Fluorine in PDB 7rkw: Naegleria Fowleri CYP51(NFCYP51) Complex with (S)-1-(4-Fluorophenyl)- 2-(1H-Imidazol-1-Yl)Ethyl 3,5-Dichlorobenzoate

The structure of Naegleria Fowleri CYP51(NFCYP51) Complex with (S)-1-(4-Fluorophenyl)- 2-(1H-Imidazol-1-Yl)Ethyl 3,5-Dichlorobenzoate, PDB code: 7rkw was solved by V.Sharma, L.M.Podust, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	70.94 / 1.81
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	121.29, 55.28, 72.06, 90, 100.14, 90
R / Rfree (%)	18.9 / 24

The structure of Naegleria Fowleri CYP51(NFCYP51) Complex with (S)-1-(4-Fluorophenyl)- 2-(1H-Imidazol-1-Yl)Ethyl 3,5-Dichlorobenzoate also contains other interesting chemical elements:

Chlorine	(Cl)	2 atoms
Iron	(Fe)	1 atom

The binding sites of Fluorine atom in the Naegleria Fowleri CYP51(NFCYP51) Complex with (S)-1-(4-Fluorophenyl)- 2-(1H-Imidazol-1-Yl)Ethyl 3,5-Dichlorobenzoate (pdb code 7rkw). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Naegleria Fowleri CYP51(NFCYP51) Complex with (S)-1-(4-Fluorophenyl)- 2-(1H-Imidazol-1-Yl)Ethyl 3,5-Dichlorobenzoate, PDB code: 7rkw:

Fluorine binding site 1 out of 1 in the Naegleria Fowleri CYP51(NFCYP51) Complex with (S)-1-(4-Fluorophenyl)- 2-(1H-Imidazol-1-Yl)Ethyl 3,5-Dichlorobenzoate


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Naegleria Fowleri CYP51(NFCYP51) Complex with (S)-1-(4-Fluorophenyl)- 2-(1H-Imidazol-1-Yl)Ethyl 3,5-Dichlorobenzoate within 5.0Å range: probe atom residue distance (Å) B Occ A:F502 b:64.2 occ:1.00 F1 A:5TV502 0.0 64.2 1.0 CG A:5TV502 1.3 59.4 1.0 CD2 A:5TV502 2.2 60.2 1.0 CD1 A:5TV502 2.4 55.0 1.0 CZ A:PHE84 3.3 47.2 1.0 CG A:MET85 3.3 47.8 1.0 CE2 A:5TV502 3.5 44.4 1.0 CD1 A:TYR82 3.5 58.2 1.0 CE1 A:PHE84 3.6 48.6 1.0 CE1 A:5TV502 3.6 53.9 1.0 C2 A:GOL503 3.8 74.0 1.0 SD A:MET85 3.9 49.0 1.0 C3 A:GOL503 4.0 73.9 1.0 CG A:TYR82 4.0 45.6 1.0 C4 A:5TV502 4.1 48.4 1.0 CB A:TYR82 4.1 40.5 1.0 CE1 A:TYR82 4.1 64.4 1.0 CE2 A:PHE84 4.2 48.5 1.0 O1 A:GOL503 4.5 87.0 1.0 CA A:TYR82 4.6 43.8 1.0 CD1 A:PHE84 4.7 49.3 1.0 O2 A:GOL503 4.7 82.6 1.0 CE A:MET85 4.7 51.6 1.0 C1 A:GOL503 4.7 86.6 1.0 O A:TYR82 4.7 44.9 1.0 CB A:MET85 4.7 46.8 1.0 CD2 A:TYR82 4.9 60.2 1.0 CD2 A:LEU442 5.0 69.6 1.0 CE2 A:TYR95 5.0 52.5 1.0 CZ A:TYR82 5.0 64.7 1.0

V.Sharma, L.M.Podust. Structure-Aided Approaches to Develop Naegleria Fowleri Specific Brain Permeable CYP51 Inhibitors. To Be Published.