Fluorine in PDB 7zv0: Crystal Structure of Human Sting in Complex with 3',3'-C-(2'F,2'Damp- 2'F,2'DAmp)

Protein crystallography data

The structure of Crystal Structure of Human Sting in Complex with 3',3'-C-(2'F,2'Damp- 2'F,2'DAmp), PDB code: 7zv0 was solved by M.Klima, M.Smola, E.Boura, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.08 / 2.31
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 110.916, 110.916, 35.818, 90, 90, 90
R / Rfree (%) 20.6 / 23

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Human Sting in Complex with 3',3'-C-(2'F,2'Damp- 2'F,2'DAmp) (pdb code 7zv0). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Crystal Structure of Human Sting in Complex with 3',3'-C-(2'F,2'Damp- 2'F,2'DAmp), PDB code: 7zv0:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 7zv0

Go back to Fluorine Binding Sites List in 7zv0
Fluorine binding site 1 out of 2 in the Crystal Structure of Human Sting in Complex with 3',3'-C-(2'F,2'Damp- 2'F,2'DAmp)


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Human Sting in Complex with 3',3'-C-(2'F,2'Damp- 2'F,2'DAmp) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F401

b:19.8
occ:0.50
 F22 A:K1C401 0.0 19.8 0.5
C22 A:K1C401 1.4 20.1 0.5
C23 A:K1C401 2.4 19.9 0.5
C21 A:K1C401 2.4 19.9 0.5
O23 A:K1C401 2.7 19.8 0.5
C24 A:K1C401 2.8 20.8 0.5
O24 A:K1C401 3.0 19.9 0.5
CD A:PRO264 3.2 18.5 1.0
CB A:THR263 3.3 22.0 1.0
O A:HOH511 3.3 18.3 1.0
CG A:PRO264 3.5 18.4 1.0
CD1 A:TYR163 3.5 19.9 1.0
N9 A:K1C401 3.7 19.4 0.5
O35A A:K1C401 3.8 20.1 0.5
P35 A:K1C401 3.8 21.3 0.5
OG1 A:THR263 3.8 19.6 1.0
CE1 A:TYR163 3.8 16.7 1.0
N A:PRO264 3.9 19.6 1.0
CG2 A:THR263 4.1 17.0 1.0
CA A:THR263 4.2 20.1 1.0
N3 A:K1C401 4.2 19.8 0.5
C25 A:K1C401 4.3 20.0 0.5
C4 A:K1C401 4.3 19.6 0.5
N A:THR263 4.3 21.2 1.0
C A:THR263 4.3 19.4 1.0
O35B A:K1C401 4.5 19.1 0.5
CG A:TYR163 4.8 17.6 1.0
C8 A:K1C401 4.8 20.2 0.5
CB A:PRO264 4.8 16.8 1.0
CA A:PRO264 4.8 19.5 1.0
O A:HOH515 4.9 22.3 1.0

Fluorine binding site 2 out of 2 in 7zv0

Go back to Fluorine Binding Sites List in 7zv0
Fluorine binding site 2 out of 2 in the Crystal Structure of Human Sting in Complex with 3',3'-C-(2'F,2'Damp- 2'F,2'DAmp)


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Crystal Structure of Human Sting in Complex with 3',3'-C-(2'F,2'Damp- 2'F,2'DAmp) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F401

b:19.8
occ:0.50
 F32 A:K1C401 0.0 19.8 0.5
C32 A:K1C401 1.4 20.1 0.5
C33 A:K1C401 2.4 19.7 0.5
C31 A:K1C401 2.4 19.8 0.5
O33 A:K1C401 2.7 19.8 0.5
C34 A:K1C401 2.7 20.8 0.5
C36 A:K1C401 2.9 20.1 0.5
N19 A:K1C401 3.7 19.4 0.5
P25 A:K1C401 3.9 21.3 0.5
O25B A:K1C401 4.0 20.0 0.5
C35 A:K1C401 4.2 19.9 0.5
N13 A:K1C401 4.3 19.8 0.5
C14 A:K1C401 4.4 19.6 0.5
O25A A:K1C401 4.6 19.0 0.5
C18 A:K1C401 4.8 20.2 0.5

Reference:

M.Klima, M.Smola, E.Boura. Crystal Structure of Human Sting in Complex with 3',3'-C-(2'F,2'Damp-2'F,2'DAmp) To Be Published.
Page generated: Fri Aug 2 16:19:47 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy