Fluorine in PDB 7q85: Crystal Structure of Human Sting in Complex with MD1193

Protein crystallography data

The structure of Crystal Structure of Human Sting in Complex with MD1193, PDB code: 7q85 was solved by M.Smola, M.Klima, E.Boura, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.46 / 2.36
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 111.034, 111.034, 35.091, 90, 90, 90
R / Rfree (%) 22.7 / 25.2

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Human Sting in Complex with MD1193 (pdb code 7q85). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Crystal Structure of Human Sting in Complex with MD1193, PDB code: 7q85:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 7q85

Go back to Fluorine Binding Sites List in 7q85
Fluorine binding site 1 out of 2 in the Crystal Structure of Human Sting in Complex with MD1193


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Human Sting in Complex with MD1193 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F401

b:39.4
occ:0.50
F1 A:98F401 0.0 39.4 0.5
C16 A:98F401 1.4 43.2 0.5
C17 A:98F401 2.2 43.1 0.5
C15 A:98F401 2.4 41.5 0.5
O5 A:98F401 2.8 40.1 0.5
C18 A:98F401 2.8 41.4 0.5
O7 A:98F401 2.9 44.8 0.5
CD A:PRO264 3.0 38.9 1.0
CD1 A:TYR163 3.1 41.4 1.0
CG A:PRO264 3.3 39.3 1.0
O A:HOH501 3.4 39.2 1.0
CE1 A:TYR163 3.4 41.5 1.0
N6 A:98F401 3.6 42.0 0.5
CB A:THR263 3.6 45.7 1.0
N A:PRO264 3.9 37.7 1.0
OG1 A:THR263 4.0 42.3 1.0
P A:98F401 4.2 37.3 0.5
C19 A:98F401 4.3 40.4 0.5
C11 A:98F401 4.3 40.4 0.5
CG A:TYR163 4.3 40.2 1.0
CA A:THR263 4.3 41.2 1.0
N5 A:98F401 4.4 43.3 0.5
N A:THR263 4.4 45.4 1.0
O A:98F401 4.4 38.0 0.5
C A:THR263 4.5 41.8 1.0
CG2 A:THR263 4.5 36.1 1.0
CB A:PRO264 4.6 38.5 1.0
C14 A:98F401 4.6 40.8 0.5
CZ A:TYR163 4.7 39.8 1.0
O3 A:98F401 4.7 41.5 0.5
CA A:PRO264 4.8 36.3 1.0
CB A:TYR163 4.8 35.0 1.0
CA A:TYR163 4.9 37.3 1.0

Fluorine binding site 2 out of 2 in 7q85

Go back to Fluorine Binding Sites List in 7q85
Fluorine binding site 2 out of 2 in the Crystal Structure of Human Sting in Complex with MD1193


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Crystal Structure of Human Sting in Complex with MD1193 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F401

b:42.4
occ:0.50
F2 A:98F401 0.0 42.4 0.5
C6 A:98F401 1.4 42.7 0.5
C7 A:98F401 2.2 43.4 0.5
C5 A:98F401 2.5 42.0 0.5
O10 A:98F401 2.6 47.5 0.5
C8 A:98F401 3.1 41.4 0.5
O1 A:98F401 3.2 40.4 0.5
N2 A:98F401 3.3 41.9 0.5
O4 A:98F401 3.6 37.6 0.5
N1 A:98F401 3.7 43.1 0.5
P1 A:98F401 3.7 45.4 0.5
C1 A:98F401 3.8 40.5 0.5
C4 A:98F401 4.5 40.9 0.5
C9 A:98F401 4.6 40.9 0.5
O22 A:98F401 4.6 39.5 0.5
NH1 A:ARG238 4.6 42.0 1.0
C A:98F401 4.9 44.1 0.5
NH2 A:ARG238 4.9 44.5 1.0

Reference:

M.Smola, M.Klima, E.Boura. Crystal Structure of Human Sting in Complex with MD1193 To Be Published.
Page generated: Wed Apr 5 00:38:12 2023

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