Fluorine in PDB 7rhn: Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir

Protein crystallography data

The structure of Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir, PDB code: 7rhn was solved by S.M.Bester, M.Kvaratskhelia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.48 / 2.46
Space group P 6
Cell size a, b, c (Å), α, β, γ (°) 89.73, 89.73, 56.092, 90, 90, 120
R / Rfree (%) 24.2 / 28.8

Other elements in 7rhn:

The structure of Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir also contains other interesting chemical elements:

Iodine (I) 3 atoms
Chlorine (Cl) 6 atoms

Fluorine Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20;

Binding sites:

The binding sites of Fluorine atom in the Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir (pdb code 7rhn). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 20 binding sites of Fluorine where determined in the Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir, PDB code: 7rhn:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Fluorine binding site 1 out of 20 in 7rhn

Go back to Fluorine Binding Sites List in 7rhn
Fluorine binding site 1 out of 20 in the Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F301

b:55.9
occ:0.72
F26 C:QNG301 0.0 55.9 0.7
F26 C:QNG301 0.0 55.4 0.3
C24 C:QNG301 1.4 50.4 0.7
C24 C:QNG301 1.4 50.4 0.3
C25 C:QNG301 2.4 50.4 0.7
C23 C:QNG301 2.4 46.5 0.7
C25 C:QNG301 2.4 50.5 0.3
C23 C:QNG301 2.4 46.5 0.3
N C:LYS70 3.1 37.4 1.0
CG C:LYS70 3.2 46.7 1.0
CD1 C:ILE73 3.2 35.8 1.0
CA C:LYS70 3.3 38.1 1.0
C C:LEU69 3.4 37.5 1.0
CG C:LEU69 3.5 45.1 1.0
CB C:LEU69 3.5 38.5 1.0
O C:MET66 3.6 45.2 1.0
C20 C:QNG301 3.7 52.8 0.7
C22 C:QNG301 3.7 47.0 0.7
C20 C:QNG301 3.7 52.6 0.3
C22 C:QNG301 3.7 47.4 0.3
CB C:LYS70 3.7 42.8 1.0
O C:LEU69 3.8 37.7 1.0
CD2 C:LEU69 4.0 36.7 1.0
CA C:LEU69 4.0 35.8 1.0
C21 C:QNG301 4.2 51.4 0.7
C21 C:QNG301 4.2 51.4 0.3
CD1 C:LEU56 4.3 36.4 1.0
CG1 C:ILE73 4.4 33.0 1.0
CD C:LYS70 4.5 53.7 1.0
F42 C:QNG301 4.6 55.4 0.3
F42 C:QNG301 4.6 57.4 0.7
C11 C:QNG301 4.7 57.2 0.3
C11 C:QNG301 4.7 57.3 0.7
C C:LYS70 4.7 38.4 1.0
C C:MET66 4.7 41.0 1.0
CD1 C:LEU69 4.8 35.9 1.0
F27 C:QNG301 4.8 51.6 0.7
F27 C:QNG301 4.8 51.4 0.3
CB C:ILE73 4.8 38.5 1.0
N C:LEU69 4.9 34.9 1.0
C19 C:QNG301 5.0 50.8 0.7
C19 C:QNG301 5.0 50.8 0.3
C10 C:QNG301 5.0 61.4 0.7

Fluorine binding site 2 out of 20 in 7rhn

Go back to Fluorine Binding Sites List in 7rhn
Fluorine binding site 2 out of 20 in the Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F301

b:55.4
occ:0.28
F26 C:QNG301 0.0 55.4 0.3
F26 C:QNG301 0.0 55.9 0.7
C24 C:QNG301 1.4 50.4 0.7
C24 C:QNG301 1.4 50.4 0.3
C23 C:QNG301 2.4 46.5 0.7
C25 C:QNG301 2.4 50.4 0.7
C23 C:QNG301 2.4 46.5 0.3
C25 C:QNG301 2.4 50.5 0.3
N C:LYS70 3.1 37.4 1.0
CG C:LYS70 3.2 46.7 1.0
CD1 C:ILE73 3.2 35.8 1.0
CA C:LYS70 3.3 38.1 1.0
C C:LEU69 3.4 37.5 1.0
CG C:LEU69 3.5 45.1 1.0
CB C:LEU69 3.5 38.5 1.0
O C:MET66 3.6 45.2 1.0
C22 C:QNG301 3.7 47.0 0.7
C20 C:QNG301 3.7 52.8 0.7
C22 C:QNG301 3.7 47.4 0.3
C20 C:QNG301 3.7 52.6 0.3
CB C:LYS70 3.7 42.8 1.0
O C:LEU69 3.8 37.7 1.0
CD2 C:LEU69 4.0 36.7 1.0
CA C:LEU69 4.0 35.8 1.0
C21 C:QNG301 4.1 51.4 0.7
C21 C:QNG301 4.2 51.4 0.3
CD1 C:LEU56 4.3 36.4 1.0
CG1 C:ILE73 4.4 33.0 1.0
CD C:LYS70 4.5 53.7 1.0
F42 C:QNG301 4.6 55.4 0.3
F42 C:QNG301 4.6 57.4 0.7
C11 C:QNG301 4.7 57.2 0.3
C11 C:QNG301 4.7 57.3 0.7
C C:MET66 4.7 41.0 1.0
C C:LYS70 4.7 38.4 1.0
F27 C:QNG301 4.8 51.6 0.7
F27 C:QNG301 4.8 51.4 0.3
CD1 C:LEU69 4.8 35.9 1.0
CB C:ILE73 4.9 38.5 1.0
N C:LEU69 4.9 34.9 1.0
C19 C:QNG301 5.0 50.8 0.7
C19 C:QNG301 5.0 50.8 0.3
C10 C:QNG301 5.0 61.4 0.7

Fluorine binding site 3 out of 20 in 7rhn

Go back to Fluorine Binding Sites List in 7rhn
Fluorine binding site 3 out of 20 in the Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F301

b:51.6
occ:0.72
F27 C:QNG301 0.0 51.6 0.7
F27 C:QNG301 0.1 51.4 0.3
C22 C:QNG301 1.4 47.4 0.3
C22 C:QNG301 1.4 47.0 0.7
C21 C:QNG301 2.4 51.4 0.7
C21 C:QNG301 2.4 51.4 0.3
C23 C:QNG301 2.4 46.5 0.3
C23 C:QNG301 2.4 46.5 0.7
F41 C:QNG301 2.9 51.1 0.3
F41 C:QNG301 3.0 51.1 0.7
CB C:MET66 3.0 36.0 1.0
O C:HOH402 3.1 29.6 1.0
CG C:MET66 3.1 38.7 1.0
SD C:MET66 3.4 40.0 1.0
O C:LEU56 3.5 34.8 1.0
F42 C:QNG301 3.6 57.4 0.7
C38 C:QNG301 3.6 53.6 0.3
C20 C:QNG301 3.7 52.8 0.7
C20 C:QNG301 3.7 52.6 0.3
C24 C:QNG301 3.7 50.4 0.3
C24 C:QNG301 3.7 50.4 0.7
F42 C:QNG301 3.7 55.4 0.3
C37 C:QNG301 3.7 50.1 0.3
C38 C:QNG301 3.8 52.9 0.7
CB C:LEU56 3.9 41.6 1.0
C C:LEU56 4.0 34.6 1.0
CA C:MET66 4.0 38.8 1.0
C25 C:QNG301 4.2 50.5 0.3
C25 C:QNG301 4.2 50.4 0.7
C37 C:QNG301 4.3 49.7 0.7
OD1 C:ASN57 4.4 44.5 1.0
CA C:LEU56 4.4 36.7 1.0
O C:MET66 4.5 45.2 1.0
C C:MET66 4.6 41.0 1.0
N C:ASN57 4.6 30.5 1.0
C39 C:QNG301 4.7 47.4 0.3
F26 C:QNG301 4.8 55.4 0.3
F26 C:QNG301 4.8 55.9 0.7
CA C:ASN57 4.9 36.7 1.0
C19 C:QNG301 4.9 50.8 0.7
C19 C:QNG301 4.9 50.8 0.3
CG C:LEU56 5.0 37.0 1.0

Fluorine binding site 4 out of 20 in 7rhn

Go back to Fluorine Binding Sites List in 7rhn
Fluorine binding site 4 out of 20 in the Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F301

b:51.4
occ:0.28
F27 C:QNG301 0.0 51.4 0.3
F27 C:QNG301 0.1 51.6 0.7
C22 C:QNG301 1.4 47.4 0.3
C22 C:QNG301 1.4 47.0 0.7
C21 C:QNG301 2.4 51.4 0.7
C21 C:QNG301 2.4 51.4 0.3
C23 C:QNG301 2.4 46.5 0.3
C23 C:QNG301 2.4 46.5 0.7
F41 C:QNG301 3.0 51.1 0.3
O C:HOH402 3.0 29.6 1.0
F41 C:QNG301 3.0 51.1 0.7
CB C:MET66 3.1 36.0 1.0
CG C:MET66 3.2 38.7 1.0
SD C:MET66 3.4 40.0 1.0
O C:LEU56 3.5 34.8 1.0
C20 C:QNG301 3.6 52.8 0.7
F42 C:QNG301 3.7 57.4 0.7
C20 C:QNG301 3.7 52.6 0.3
C24 C:QNG301 3.7 50.4 0.3
C38 C:QNG301 3.7 53.6 0.3
C24 C:QNG301 3.7 50.4 0.7
F42 C:QNG301 3.8 55.4 0.3
C37 C:QNG301 3.8 50.1 0.3
C38 C:QNG301 3.8 52.9 0.7
CB C:LEU56 3.8 41.6 1.0
C C:LEU56 3.9 34.6 1.0
CA C:MET66 4.1 38.8 1.0
C25 C:QNG301 4.2 50.5 0.3
C25 C:QNG301 4.2 50.4 0.7
C37 C:QNG301 4.4 49.7 0.7
CA C:LEU56 4.4 36.7 1.0
OD1 C:ASN57 4.4 44.5 1.0
O C:MET66 4.5 45.2 1.0
N C:ASN57 4.6 30.5 1.0
C C:MET66 4.7 41.0 1.0
C39 C:QNG301 4.7 47.4 0.3
F26 C:QNG301 4.8 55.4 0.3
F26 C:QNG301 4.8 55.9 0.7
CA C:ASN57 4.8 36.7 1.0
C19 C:QNG301 4.9 50.8 0.7
C19 C:QNG301 4.9 50.8 0.3
CG C:LEU56 4.9 37.0 1.0

Fluorine binding site 5 out of 20 in 7rhn

Go back to Fluorine Binding Sites List in 7rhn
Fluorine binding site 5 out of 20 in the Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F301

b:51.1
occ:0.72
F41 C:QNG301 0.0 51.1 0.7
F41 C:QNG301 0.8 51.1 0.3
C38 C:QNG301 1.3 53.6 0.3
C38 C:QNG301 1.4 52.9 0.7
C37 C:QNG301 1.7 50.1 0.3
F42 C:QNG301 2.2 57.4 0.7
C37 C:QNG301 2.3 49.7 0.7
C32 C:QNG301 2.4 53.8 0.7
C32 C:QNG301 2.4 53.4 0.3
F42 C:QNG301 2.4 55.4 0.3
C39 C:QNG301 2.7 47.4 0.3
C36 C:QNG301 2.9 51.1 0.3
F27 C:QNG301 3.0 51.6 0.7
F27 C:QNG301 3.0 51.4 0.3
C31 C:QNG301 3.1 54.4 0.3
N33 C:QNG301 3.2 54.6 0.7
C22 C:QNG301 3.4 47.0 0.7
C39 C:QNG301 3.4 45.6 0.7
C22 C:QNG301 3.4 47.4 0.3
C31 C:QNG301 3.4 55.8 0.7
N33 C:QNG301 3.4 54.3 0.3
C36 C:QNG301 3.5 51.0 0.7
C30 C:QNG301 3.5 54.7 0.7
C21 C:QNG301 3.6 51.4 0.7
C21 C:QNG301 3.6 51.4 0.3
OE1 C:GLN63 3.6 38.8 1.0
C28 C:QNG301 3.9 58.1 0.7
O C:HOH402 3.9 29.6 1.0
C30 C:QNG301 3.9 54.8 0.3
CB C:MET66 4.0 36.0 1.0
C28 C:QNG301 4.2 57.4 0.3
C23 C:QNG301 4.3 46.5 0.7
C23 C:QNG301 4.3 46.5 0.3
N43 C:QNG301 4.3 54.8 0.7
O29 C:QNG301 4.3 59.9 0.7
C35 C:QNG301 4.3 51.3 0.3
OD1 C:ASN57 4.4 44.5 1.0
N43 C:QNG301 4.4 54.7 0.3
N34 C:QNG301 4.4 55.5 0.7
N34 C:QNG301 4.5 55.1 0.3
C35 C:QNG301 4.5 51.1 0.7
CD C:GLN63 4.5 39.3 1.0
C20 C:QNG301 4.6 52.8 0.7
C20 C:QNG301 4.6 52.6 0.3
CG C:MET66 4.6 38.7 1.0
O29 C:QNG301 4.7 59.3 0.3
NE2 C:GLN63 4.7 34.1 1.0

Fluorine binding site 6 out of 20 in 7rhn

Go back to Fluorine Binding Sites List in 7rhn
Fluorine binding site 6 out of 20 in the Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F301

b:51.1
occ:0.28
F41 C:QNG301 0.0 51.1 0.3
F41 C:QNG301 0.8 51.1 0.7
C38 C:QNG301 1.4 53.6 0.3
C38 C:QNG301 1.8 52.9 0.7
F42 C:QNG301 2.3 55.4 0.3
F42 C:QNG301 2.3 57.4 0.7
C37 C:QNG301 2.3 50.1 0.3
C32 C:QNG301 2.4 53.4 0.3
C32 C:QNG301 2.6 53.8 0.7
F27 C:QNG301 2.9 51.6 0.7
F27 C:QNG301 3.0 51.4 0.3
C21 C:QNG301 3.0 51.4 0.7
C21 C:QNG301 3.0 51.4 0.3
C37 C:QNG301 3.0 49.7 0.7
C30 C:QNG301 3.1 54.7 0.7
C22 C:QNG301 3.1 47.0 0.7
N33 C:QNG301 3.1 54.6 0.7
C22 C:QNG301 3.1 47.4 0.3
N33 C:QNG301 3.3 54.3 0.3
C28 C:QNG301 3.3 58.1 0.7
C39 C:QNG301 3.5 47.4 0.3
C30 C:QNG301 3.5 54.8 0.3
C31 C:QNG301 3.5 54.4 0.3
C36 C:QNG301 3.5 51.1 0.3
OD1 C:ASN57 3.6 44.5 1.0
N43 C:QNG301 3.6 54.8 0.7
C28 C:QNG301 3.6 57.4 0.3
N43 C:QNG301 3.7 54.7 0.3
C31 C:QNG301 3.8 55.8 0.7
O C:HOH402 3.9 29.6 1.0
O29 C:QNG301 3.9 59.9 0.7
C20 C:QNG301 4.0 52.8 0.7
C20 C:QNG301 4.0 52.6 0.3
C36 C:QNG301 4.1 51.0 0.7
C23 C:QNG301 4.2 46.5 0.7
C23 C:QNG301 4.2 46.5 0.3
C39 C:QNG301 4.2 45.6 0.7
O29 C:QNG301 4.2 59.3 0.3
OE1 C:GLN63 4.3 38.8 1.0
N34 C:QNG301 4.5 55.5 0.7
N34 C:QNG301 4.5 55.1 0.3
CB C:MET66 4.5 36.0 1.0
C01 C:QNG301 4.6 55.1 0.7
C01 C:QNG301 4.6 55.0 0.3
C35 C:QNG301 4.6 51.3 0.3
C19 C:QNG301 4.7 50.8 0.7
C19 C:QNG301 4.7 50.8 0.3
CG C:ASN57 4.7 44.2 1.0
C35 C:QNG301 4.8 51.1 0.7
C25 C:QNG301 4.8 50.5 0.3
C25 C:QNG301 4.9 50.4 0.7
C24 C:QNG301 4.9 50.4 0.3
C24 C:QNG301 4.9 50.4 0.7
CA C:ASN57 5.0 36.7 1.0

Fluorine binding site 7 out of 20 in 7rhn

Go back to Fluorine Binding Sites List in 7rhn
Fluorine binding site 7 out of 20 in the Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 7 of Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F301

b:57.4
occ:0.72
F42 C:QNG301 0.0 57.4 0.7
F42 C:QNG301 0.6 55.4 0.3
C38 C:QNG301 1.2 53.6 0.3
C38 C:QNG301 1.4 52.9 0.7
C37 C:QNG301 1.8 50.1 0.3
F41 C:QNG301 2.2 51.1 0.7
F41 C:QNG301 2.3 51.1 0.3
C37 C:QNG301 2.4 49.7 0.7
C32 C:QNG301 2.4 53.4 0.3
C32 C:QNG301 2.4 53.8 0.7
C36 C:QNG301 2.7 51.1 0.3
CD C:LYS70 3.0 53.7 1.0
C31 C:QNG301 3.1 54.4 0.3
O29 C:QNG301 3.1 59.9 0.7
C22 C:QNG301 3.1 47.0 0.7
C22 C:QNG301 3.2 47.4 0.3
C21 C:QNG301 3.2 51.4 0.7
C28 C:QNG301 3.3 58.1 0.7
C21 C:QNG301 3.3 51.4 0.3
C39 C:QNG301 3.3 47.4 0.3
C36 C:QNG301 3.3 51.0 0.7
N33 C:QNG301 3.3 54.6 0.7
C31 C:QNG301 3.3 55.8 0.7
C23 C:QNG301 3.4 46.5 0.7
C23 C:QNG301 3.4 46.5 0.3
NZ C:LYS70 3.4 62.9 1.0
CG C:LYS70 3.5 46.7 1.0
CE C:LYS70 3.5 64.8 1.0
N33 C:QNG301 3.5 54.3 0.3
O29 C:QNG301 3.6 59.3 0.3
C28 C:QNG301 3.6 57.4 0.3
F27 C:QNG301 3.6 51.6 0.7
C20 C:QNG301 3.6 52.8 0.7
C20 C:QNG301 3.6 52.6 0.3
F27 C:QNG301 3.7 51.4 0.3
C30 C:QNG301 3.7 54.7 0.7
C24 C:QNG301 3.8 50.4 0.3
C24 C:QNG301 3.8 50.4 0.7
C25 C:QNG301 3.9 50.5 0.3
N43 C:QNG301 3.9 54.8 0.7
C25 C:QNG301 3.9 50.4 0.7
C39 C:QNG301 3.9 45.6 0.7
N43 C:QNG301 3.9 54.7 0.3
C30 C:QNG301 4.1 54.8 0.3
O C:MET66 4.2 45.2 1.0
C01 C:QNG301 4.3 55.0 0.3
C01 C:QNG301 4.3 55.1 0.7
C35 C:QNG301 4.3 51.3 0.3
N34 C:QNG301 4.5 55.5 0.7
C35 C:QNG301 4.5 51.1 0.7
N34 C:QNG301 4.5 55.1 0.3
CB C:MET66 4.5 36.0 1.0
C19 C:QNG301 4.5 50.8 0.7
C19 C:QNG301 4.5 50.8 0.3
F26 C:QNG301 4.6 55.4 0.3
F26 C:QNG301 4.6 55.9 0.7
C C:MET66 4.7 41.0 1.0
OD1 C:ASN57 4.9 44.5 1.0
CB C:LYS70 5.0 42.8 1.0

Fluorine binding site 8 out of 20 in 7rhn

Go back to Fluorine Binding Sites List in 7rhn
Fluorine binding site 8 out of 20 in the Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 8 of Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F301

b:55.4
occ:0.28
F42 C:QNG301 0.0 55.4 0.3
F42 C:QNG301 0.6 57.4 0.7
C38 C:QNG301 1.4 53.6 0.3
C38 C:QNG301 1.8 52.9 0.7
F41 C:QNG301 2.3 51.1 0.3
C37 C:QNG301 2.3 50.1 0.3
C32 C:QNG301 2.4 53.4 0.3
F41 C:QNG301 2.4 51.1 0.7
C32 C:QNG301 2.5 53.8 0.7
O29 C:QNG301 2.7 59.9 0.7
C28 C:QNG301 2.8 58.1 0.7
C37 C:QNG301 2.9 49.7 0.7
C21 C:QNG301 2.9 51.4 0.7
C21 C:QNG301 3.0 51.4 0.3
C28 C:QNG301 3.1 57.4 0.3
C22 C:QNG301 3.1 47.0 0.7
O29 C:QNG301 3.1 59.3 0.3
C22 C:QNG301 3.1 47.4 0.3
C20 C:QNG301 3.2 52.8 0.7
C36 C:QNG301 3.2 51.1 0.3
C20 C:QNG301 3.2 52.6 0.3
N33 C:QNG301 3.2 54.6 0.7
CD C:LYS70 3.2 53.7 1.0
N43 C:QNG301 3.3 54.8 0.7
C31 C:QNG301 3.3 54.4 0.3
N33 C:QNG301 3.4 54.3 0.3
N43 C:QNG301 3.4 54.7 0.3
C30 C:QNG301 3.4 54.7 0.7
NZ C:LYS70 3.4 62.9 1.0
C23 C:QNG301 3.4 46.5 0.7
C23 C:QNG301 3.5 46.5 0.3
CE C:LYS70 3.5 64.8 1.0
C25 C:QNG301 3.5 50.5 0.3
C25 C:QNG301 3.5 50.4 0.7
C31 C:QNG301 3.6 55.8 0.7
CG C:LYS70 3.6 46.7 1.0
C24 C:QNG301 3.7 50.4 0.3
C24 C:QNG301 3.7 50.4 0.7
C01 C:QNG301 3.7 55.0 0.3
C01 C:QNG301 3.7 55.1 0.7
F27 C:QNG301 3.7 51.6 0.7
C30 C:QNG301 3.7 54.8 0.3
F27 C:QNG301 3.8 51.4 0.3
C36 C:QNG301 3.8 51.0 0.7
C39 C:QNG301 3.8 47.4 0.3
C19 C:QNG301 4.0 50.8 0.7
C19 C:QNG301 4.0 50.8 0.3
C39 C:QNG301 4.4 45.6 0.7
N34 C:QNG301 4.4 55.5 0.7
C35 C:QNG301 4.5 51.3 0.3
N34 C:QNG301 4.5 55.1 0.3
OD1 C:ASN57 4.5 44.5 1.0
F26 C:QNG301 4.6 55.4 0.3
C35 C:QNG301 4.6 51.1 0.7
F26 C:QNG301 4.6 55.9 0.7
O C:MET66 4.6 45.2 1.0
CB C:MET66 5.0 36.0 1.0

Fluorine binding site 9 out of 20 in 7rhn

Go back to Fluorine Binding Sites List in 7rhn
Fluorine binding site 9 out of 20 in the Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 9 of Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F301

b:50.3
occ:0.72
F52 C:QNG301 0.0 50.3 0.7
F52 C:QNG301 0.3 50.0 0.3
C40 C:QNG301 1.4 46.8 0.7
C40 C:QNG301 1.5 47.2 0.3
F53 C:QNG301 2.1 50.1 0.3
F64 C:QNG301 2.2 44.3 0.7
F53 C:QNG301 2.2 50.2 0.7
F64 C:QNG301 2.3 44.6 0.3
C35 C:QNG301 2.4 51.1 0.7
C35 C:QNG301 2.6 51.3 0.3
C31 C:QNG301 3.0 55.8 0.7
NE2 C:HIS67 3.2 45.4 0.3
C31 C:QNG301 3.3 54.4 0.3
CE1 C:HIS67 3.5 46.4 0.3
N34 C:QNG301 3.5 55.5 0.7
C36 C:QNG301 3.6 51.0 0.7
N34 C:QNG301 3.7 55.1 0.3
C36 C:QNG301 4.0 51.1 0.3
NZ C:LYS70 4.2 62.9 1.0
C32 C:QNG301 4.3 53.8 0.7
CD2 C:HIS67 4.5 44.0 0.3
N33 C:QNG301 4.5 54.6 0.7
C32 C:QNG301 4.6 53.4 0.3
N33 C:QNG301 4.7 54.3 0.3
ND1 C:HIS67 4.7 45.1 0.3
CD2 C:HIS67 4.8 44.5 0.7
C39 C:QNG301 4.8 45.6 0.7

Fluorine binding site 10 out of 20 in 7rhn

Go back to Fluorine Binding Sites List in 7rhn
Fluorine binding site 10 out of 20 in the Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 10 of Co-Crystal Structure of Q67H Mutant of Disulfide Stabilized Hiv-1 Ca Hexamer and Lenacapavir within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F301

b:50.0
occ:0.28
F52 C:QNG301 0.0 50.0 0.3
F52 C:QNG301 0.3 50.3 0.7
C40 C:QNG301 1.3 46.8 0.7
C40 C:QNG301 1.4 47.2 0.3
F64 C:QNG301 2.2 44.3 0.7
C35 C:QNG301 2.2 51.1 0.7
F53 C:QNG301 2.2 50.1 0.3
F64 C:QNG301 2.2 44.6 0.3
F53 C:QNG301 2.4 50.2 0.7
C35 C:QNG301 2.4 51.3 0.3
C31 C:QNG301 2.7 55.8 0.7
C31 C:QNG301 3.1 54.4 0.3
NE2 C:HIS67 3.1 45.4 0.3
C36 C:QNG301 3.3 51.0 0.7
CE1 C:HIS67 3.3 46.4 0.3
N34 C:QNG301 3.4 55.5 0.7
N34 C:QNG301 3.5 55.1 0.3
C36 C:QNG301 3.6 51.1 0.3
C32 C:QNG301 4.0 53.8 0.7
NZ C:LYS70 4.1 62.9 1.0
N33 C:QNG301 4.3 54.6 0.7
CD2 C:HIS67 4.3 44.0 0.3
C32 C:QNG301 4.3 53.4 0.3
ND1 C:HIS67 4.5 45.1 0.3
C39 C:QNG301 4.5 45.6 0.7
N33 C:QNG301 4.5 54.3 0.3
CD2 C:HIS67 4.7 44.5 0.7
C37 C:QNG301 4.7 49.7 0.7
C39 C:QNG301 4.8 47.4 0.3

Reference:

S.M.Bester, D.Adu-Ampratwum, A.S.Annamalai, G.Wei, L.Briganti, B.C.Murphy, R.Haney, J.R.Fuchs, M.Kvaratskhelia. Structural and Mechanistic Bases of Viral Resistance to Hiv-1 Capsid Inhibitor Lenacapavir. Mbio V. 13 80422 2022.
ISSN: ESSN 2150-7511
PubMed: 36190128
DOI: 10.1128/MBIO.01804-22
Page generated: Fri Aug 2 12:06:26 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy