5.0
|
35.7
|
1.0
|
|
Fluorine binding site 10 out
of 25 in 7mxy
Go back to
Fluorine Binding Sites List in 7mxy
Fluorine binding site 10 out
of 25 in the Cryo-Em Structure of Pffnt-Inhibitor Complex
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 10 of Cryo-Em Structure of Pffnt-Inhibitor Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F401
b:36.9
occ:1.00
|
F20
|
B:HV6401
|
0.0
|
36.9
|
1.0
|
C14
|
B:HV6401
|
1.4
|
36.9
|
1.0
|
F19
|
B:HV6401
|
2.2
|
36.9
|
1.0
|
HD2
|
B:PHE94
|
2.3
|
37.1
|
1.0
|
C15
|
B:HV6401
|
2.4
|
36.9
|
1.0
|
C12
|
B:HV6401
|
2.4
|
36.9
|
1.0
|
H7
|
B:HV6401
|
2.5
|
36.9
|
1.0
|
F17
|
B:HV6401
|
2.6
|
36.9
|
1.0
|
C11
|
B:HV6401
|
2.8
|
36.9
|
1.0
|
F16
|
B:HV6401
|
2.8
|
36.9
|
1.0
|
HG22
|
B:VAL220
|
2.9
|
36.2
|
1.0
|
HG21
|
B:VAL220
|
3.0
|
36.2
|
1.0
|
CD2
|
B:PHE94
|
3.1
|
37.1
|
1.0
|
CG2
|
B:VAL220
|
3.4
|
36.2
|
1.0
|
HB2
|
B:PHE94
|
3.4
|
37.1
|
1.0
|
F18
|
B:HV6401
|
3.5
|
36.9
|
1.0
|
HG22
|
B:VAL196
|
3.6
|
36.3
|
1.0
|
O21
|
B:HV6401
|
3.6
|
36.9
|
1.0
|
H9
|
B:HV6401
|
3.7
|
36.9
|
1.0
|
HE2
|
B:PHE94
|
3.8
|
37.1
|
1.0
|
HG23
|
B:VAL220
|
3.9
|
36.2
|
1.0
|
CE2
|
B:PHE94
|
3.9
|
37.1
|
1.0
|
HA
|
B:PHE94
|
4.0
|
37.1
|
1.0
|
HG11
|
B:VAL220
|
4.0
|
36.2
|
1.0
|
CG
|
B:PHE94
|
4.0
|
37.1
|
1.0
|
CB
|
B:PHE94
|
4.1
|
37.1
|
1.0
|
C09
|
B:HV6401
|
4.2
|
36.9
|
1.0
|
H
|
B:PHE94
|
4.3
|
37.1
|
1.0
|
HG13
|
B:VAL196
|
4.3
|
36.3
|
1.0
|
CA
|
B:PHE94
|
4.4
|
37.1
|
1.0
|
H5
|
B:HV6401
|
4.4
|
36.9
|
1.0
|
N
|
B:PHE94
|
4.4
|
37.1
|
1.0
|
HE2
|
B:PHE90
|
4.5
|
36.0
|
1.0
|
HB3
|
B:ALA93
|
4.5
|
36.8
|
1.0
|
CG2
|
B:VAL196
|
4.5
|
36.3
|
1.0
|
CG1
|
B:VAL220
|
4.6
|
36.2
|
1.0
|
HG13
|
B:VAL220
|
4.6
|
36.2
|
1.0
|
CB
|
B:VAL220
|
4.6
|
36.2
|
1.0
|
HG21
|
B:VAL196
|
4.7
|
36.3
|
1.0
|
HD12
|
B:ILE97
|
4.8
|
37.1
|
1.0
|
HG11
|
B:VAL196
|
4.8
|
36.3
|
1.0
|
HA
|
B:VAL196
|
4.8
|
36.3
|
1.0
|
NE2
|
B:HIS230
|
4.9
|
34.7
|
1.0
|
O10
|
B:HV6401
|
4.9
|
36.9
|
1.0
|
HB3
|
B:PHE94
|
4.9
|
37.1
|
1.0
|
CG1
|
B:VAL196
|
5.0
|
36.3
|
1.0
|
HD22
|
B:LEU104
|
5.0
|
35.7
|
1.0
|
|
Reference:
M.Lyu,
C.Su,
J.W.Kazura,
E.W.Yu.
Structural Basis of Transport and Inhibition of the Plasmodium Falciparum Transporter Pffnt Embo Rep V. 22 51628 2021.
ISSN: ISSN 1469-221X
PubMed: 33471955
DOI: 10.15252/EMBR.202051628
Page generated: Fri Aug 2 09:51:29 2024
|