Fluorine in PDB 7u33: Crystal Structure of Human GSK3B in Complex with ARN9133

Enzymatic activity of Crystal Structure of Human GSK3B in Complex with ARN9133

All present enzymatic activity of Crystal Structure of Human GSK3B in Complex with ARN9133:
2.7.11.1; 2.7.11.26;

Protein crystallography data

The structure of Crystal Structure of Human GSK3B in Complex with ARN9133, PDB code: 7u33 was solved by S.K.Tripathi, B.Balboni, B.Giabbai, P.Storici, S.Girotto, A.Cavalli, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 77.36 / 2.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 82.64, 85.698, 178.261, 90, 90, 90
R / Rfree (%) 23.1 / 26.4

Other elements in 7u33:

The structure of Crystal Structure of Human GSK3B in Complex with ARN9133 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Human GSK3B in Complex with ARN9133 (pdb code 7u33). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Crystal Structure of Human GSK3B in Complex with ARN9133, PDB code: 7u33:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 7u33

Go back to Fluorine Binding Sites List in 7u33
Fluorine binding site 1 out of 2 in the Crystal Structure of Human GSK3B in Complex with ARN9133


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Human GSK3B in Complex with ARN9133 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F402

b:95.0
occ:1.00
F A:L7R402 0.0 95.0 1.0
C2 A:L7R402 1.3 91.8 1.0
C3 A:L7R402 2.4 91.2 1.0
C1 A:L7R402 2.4 91.4 1.0
NE A:ARG141 2.7 76.1 1.0
CZ A:ARG141 3.0 77.4 1.0
CD A:ARG141 3.3 75.1 1.0
NH2 A:ARG141 3.3 79.1 1.0
C4 A:L7R402 3.6 91.7 1.0
C A:L7R402 3.6 92.1 1.0
NH1 A:ARG141 3.7 76.4 1.0
C5 A:L7R402 4.1 92.8 1.0
O A:PRO136 4.1 76.2 1.0
CG A:ARG141 4.7 72.9 1.0
CG2 A:THR138 5.0 60.8 1.0

Fluorine binding site 2 out of 2 in 7u33

Go back to Fluorine Binding Sites List in 7u33
Fluorine binding site 2 out of 2 in the Crystal Structure of Human GSK3B in Complex with ARN9133


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Crystal Structure of Human GSK3B in Complex with ARN9133 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F402

b:109.2
occ:1.00
F B:L7R402 0.0 109.2 1.0
C2 B:L7R402 1.4 108.5 1.0
C3 B:L7R402 2.4 107.9 1.0
C1 B:L7R402 2.4 108.2 1.0
CD B:ARG141 3.6 75.8 1.0
C4 B:L7R402 3.6 105.7 1.0
C B:L7R402 3.7 107.1 1.0
NE B:ARG141 3.7 79.0 1.0
CZ B:ARG141 3.9 82.2 1.0
NH1 B:ARG141 4.0 82.5 1.0
C5 B:L7R402 4.1 106.0 1.0
NH2 B:ARG141 4.6 84.4 1.0
O B:PRO136 4.8 70.4 1.0
CG B:ARG141 4.8 72.0 1.0
CG2 B:THR138 5.0 60.6 1.0

Reference:

B.Balboni, S.K.Tripathi, M.Veronesi, D.Russo, I.Penna, B.Giabbai, T.Bandiera, P.Storici, S.Girotto, A.Cavalli. Identification of Novel Gsk-3 Beta Hits Using Competitive Biophysical Assays. Int J Mol Sci V. 23 2022.
ISSN: ESSN 1422-0067
PubMed: 35409221
DOI: 10.3390/IJMS23073856
Page generated: Fri Aug 2 13:54:19 2024

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