Fluorine in PDB 7vih: Cryo-Em Structure of Gi Coupled Sphingosine 1-Phosphate Receptor Bound with Cbp-307

The binding sites of Fluorine atom in the Cryo-Em Structure of Gi Coupled Sphingosine 1-Phosphate Receptor Bound with Cbp-307 (pdb code 7vih). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Cryo-Em Structure of Gi Coupled Sphingosine 1-Phosphate Receptor Bound with Cbp-307, PDB code: 7vih:

Fluorine binding site 1 out of 1 in the Cryo-Em Structure of Gi Coupled Sphingosine 1-Phosphate Receptor Bound with Cbp-307


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Cryo-Em Structure of Gi Coupled Sphingosine 1-Phosphate Receptor Bound with Cbp-307 within 5.0Å range: probe atom residue distance (Å) B Occ F:F401 b:104.1 occ:1.00 F25 F:7I4401 0.0 104.1 1.0 C24 F:7I4401 1.3 104.1 1.0 C15 F:7I4401 2.2 104.1 1.0 C26 F:7I4401 2.4 104.1 1.0 C16 F:7I4401 2.7 104.1 1.0 N17 F:7I4401 2.8 104.1 1.0 ND2 F:ASN101 2.8 101.9 1.0 OD1 F:ASN101 3.0 101.9 1.0 OG F:SER105 3.1 98.7 1.0 CG F:ASN101 3.3 101.9 1.0 C14 F:7I4401 3.5 104.1 1.0 NH1 F:ARG120 3.5 95.3 1.0 C18 F:7I4401 3.6 104.1 1.0 C12 F:7I4401 3.6 104.1 1.0 C13 F:7I4401 4.0 104.1 1.0 C23 F:7I4401 4.0 104.1 1.0 CB F:SER105 4.1 98.7 1.0 O F:ASN101 4.4 101.9 1.0 OE2 F:GLU121 4.5 96.7 1.0 C19 F:7I4401 4.6 104.1 1.0 CB F:ASN101 4.7 101.9 1.0 CZ F:ARG120 4.8 95.3 1.0 C F:ASN101 4.8 101.9 1.0

L.Yu, L.He, B.Gan, R.Ti, Q.Xiao, H.Hu, L.Zhu, S.Wang, R.Ren. Structural Insights Into Sphingosine-1-Phosphate Receptor Activation. Proc.Natl.Acad.Sci.Usa V. 119 16119 2022.
ISSN: ESSN 1091-6490
PubMed: 35412894
DOI: 10.1073/PNAS.2117716119