Fluorine in PDB 7zkf: Crystal Structure of Human Brachyury G177D Variant in Complex with Cf- 5-86

Protein crystallography data

The structure of Crystal Structure of Human Brachyury G177D Variant in Complex with Cf- 5-86, PDB code: 7zkf was solved by J.A.Newman, A.Gavard, H.Aitkenhead, N.Imprachim, L.Sherestha, N.A.Burgess-Brown, F.Von Delft, C.Bountra, O.Gileadi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.98 / 1.49
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 99.96, 99.96, 99.03, 90, 90, 120
R / Rfree (%) 18.1 / 21.9

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Human Brachyury G177D Variant in Complex with Cf- 5-86 (pdb code 7zkf). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of Human Brachyury G177D Variant in Complex with Cf- 5-86, PDB code: 7zkf:

Fluorine binding site 1 out of 1 in 7zkf

Go back to Fluorine Binding Sites List in 7zkf
Fluorine binding site 1 out of 1 in the Crystal Structure of Human Brachyury G177D Variant in Complex with Cf- 5-86


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Human Brachyury G177D Variant in Complex with Cf- 5-86 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F301

b:49.4
occ:1.00
F1 A:UNL301 0.0 49.4 1.0
C15 A:UNL301 1.4 40.6 1.0
C14 A:UNL301 2.3 33.9 1.0
C10 A:UNL301 2.4 29.6 1.0
C9 A:UNL301 2.8 30.3 1.0
CD1 A:ILE182 3.1 24.2 1.0
C6 A:UNL301 3.3 33.4 1.0
CG2 A:VAL173 3.5 30.0 1.0
C13 A:UNL301 3.6 37.0 1.0
C11 A:UNL301 3.6 42.5 1.0
CD2 A:LEU91 3.7 31.9 1.0
CB A:HIS171 3.8 22.7 1.0
C7 A:UNL301 3.8 37.3 1.0
CD1 A:LEU91 3.9 38.1 1.0
C5 A:UNL301 4.0 35.7 1.0
CG A:HIS171 4.0 23.0 1.0
C12 A:UNL301 4.1 49.7 1.0
CG A:LEU91 4.1 28.3 1.0
O1 A:UNL301 4.2 44.9 1.0
CB A:LEU91 4.2 26.5 1.0
CG1 A:ILE182 4.3 18.1 1.0
ND1 A:HIS171 4.5 23.5 1.0
CD2 A:HIS171 4.5 24.5 1.0
C8 A:UNL301 4.8 28.3 1.0
C4 A:UNL301 4.9 32.6 1.0
CB A:VAL173 5.0 31.2 1.0

Reference:

J.A.Newman, A.Gavard, H.Aitkenhead, N.Imprachim, L.Sherestha, N.A.Burgess-Brown, F.Von Delft, C.Bountra, O.Gileadi. Crystal Structure of Human Brachyury G177D Variant in Complex with Cf-5-86 To Be Published.
Page generated: Wed Apr 5 02:00:55 2023

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