Fluorine in PDB 7n8r: Fgtgfg Segment From the Nucleoporin P54, Residues 63-68

The structure of Fgtgfg Segment From the Nucleoporin P54, Residues 63-68, PDB code: 7n8r was solved by M.P.Hughes, M.R.Sawaya, D.S.Eisenberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	22.06 / 1.20
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	15.71, 9.4, 23.26, 90, 108.52, 90
R / Rfree (%)	14.3 / 17.5

The binding sites of Fluorine atom in the Fgtgfg Segment From the Nucleoporin P54, Residues 63-68 (pdb code 7n8r). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 3 binding sites of Fluorine where determined in the Fgtgfg Segment From the Nucleoporin P54, Residues 63-68, PDB code: 7n8r:
Jump to Fluorine binding site number: 1; 2; 3;

Fluorine binding site 1 out of 3 in the Fgtgfg Segment From the Nucleoporin P54, Residues 63-68


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Fgtgfg Segment From the Nucleoporin P54, Residues 63-68 within 5.0Å range: probe atom residue distance (Å) B Occ B:F101 b:23.2 occ:1.00 F1 B:TFA101 0.0 23.2 1.0 C2 B:TFA101 1.3 14.2 1.0 F3 B:TFA101 2.0 23.8 1.0 F2 B:TFA101 2.0 20.3 1.0 C1 B:TFA101 2.3 10.5 1.0 O B:TFA101 2.6 8.3 1.0 OXT B:TFA101 3.4 8.8 1.0 CD1 A:PHE67 3.6 6.3 1.0 CE1 A:PHE67 3.9 8.0 1.0 O B:HOH201 4.0 8.9 1.0 CA A:GLY66 4.1 3.8 1.0 O A:THR65 4.3 4.1 1.0 CG2 A:THR65 4.3 5.9 1.0 N A:PHE67 4.5 3.5 1.0 N A:GLY66 4.6 3.6 1.0 C A:THR65 4.6 3.3 1.0 C A:GLY66 4.6 4.0 1.0 CG A:PHE67 4.9 5.8 1.0

Fluorine binding site 2 out of 3 in the Fgtgfg Segment From the Nucleoporin P54, Residues 63-68


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Fgtgfg Segment From the Nucleoporin P54, Residues 63-68 within 5.0Å range: probe atom residue distance (Å) B Occ B:F101 b:20.3 occ:1.00 F2 B:TFA101 0.0 20.3 1.0 C2 B:TFA101 1.3 14.2 1.0 F3 B:TFA101 2.0 23.8 1.0 F1 B:TFA101 2.0 23.2 1.0 C1 B:TFA101 2.4 10.5 1.0 OXT B:TFA101 2.7 8.8 1.0 O B:TFA101 3.3 8.3 1.0 CE1 A:PHE67 4.1 8.0 1.0 CD1 A:PHE67 4.5 6.3 1.0

Fluorine binding site 3 out of 3 in the Fgtgfg Segment From the Nucleoporin P54, Residues 63-68


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Fgtgfg Segment From the Nucleoporin P54, Residues 63-68 within 5.0Å range: probe atom residue distance (Å) B Occ B:F101 b:23.8 occ:1.00 F3 B:TFA101 0.0 23.8 1.0 C2 B:TFA101 1.2 14.2 1.0 F2 B:TFA101 2.0 20.3 1.0 F1 B:TFA101 2.0 23.2 1.0 C1 B:TFA101 2.3 10.5 1.0 OXT B:TFA101 2.9 8.8 1.0 O B:TFA101 3.0 8.3 1.0 O A:THR65 4.3 4.1 1.0 CG2 A:THR65 4.4 5.9 1.0 C A:THR65 5.0 3.3 1.0

K.A.Murray, D.Evans, M.P.Hughes, M.R.Sawaya, C.J.Hu, K.N.Houk, D.Eisenberg. Extended Beta-Strands Contribute to Reversible Amyloid Formation. Acs Nano V. 16 2154 2022.
ISSN: ESSN 1936-086X
PubMed: 35132852
DOI: 10.1021/ACSNANO.1C08043