Fluorine in PDB 7u31: Crystal Structure of Human GSK3B in Complex with G5

Enzymatic activity of Crystal Structure of Human GSK3B in Complex with G5

All present enzymatic activity of Crystal Structure of Human GSK3B in Complex with G5:
2.7.11.1; 2.7.11.26;

Protein crystallography data

The structure of Crystal Structure of Human GSK3B in Complex with G5, PDB code: 7u31 was solved by S.K.Tripathi, B.Balboni, B.Giabbai, P.Storici, S.Girotto, A.Cavalli, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.83 / 2.38
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 82.65, 85.36, 178.36, 90, 90, 90
R / Rfree (%) 24.2 / 27.6

Other elements in 7u31:

The structure of Crystal Structure of Human GSK3B in Complex with G5 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Human GSK3B in Complex with G5 (pdb code 7u31). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Crystal Structure of Human GSK3B in Complex with G5, PDB code: 7u31:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 7u31

Go back to Fluorine Binding Sites List in 7u31
Fluorine binding site 1 out of 2 in the Crystal Structure of Human GSK3B in Complex with G5


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Human GSK3B in Complex with G5 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F402

b:102.4
occ:1.00
F A:L7I402 0.0 102.4 1.0
C3 A:L7I402 1.4 97.4 1.0
C2 A:L7I402 2.4 93.2 1.0
C4 A:L7I402 2.4 95.6 1.0
NH1 A:ARG141 2.6 86.3 1.0
C1 A:L7I402 3.6 90.4 1.0
C5 A:L7I402 3.7 88.5 1.0
CD A:ARG141 3.7 74.8 1.0
CZ A:ARG141 3.8 84.5 1.0
NE A:ARG141 4.1 79.1 1.0
C A:L7I402 4.2 84.2 1.0
O A:PRO136 4.4 74.4 1.0
NH2 A:ARG141 4.9 87.5 1.0
CG A:ARG141 5.0 65.5 1.0

Fluorine binding site 2 out of 2 in 7u31

Go back to Fluorine Binding Sites List in 7u31
Fluorine binding site 2 out of 2 in the Crystal Structure of Human GSK3B in Complex with G5


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Crystal Structure of Human GSK3B in Complex with G5 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F402

b:98.8
occ:1.00
F B:L7I402 0.0 98.8 1.0
C3 B:L7I402 1.4 106.7 1.0
C4 B:L7I402 2.4 106.8 1.0
C2 B:L7I402 2.4 105.0 1.0
NH1 B:ARG141 3.0 100.0 1.0
C5 B:L7I402 3.7 100.0 1.0
CD B:ARG141 3.7 79.9 1.0
C1 B:L7I402 3.7 99.5 1.0
CZ B:ARG141 3.8 96.6 1.0
NE B:ARG141 4.1 88.0 1.0
C B:L7I402 4.2 96.7 1.0
O B:PRO136 4.6 63.0 1.0
CG B:ARG141 4.8 70.6 1.0
NH2 B:ARG141 4.8 100.8 1.0
CG2 B:THR138 5.0 43.2 1.0

Reference:

B.Balboni, S.K.Tripathi, M.Veronesi, D.Russo, I.Penna, B.Giabbai, T.Bandiera, P.Storici, S.Girotto, A.Cavalli. Identification of Novel Gsk-3 Beta Hits Using Competitive Biophysical Assays. Int J Mol Sci V. 23 2022.
ISSN: ESSN 1422-0067
PubMed: 35409221
DOI: 10.3390/IJMS23073856
Page generated: Fri Aug 2 13:53:42 2024

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