Fluorine in PDB 7yv1: Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab
Protein crystallography data
The structure of Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab, PDB code: 7yv1
was solved by
M.Irie,
T.A.Fukami,
A.Matsuo,
K.Saka,
M.Nishimura,
H.Saito,
T.Torizawa,
M.Tanada,
A.Ohta,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 58.41 / 1.45 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 65.617, 90.373, 116.81, 90, 90, 90 |
| R / Rfree (%) | 23.8 / 27.7 |
Other elements in 7yv1:
The structure of Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab also contains other interesting chemical elements:
| Magnesium | (Mg) | 1 atom |
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab
(pdb code 7yv1). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 5 binding sites of Fluorine where determined in the Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab, PDB code: 7yv1:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5;
In total 5 binding sites of Fluorine where determined in the Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab, PDB code: 7yv1:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5;
Fluorine binding site 1 out of 5 in 7yv1
Go back to
Fluorine Binding Sites List in 7yv1
Fluorine binding site 1 out
of 5 in the Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab within 5.0Å range:
|
Fluorine binding site 2 out of 5 in 7yv1
Go back to
Fluorine Binding Sites List in 7yv1
Fluorine binding site 2 out
of 5 in the Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab within 5.0Å range:
|
Fluorine binding site 3 out of 5 in 7yv1
Go back to
Fluorine Binding Sites List in 7yv1
Fluorine binding site 3 out
of 5 in the Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab within 5.0Å range:
|
Fluorine binding site 4 out of 5 in 7yv1
Go back to
Fluorine Binding Sites List in 7yv1
Fluorine binding site 4 out
of 5 in the Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab within 5.0Å range:
|
Fluorine binding site 5 out of 5 in 7yv1
Go back to
Fluorine Binding Sites List in 7yv1
Fluorine binding site 5 out
of 5 in the Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab within 5.0Å range:
|
Reference:
M.Tanada,
A.Ohta.
Human K-Ras G12D (Gdp-Bound) in Complex with Cyclic Peptide Inhibitor LUNA18 and KA30L Fab To Be Published.
Page generated: Fri Aug 2 15:53:30 2024
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