Fluorine in PDB 7xww: Crystal Structure of Ntr in Complex with Bn-Xb

Enzymatic activity of Crystal Structure of Ntr in Complex with Bn-Xb

All present enzymatic activity of Crystal Structure of Ntr in Complex with Bn-Xb:
1.5.1.34;

Protein crystallography data

The structure of Crystal Structure of Ntr in Complex with Bn-Xb, PDB code: 7xww was solved by X.Chen, J.Chen, J.L.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.26 / 2.80
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 43.87, 61.669, 88.332, 96.64, 100.83, 110.72
R / Rfree (%) 28.6 / 37.9

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Ntr in Complex with Bn-Xb (pdb code 7xww). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Crystal Structure of Ntr in Complex with Bn-Xb, PDB code: 7xww:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 7xww

Go back to Fluorine Binding Sites List in 7xww
Fluorine binding site 1 out of 2 in the Crystal Structure of Ntr in Complex with Bn-Xb


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Ntr in Complex with Bn-Xb within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F301

b:128.8
occ:1.00
F01 A:I5O301 0.0 128.8 1.0
B15 A:I5O301 1.7 130.6 1.0
N14 A:I5O301 2.5 130.2 1.0
N16 A:I5O301 2.5 126.2 1.0
F02 A:I5O301 2.8 132.6 1.0
C05 A:I5O301 3.0 118.6 1.0
C03 A:I5O301 3.0 122.3 1.0
C09 A:I5O301 3.0 125.7 1.0
C10 A:I5O301 3.0 119.9 1.0
CD2 B:PHE199 3.4 109.7 1.0
C13 A:I5O301 3.7 125.2 1.0
C17 A:I5O301 3.7 119.3 1.0
CE2 B:PHE199 3.9 111.7 1.0
C18 A:I5O301 4.2 119.3 1.0
C08 A:I5O301 4.3 122.4 1.0
C11 A:I5O301 4.3 113.1 1.0
CG B:PHE199 4.4 109.0 1.0
C07 A:I5O301 4.6 123.2 1.0
C12 A:I5O301 4.6 109.5 1.0
CB B:PHE199 4.6 97.5 1.0

Fluorine binding site 2 out of 2 in 7xww

Go back to Fluorine Binding Sites List in 7xww
Fluorine binding site 2 out of 2 in the Crystal Structure of Ntr in Complex with Bn-Xb


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Crystal Structure of Ntr in Complex with Bn-Xb within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F301

b:132.6
occ:1.00
F02 A:I5O301 0.0 132.6 1.0
B15 A:I5O301 1.7 130.6 1.0
N14 A:I5O301 2.6 130.2 1.0
N16 A:I5O301 2.6 126.2 1.0
F01 A:I5O301 2.8 128.8 1.0
C10 A:I5O301 3.4 119.9 1.0
C13 A:I5O301 3.4 125.2 1.0
C09 A:I5O301 3.4 125.7 1.0
C17 A:I5O301 3.4 119.3 1.0
C18 A:I5O301 3.6 119.3 1.0
C05 A:I5O301 3.8 118.6 1.0
C03 A:I5O301 3.8 122.3 1.0
C29 A:I5O301 4.3 111.4 1.0
C11 A:I5O301 4.5 113.1 1.0
C08 A:I5O301 4.5 122.4 1.0
C07 A:I5O301 4.5 123.2 1.0
C12 A:I5O301 4.5 109.5 1.0
C28 A:I5O301 4.7 103.4 1.0

Reference:

X.Chen, J.Chen, J.L.Li. Crystal Structure of Ntr in Complex with Bn-Xb To Be Published.
Page generated: Fri Aug 2 15:40:11 2024

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