Fluorine in PDB 7xr1: Crystal Structure of T2R-Ttl-3A Complex
Protein crystallography data
The structure of Crystal Structure of T2R-Ttl-3A Complex, PDB code: 7xr1
was solved by
T.Lun,
C.Y.Wu,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
56.35 /
2.81
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
105.096,
157.528,
181.017,
90,
90,
90
|
R / Rfree (%)
|
20.3 /
24.6
|
Other elements in 7xr1:
The structure of Crystal Structure of T2R-Ttl-3A Complex also contains other interesting chemical elements:
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Crystal Structure of T2R-Ttl-3A Complex
(pdb code 7xr1). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the
Crystal Structure of T2R-Ttl-3A Complex, PDB code: 7xr1:
Jump to Fluorine binding site number:
1;
2;
Fluorine binding site 1 out
of 2 in 7xr1
Go back to
Fluorine Binding Sites List in 7xr1
Fluorine binding site 1 out
of 2 in the Crystal Structure of T2R-Ttl-3A Complex
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of T2R-Ttl-3A Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F505
b:43.6
occ:1.00
|
F22
|
B:GY2505
|
0.0
|
43.6
|
1.0
|
C01
|
B:GY2505
|
1.4
|
39.0
|
1.0
|
C06
|
B:GY2505
|
2.4
|
35.0
|
1.0
|
C02
|
B:GY2505
|
2.4
|
37.8
|
1.0
|
O
|
B:LYS350
|
2.9
|
33.0
|
1.0
|
C
|
B:LYS350
|
2.9
|
40.3
|
1.0
|
N
|
B:THR351
|
3.0
|
38.3
|
1.0
|
C
|
B:THR351
|
3.3
|
33.3
|
1.0
|
CA
|
B:THR351
|
3.3
|
37.1
|
1.0
|
CB
|
B:LYS350
|
3.4
|
33.5
|
1.0
|
N
|
B:ALA352
|
3.6
|
32.5
|
1.0
|
O
|
B:THR351
|
3.6
|
38.8
|
1.0
|
C03
|
B:GY2505
|
3.7
|
41.8
|
1.0
|
C05
|
B:GY2505
|
3.7
|
35.1
|
1.0
|
O
|
B:ALA315
|
3.7
|
43.2
|
1.0
|
CA
|
B:LYS350
|
3.7
|
35.9
|
1.0
|
N
|
B:ALA315
|
4.0
|
38.3
|
1.0
|
CB
|
B:ALA352
|
4.0
|
31.4
|
1.0
|
CB
|
B:ALA314
|
4.1
|
33.4
|
1.0
|
C04
|
B:GY2505
|
4.2
|
35.2
|
1.0
|
CA
|
B:ALA314
|
4.3
|
30.2
|
1.0
|
CA
|
B:ALA352
|
4.4
|
30.5
|
1.0
|
CG
|
B:LYS350
|
4.4
|
43.9
|
1.0
|
C
|
B:ALA314
|
4.6
|
34.7
|
1.0
|
CD2
|
B:LEU246
|
4.6
|
48.7
|
1.0
|
C
|
B:ALA315
|
4.7
|
36.7
|
1.0
|
C18
|
B:GY2505
|
4.7
|
33.4
|
1.0
|
N
|
B:LYS350
|
4.7
|
29.8
|
1.0
|
C13
|
B:GY2505
|
4.8
|
28.4
|
1.0
|
CB
|
B:THR351
|
4.8
|
33.4
|
1.0
|
C10
|
B:GY2505
|
4.9
|
32.2
|
1.0
|
C17
|
B:GY2505
|
4.9
|
35.8
|
1.0
|
CA
|
B:ALA315
|
5.0
|
28.0
|
1.0
|
|
Fluorine binding site 2 out
of 2 in 7xr1
Go back to
Fluorine Binding Sites List in 7xr1
Fluorine binding site 2 out
of 2 in the Crystal Structure of T2R-Ttl-3A Complex
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of T2R-Ttl-3A Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:F502
b:41.3
occ:1.00
|
F22
|
D:GY2502
|
0.0
|
41.3
|
1.0
|
C01
|
D:GY2502
|
1.4
|
46.7
|
1.0
|
C06
|
D:GY2502
|
2.4
|
43.6
|
1.0
|
C02
|
D:GY2502
|
2.4
|
43.8
|
1.0
|
N
|
D:THR351
|
3.0
|
43.2
|
1.0
|
C
|
D:LYS350
|
3.0
|
38.3
|
1.0
|
CB
|
D:LYS350
|
3.1
|
39.0
|
1.0
|
O
|
D:LYS350
|
3.2
|
38.2
|
1.0
|
C
|
D:THR351
|
3.2
|
39.8
|
1.0
|
N
|
D:ALA352
|
3.3
|
38.1
|
1.0
|
CA
|
D:THR351
|
3.4
|
35.3
|
1.0
|
CA
|
D:LYS350
|
3.7
|
37.6
|
1.0
|
C05
|
D:GY2502
|
3.7
|
50.6
|
1.0
|
C03
|
D:GY2502
|
3.7
|
47.7
|
1.0
|
O
|
D:THR351
|
3.8
|
50.2
|
1.0
|
O
|
D:ALA315
|
3.9
|
41.4
|
1.0
|
C04
|
D:GY2502
|
4.2
|
50.2
|
1.0
|
CB
|
D:ALA352
|
4.2
|
37.2
|
1.0
|
CB
|
D:ALA314
|
4.3
|
36.1
|
1.0
|
CA
|
D:ALA352
|
4.3
|
40.3
|
1.0
|
CG
|
D:LYS350
|
4.3
|
38.6
|
1.0
|
N
|
D:ALA315
|
4.4
|
43.2
|
1.0
|
CA
|
D:ALA314
|
4.5
|
31.6
|
1.0
|
N
|
D:LYS350
|
4.7
|
38.3
|
1.0
|
C14
|
D:GY2502
|
4.7
|
41.9
|
1.0
|
C13
|
D:GY2502
|
4.8
|
39.1
|
1.0
|
C10
|
D:GY2502
|
4.8
|
52.0
|
1.0
|
CB
|
D:THR351
|
4.9
|
33.8
|
1.0
|
C
|
D:ALA314
|
4.9
|
39.0
|
1.0
|
C
|
D:ALA315
|
5.0
|
43.6
|
1.0
|
|
Reference:
T.Lun,
W.Chengyong.
Crystal Structure of T2R-Ttl-3A Complex To Be Published.
Page generated: Fri Aug 2 15:31:19 2024
|