Fluorine in PDB 7wjk: Complex Structure of Athppd-Zwj

Enzymatic activity of Complex Structure of Athppd-Zwj

All present enzymatic activity of Complex Structure of Athppd-Zwj:
1.13.11.27;

Protein crystallography data

The structure of Complex Structure of Athppd-Zwj, PDB code: 7wjk was solved by G.-F.Yang, H.-Y.Lin, J.Dong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.74 / 1.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 77.145, 84.08, 62.55, 90, 100.88, 90
R / Rfree (%) 20.8 / 24.2

Other elements in 7wjk:

The structure of Complex Structure of Athppd-Zwj also contains other interesting chemical elements:

Cobalt (Co) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Complex Structure of Athppd-Zwj (pdb code 7wjk). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Complex Structure of Athppd-Zwj, PDB code: 7wjk:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 7wjk

Go back to Fluorine Binding Sites List in 7wjk
Fluorine binding site 1 out of 2 in the Complex Structure of Athppd-Zwj


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Complex Structure of Athppd-Zwj within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F502

b:112.0
occ:1.00
F52 A:0I7502 0.0 112.0 1.0
B51 A:0I7502 1.7 109.1 1.0
N43 A:0I7502 2.5 108.7 1.0
N50 A:0I7502 2.5 108.5 1.0
F53 A:0I7502 2.7 105.7 1.0
C44 A:0I7502 3.1 107.8 1.0
C49 A:0I7502 3.1 108.4 1.0
C54 A:0I7502 3.2 105.0 1.0
C56 A:0I7502 3.2 107.2 1.0
C41 A:0I7502 3.6 105.2 1.0
C42 A:0I7502 3.6 106.4 1.0
C40 A:0I7502 4.2 103.4 1.0
C45 A:0I7502 4.3 104.8 1.0
C48 A:0I7502 4.3 107.3 1.0
C46 A:0I7502 4.6 102.0 1.0
C47 A:0I7502 4.6 106.8 1.0

Fluorine binding site 2 out of 2 in 7wjk

Go back to Fluorine Binding Sites List in 7wjk
Fluorine binding site 2 out of 2 in the Complex Structure of Athppd-Zwj


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Complex Structure of Athppd-Zwj within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F502

b:105.7
occ:1.00
F53 A:0I7502 0.0 105.7 1.0
B51 A:0I7502 1.7 109.1 1.0
N50 A:0I7502 2.6 108.5 1.0
N43 A:0I7502 2.6 108.7 1.0
F52 A:0I7502 2.7 112.0 1.0
C49 A:0I7502 3.3 108.4 1.0
C44 A:0I7502 3.3 107.8 1.0
C36 A:0I7502 3.5 98.2 1.0
C42 A:0I7502 3.5 106.4 1.0
C41 A:0I7502 3.6 105.2 1.0
C56 A:0I7502 3.6 107.2 1.0
C54 A:0I7502 3.6 105.0 1.0
C40 A:0I7502 3.9 103.4 1.0
C37 A:0I7502 4.3 100.0 1.0
C48 A:0I7502 4.4 107.3 1.0
C45 A:0I7502 4.5 104.8 1.0
C47 A:0I7502 4.6 106.8 1.0
C46 A:0I7502 4.6 102.0 1.0
C35 A:0I7502 4.6 86.6 1.0

Reference:

G.-F.Yang, H.-Y.Lin, J.Dong. Complex Structure of Athppd-PYQ1 To Be Published.
Page generated: Fri Aug 2 14:49:21 2024

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