Fluorine in PDB 7n91: P70 S6K1 in Complex with MSC2317067A-1

Enzymatic activity of P70 S6K1 in Complex with MSC2317067A-1

All present enzymatic activity of P70 S6K1 in Complex with MSC2317067A-1:
2.7.11.1;

Protein crystallography data

The structure of P70 S6K1 in Complex with MSC2317067A-1, PDB code: 7n91 was solved by I.Mochalkin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.52 / 3.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 59.3, 74.55, 150.03, 90, 90, 90
R / Rfree (%) n/a / n/a

Fluorine Binding Sites:

The binding sites of Fluorine atom in the P70 S6K1 in Complex with MSC2317067A-1 (pdb code 7n91). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the P70 S6K1 in Complex with MSC2317067A-1, PDB code: 7n91:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 7n91

Go back to Fluorine Binding Sites List in 7n91
Fluorine binding site 1 out of 2 in the P70 S6K1 in Complex with MSC2317067A-1


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of P70 S6K1 in Complex with MSC2317067A-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F501

b:50.5
occ:1.00
F25 A:1RJ501 0.0 50.5 1.0
C3 A:1RJ501 1.3 48.3 1.0
C2 A:1RJ501 2.4 48.2 1.0
C4 A:1RJ501 2.4 49.4 1.0
O A:GLY103 3.0 51.7 1.0
N A:GLY100 3.2 67.3 1.0
C A:LYS104 3.4 44.6 1.0
CA A:LYS104 3.4 46.1 1.0
O A:GLY98 3.5 59.5 1.0
N A:VAL105 3.5 42.2 1.0
C A:GLY103 3.6 52.5 1.0
C1 A:1RJ501 3.7 46.7 1.0
C5 A:1RJ501 3.7 48.0 1.0
N A:LYS104 3.8 49.5 1.0
CG2 A:VAL105 3.8 41.6 1.0
C A:LYS99 3.8 65.7 1.0
C A:GLY98 3.8 58.3 1.0
CA A:GLY100 3.9 66.7 1.0
CA A:LYS99 4.0 64.4 1.0
O A:LYS104 4.0 43.4 1.0
N A:LYS99 4.0 61.2 1.0
C6 A:1RJ501 4.2 46.5 1.0
CB A:VAL105 4.4 40.5 1.0
CA A:VAL105 4.5 40.5 1.0
O A:LYS99 4.7 67.1 1.0
CA A:GLY98 4.7 55.5 1.0
CA A:GLY103 4.8 56.1 1.0
CB A:LYS104 4.8 47.3 1.0
C21 A:1RJ501 4.9 46.6 1.0
N20 A:1RJ501 4.9 44.7 1.0

Fluorine binding site 2 out of 2 in 7n91

Go back to Fluorine Binding Sites List in 7n91
Fluorine binding site 2 out of 2 in the P70 S6K1 in Complex with MSC2317067A-1


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of P70 S6K1 in Complex with MSC2317067A-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F501

b:53.3
occ:1.00
F25 B:1RJ501 0.0 53.3 1.0
C3 B:1RJ501 1.4 53.4 1.0
C4 B:1RJ501 2.4 54.1 1.0
C2 B:1RJ501 2.4 52.9 1.0
N B:GLY100 2.8 59.1 1.0
C B:LYS99 2.9 58.0 1.0
O B:LYS99 3.3 57.4 1.0
O B:GLY98 3.4 51.4 1.0
CA B:LYS99 3.4 57.4 1.0
CA B:GLY100 3.4 60.3 1.0
O B:GLY103 3.4 53.8 1.0
N B:LYS99 3.6 54.8 1.0
C B:GLY98 3.6 51.6 1.0
C5 B:1RJ501 3.7 52.3 1.0
C1 B:1RJ501 3.7 49.6 1.0
CG2 B:VAL105 3.8 43.2 1.0
CA B:LYS104 3.8 50.2 1.0
N B:VAL105 3.9 45.6 1.0
C B:LYS104 4.0 47.0 1.0
C B:GLY103 4.0 54.1 1.0
C6 B:1RJ501 4.2 50.9 1.0
N B:LYS104 4.2 52.6 1.0
CB B:VAL105 4.6 43.7 1.0
C B:GLY100 4.7 61.4 1.0
O B:LYS104 4.7 45.3 1.0
CA B:GLY98 4.7 48.4 1.0
CA B:VAL105 4.8 44.1 1.0
CB B:LYS99 4.9 59.6 1.0
C21 B:1RJ501 5.0 47.6 1.0

Reference:

L.Deselm, B.Huck, R.Lan, C.Neagu, J.Potnick, Y.Xiao, X.Chen, R.Jones, T.E.Richardson, B.H.Heasley, T.Haxell, J.Moore, H.Tian, K.Georgi, F.Rohdich, A.Sutton, T.Johnson, I.Mochalkin, J.Jackson, J.Lin, L.Crowley, A.Machl, A.Clark, E.Wilker, B.Sherer, A.Goutopoulos. Identification of Clinical Candidate M2698, A Dual P70S6K and Akt Inhibitor, For Treatment of Pam Pathway-Altered Cancers. J.Med.Chem. V. 64 14603 2021.
ISSN: ISSN 0022-2623
PubMed: 34596404
DOI: 10.1021/ACS.JMEDCHEM.1C01087
Page generated: Fri Aug 2 10:01:21 2024

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