Fluorine in PDB 8a2r: Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State.
Other elements in 8a2r:
The structure of Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State. also contains other interesting chemical elements:
Fluorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
15;
Binding sites:
The binding sites of Fluorine atom in the Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State.
(pdb code 8a2r). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 15 binding sites of Fluorine where determined in the
Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State., PDB code: 8a2r:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Fluorine binding site 1 out
of 15 in 8a2r
Go back to
Fluorine Binding Sites List in 8a2r
Fluorine binding site 1 out
of 15 in the Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State.
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F403
b:23.5
occ:1.00
|
F1
|
C:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
C:BEF403
|
1.5
|
23.5
|
1.0
|
|
F3
|
C:BEF403
|
2.5
|
23.5
|
1.0
|
|
O3B
|
C:ADP401
|
2.6
|
22.7
|
1.0
|
|
F2
|
C:BEF403
|
2.6
|
23.5
|
1.0
|
|
N
|
C:GLY158
|
2.7
|
23.6
|
1.0
|
|
N
|
C:VAL159
|
2.8
|
23.4
|
1.0
|
|
N
|
C:ASP157
|
2.9
|
23.2
|
1.0
|
|
CA
|
C:GLY156
|
3.3
|
21.9
|
1.0
|
|
C
|
C:GLY156
|
3.3
|
21.9
|
1.0
|
|
CA
|
C:GLY158
|
3.4
|
23.6
|
1.0
|
|
O
|
C:VAL159
|
3.4
|
23.4
|
1.0
|
|
C
|
C:GLY158
|
3.6
|
23.6
|
1.0
|
|
N
|
C:GLY156
|
3.6
|
21.9
|
1.0
|
|
O
|
C:HOH501
|
3.6
|
24.9
|
1.0
|
|
C
|
C:ASP157
|
3.7
|
23.2
|
1.0
|
|
CA
|
C:VAL159
|
3.7
|
23.4
|
1.0
|
|
CA
|
C:ASP157
|
3.8
|
23.2
|
1.0
|
|
PB
|
C:ADP401
|
3.9
|
22.7
|
1.0
|
|
CB
|
C:VAL159
|
4.0
|
23.4
|
1.0
|
|
C
|
C:VAL159
|
4.0
|
23.4
|
1.0
|
|
O
|
C:HOH589
|
4.0
|
29.8
|
1.0
|
|
OG
|
C:SER14
|
4.1
|
24.1
|
1.0
|
|
O3A
|
C:ADP401
|
4.3
|
22.7
|
1.0
|
|
O
|
C:GLY156
|
4.3
|
21.9
|
1.0
|
|
CG2
|
C:VAL159
|
4.3
|
23.4
|
1.0
|
|
MG
|
C:MG402
|
4.4
|
25.1
|
1.0
|
|
CB
|
C:SER14
|
4.4
|
24.1
|
1.0
|
|
CB
|
C:ASP157
|
4.6
|
23.2
|
1.0
|
|
O2B
|
C:ADP401
|
4.6
|
22.7
|
1.0
|
|
CB
|
C:ALA181
|
4.6
|
22.8
|
1.0
|
|
O
|
C:HOH515
|
4.7
|
22.7
|
1.0
|
|
N
|
C:SER14
|
4.7
|
24.1
|
1.0
|
|
O
|
C:GLY158
|
4.8
|
23.6
|
1.0
|
|
O
|
C:ASP157
|
4.8
|
23.2
|
1.0
|
|
C
|
C:SER155
|
4.9
|
22.4
|
1.0
|
|
Fluorine binding site 2 out
of 15 in 8a2r
Go back to
Fluorine Binding Sites List in 8a2r
Fluorine binding site 2 out
of 15 in the Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State.
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F403
b:23.5
occ:1.00
|
F2
|
C:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
C:BEF403
|
1.6
|
23.5
|
1.0
|
|
MG
|
C:MG402
|
1.9
|
25.1
|
1.0
|
|
O3B
|
C:ADP401
|
2.3
|
22.7
|
1.0
|
|
F3
|
C:BEF403
|
2.5
|
23.5
|
1.0
|
|
F1
|
C:BEF403
|
2.6
|
23.5
|
1.0
|
|
O
|
C:HOH543
|
2.8
|
25.6
|
1.0
|
|
O2B
|
C:ADP401
|
2.8
|
22.7
|
1.0
|
|
O
|
C:HOH515
|
3.0
|
22.7
|
1.0
|
|
PB
|
C:ADP401
|
3.1
|
22.7
|
1.0
|
|
O
|
C:HOH501
|
3.2
|
24.9
|
1.0
|
|
O
|
C:HOH589
|
3.3
|
29.8
|
1.0
|
|
O
|
C:HOH511
|
3.3
|
28.4
|
1.0
|
|
O
|
C:HOH523
|
3.8
|
25.8
|
1.0
|
|
O3A
|
C:ADP401
|
3.8
|
22.7
|
1.0
|
|
CA
|
C:GLY156
|
3.9
|
21.9
|
1.0
|
|
OE1
|
C:GLN137
|
4.1
|
30.8
|
1.0
|
|
OD1
|
C:ASP154
|
4.2
|
24.1
|
1.0
|
|
N
|
C:GLY156
|
4.3
|
21.9
|
1.0
|
|
N
|
C:ASP157
|
4.4
|
23.2
|
1.0
|
|
O1B
|
C:ADP401
|
4.4
|
22.7
|
1.0
|
|
CA
|
C:GLY13
|
4.5
|
25.1
|
1.0
|
|
N
|
C:SER14
|
4.6
|
24.1
|
1.0
|
|
C
|
C:GLY156
|
4.7
|
21.9
|
1.0
|
|
NE2
|
C:GLN137
|
4.7
|
30.8
|
1.0
|
|
CD
|
C:GLN137
|
4.7
|
30.8
|
1.0
|
|
O2A
|
C:ADP401
|
4.8
|
22.7
|
1.0
|
|
O
|
C:VAL159
|
4.8
|
23.4
|
1.0
|
|
PA
|
C:ADP401
|
4.9
|
22.7
|
1.0
|
|
Fluorine binding site 3 out
of 15 in 8a2r
Go back to
Fluorine Binding Sites List in 8a2r
Fluorine binding site 3 out
of 15 in the Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State.
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F403
b:23.5
occ:1.00
|
F3
|
C:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
C:BEF403
|
1.5
|
23.5
|
1.0
|
|
O3B
|
C:ADP401
|
2.3
|
22.7
|
1.0
|
|
F2
|
C:BEF403
|
2.5
|
23.5
|
1.0
|
|
F1
|
C:BEF403
|
2.5
|
23.5
|
1.0
|
|
OG
|
C:SER14
|
2.8
|
24.1
|
1.0
|
|
N
|
C:SER14
|
2.8
|
24.1
|
1.0
|
|
O
|
C:HOH589
|
3.0
|
29.8
|
1.0
|
|
CB
|
C:SER14
|
3.3
|
24.1
|
1.0
|
|
PB
|
C:ADP401
|
3.6
|
22.7
|
1.0
|
|
CA
|
C:SER14
|
3.6
|
24.1
|
1.0
|
|
C
|
C:GLY13
|
3.7
|
25.1
|
1.0
|
|
CA
|
C:GLY13
|
3.7
|
25.1
|
1.0
|
|
O
|
C:HOH543
|
3.9
|
25.6
|
1.0
|
|
O2B
|
C:ADP401
|
4.1
|
22.7
|
1.0
|
|
MG
|
C:MG402
|
4.1
|
25.1
|
1.0
|
|
N
|
C:GLY158
|
4.1
|
23.6
|
1.0
|
|
O1B
|
C:ADP401
|
4.3
|
22.7
|
1.0
|
|
N
|
C:VAL159
|
4.5
|
23.4
|
1.0
|
|
N
|
C:ASP157
|
4.5
|
23.2
|
1.0
|
|
CA
|
C:GLY74
|
4.5
|
27.4
|
1.0
|
|
CA
|
C:GLY158
|
4.5
|
23.6
|
1.0
|
|
CG2
|
C:VAL159
|
4.7
|
23.4
|
1.0
|
|
N
|
C:GLY74
|
4.7
|
27.4
|
1.0
|
|
O3A
|
C:ADP401
|
4.7
|
22.7
|
1.0
|
|
C
|
C:SER14
|
4.8
|
24.1
|
1.0
|
|
O
|
C:GLY13
|
4.8
|
25.1
|
1.0
|
|
N
|
C:GLY15
|
4.9
|
23.8
|
1.0
|
|
O
|
C:HOH501
|
4.9
|
24.9
|
1.0
|
|
CB
|
C:VAL159
|
5.0
|
23.4
|
1.0
|
|
C
|
C:GLY158
|
5.0
|
23.6
|
1.0
|
|
Fluorine binding site 4 out
of 15 in 8a2r
Go back to
Fluorine Binding Sites List in 8a2r
Fluorine binding site 4 out
of 15 in the Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State.
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F403
b:23.5
occ:1.00
|
F1
|
A:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
A:BEF403
|
1.5
|
23.5
|
1.0
|
|
F3
|
A:BEF403
|
2.5
|
23.5
|
1.0
|
|
O3B
|
A:ADP401
|
2.6
|
22.7
|
1.0
|
|
F2
|
A:BEF403
|
2.6
|
23.5
|
1.0
|
|
N
|
A:GLY158
|
2.7
|
23.6
|
1.0
|
|
N
|
A:VAL159
|
2.8
|
23.4
|
1.0
|
|
N
|
A:ASP157
|
2.9
|
23.2
|
1.0
|
|
CA
|
A:GLY156
|
3.3
|
21.9
|
1.0
|
|
C
|
A:GLY156
|
3.3
|
21.9
|
1.0
|
|
CA
|
A:GLY158
|
3.4
|
23.6
|
1.0
|
|
O
|
A:VAL159
|
3.4
|
23.4
|
1.0
|
|
C
|
A:GLY158
|
3.6
|
23.6
|
1.0
|
|
N
|
A:GLY156
|
3.6
|
21.9
|
1.0
|
|
O
|
A:HOH501
|
3.7
|
30.0
|
1.0
|
|
C
|
A:ASP157
|
3.7
|
23.2
|
1.0
|
|
CA
|
A:VAL159
|
3.7
|
23.4
|
1.0
|
|
CA
|
A:ASP157
|
3.8
|
23.2
|
1.0
|
|
PB
|
A:ADP401
|
3.9
|
22.7
|
1.0
|
|
CB
|
A:VAL159
|
4.0
|
23.4
|
1.0
|
|
C
|
A:VAL159
|
4.0
|
23.4
|
1.0
|
|
OG
|
A:SER14
|
4.1
|
24.1
|
1.0
|
|
O
|
A:HOH541
|
4.2
|
34.5
|
1.0
|
|
O3A
|
A:ADP401
|
4.3
|
22.7
|
1.0
|
|
O
|
A:GLY156
|
4.3
|
21.9
|
1.0
|
|
CG2
|
A:VAL159
|
4.3
|
23.4
|
1.0
|
|
MG
|
A:MG402
|
4.4
|
25.1
|
1.0
|
|
CB
|
A:SER14
|
4.4
|
24.1
|
1.0
|
|
CB
|
A:ASP157
|
4.6
|
23.2
|
1.0
|
|
O2B
|
A:ADP401
|
4.6
|
22.7
|
1.0
|
|
CB
|
A:ALA181
|
4.6
|
22.8
|
1.0
|
|
N
|
A:SER14
|
4.7
|
24.1
|
1.0
|
|
O
|
A:GLY158
|
4.8
|
23.6
|
1.0
|
|
O
|
A:ASP157
|
4.8
|
23.2
|
1.0
|
|
O
|
A:HOH508
|
4.9
|
28.9
|
1.0
|
|
C
|
A:SER155
|
4.9
|
22.4
|
1.0
|
|
Fluorine binding site 5 out
of 15 in 8a2r
Go back to
Fluorine Binding Sites List in 8a2r
Fluorine binding site 5 out
of 15 in the Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State.
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F403
b:23.5
occ:1.00
|
F2
|
A:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
A:BEF403
|
1.6
|
23.5
|
1.0
|
|
MG
|
A:MG402
|
1.9
|
25.1
|
1.0
|
|
O3B
|
A:ADP401
|
2.3
|
22.7
|
1.0
|
|
F3
|
A:BEF403
|
2.5
|
23.5
|
1.0
|
|
F1
|
A:BEF403
|
2.6
|
23.5
|
1.0
|
|
O2B
|
A:ADP401
|
2.8
|
22.7
|
1.0
|
|
O
|
A:HOH526
|
2.9
|
33.6
|
1.0
|
|
PB
|
A:ADP401
|
3.1
|
22.7
|
1.0
|
|
O
|
A:HOH508
|
3.2
|
28.9
|
1.0
|
|
O
|
A:HOH541
|
3.2
|
34.5
|
1.0
|
|
O
|
A:HOH538
|
3.2
|
33.4
|
1.0
|
|
O
|
A:HOH501
|
3.3
|
30.0
|
1.0
|
|
O
|
A:HOH527
|
3.8
|
32.9
|
1.0
|
|
O3A
|
A:ADP401
|
3.8
|
22.7
|
1.0
|
|
CA
|
A:GLY156
|
3.9
|
21.9
|
1.0
|
|
OE1
|
A:GLN137
|
4.1
|
30.8
|
1.0
|
|
OD1
|
A:ASP154
|
4.2
|
24.1
|
1.0
|
|
N
|
A:GLY156
|
4.3
|
21.9
|
1.0
|
|
N
|
A:ASP157
|
4.4
|
23.2
|
1.0
|
|
O1B
|
A:ADP401
|
4.4
|
22.7
|
1.0
|
|
CA
|
A:GLY13
|
4.5
|
25.1
|
1.0
|
|
N
|
A:SER14
|
4.6
|
24.1
|
1.0
|
|
C
|
A:GLY156
|
4.7
|
21.9
|
1.0
|
|
NE2
|
A:GLN137
|
4.7
|
30.8
|
1.0
|
|
CD
|
A:GLN137
|
4.7
|
30.8
|
1.0
|
|
O2A
|
A:ADP401
|
4.8
|
22.7
|
1.0
|
|
O
|
A:VAL159
|
4.8
|
23.4
|
1.0
|
|
PA
|
A:ADP401
|
4.9
|
22.7
|
1.0
|
|
Fluorine binding site 6 out
of 15 in 8a2r
Go back to
Fluorine Binding Sites List in 8a2r
Fluorine binding site 6 out
of 15 in the Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State.
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F403
b:23.5
occ:1.00
|
F3
|
A:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
A:BEF403
|
1.5
|
23.5
|
1.0
|
|
O3B
|
A:ADP401
|
2.3
|
22.7
|
1.0
|
|
F2
|
A:BEF403
|
2.5
|
23.5
|
1.0
|
|
F1
|
A:BEF403
|
2.5
|
23.5
|
1.0
|
|
OG
|
A:SER14
|
2.8
|
24.1
|
1.0
|
|
N
|
A:SER14
|
2.8
|
24.1
|
1.0
|
|
O
|
A:HOH541
|
2.8
|
34.5
|
1.0
|
|
CB
|
A:SER14
|
3.3
|
24.1
|
1.0
|
|
PB
|
A:ADP401
|
3.6
|
22.7
|
1.0
|
|
CA
|
A:SER14
|
3.6
|
24.1
|
1.0
|
|
C
|
A:GLY13
|
3.7
|
25.1
|
1.0
|
|
CA
|
A:GLY13
|
3.7
|
25.1
|
1.0
|
|
O
|
A:HOH526
|
4.0
|
33.6
|
1.0
|
|
O2B
|
A:ADP401
|
4.1
|
22.7
|
1.0
|
|
MG
|
A:MG402
|
4.1
|
25.1
|
1.0
|
|
N
|
A:GLY158
|
4.1
|
23.6
|
1.0
|
|
O1B
|
A:ADP401
|
4.3
|
22.7
|
1.0
|
|
N
|
A:VAL159
|
4.5
|
23.4
|
1.0
|
|
N
|
A:ASP157
|
4.5
|
23.2
|
1.0
|
|
CA
|
A:GLY74
|
4.5
|
27.4
|
1.0
|
|
CA
|
A:GLY158
|
4.5
|
23.6
|
1.0
|
|
CG2
|
A:VAL159
|
4.7
|
23.4
|
1.0
|
|
N
|
A:GLY74
|
4.7
|
27.4
|
1.0
|
|
O3A
|
A:ADP401
|
4.8
|
22.7
|
1.0
|
|
C
|
A:SER14
|
4.8
|
24.1
|
1.0
|
|
O
|
A:GLY13
|
4.8
|
25.1
|
1.0
|
|
N
|
A:GLY15
|
4.9
|
23.8
|
1.0
|
|
CB
|
A:VAL159
|
5.0
|
23.4
|
1.0
|
|
C
|
A:GLY158
|
5.0
|
23.6
|
1.0
|
|
Fluorine binding site 7 out
of 15 in 8a2r
Go back to
Fluorine Binding Sites List in 8a2r
Fluorine binding site 7 out
of 15 in the Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State.
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F403
b:23.5
occ:1.00
|
F1
|
B:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
B:BEF403
|
1.5
|
23.5
|
1.0
|
|
F3
|
B:BEF403
|
2.5
|
23.5
|
1.0
|
|
O3B
|
B:ADP401
|
2.6
|
22.7
|
1.0
|
|
F2
|
B:BEF403
|
2.6
|
23.5
|
1.0
|
|
N
|
B:GLY158
|
2.7
|
23.6
|
1.0
|
|
N
|
B:VAL159
|
2.8
|
23.4
|
1.0
|
|
N
|
B:ASP157
|
2.9
|
23.2
|
1.0
|
|
CA
|
B:GLY156
|
3.3
|
21.9
|
1.0
|
|
C
|
B:GLY156
|
3.3
|
21.9
|
1.0
|
|
CA
|
B:GLY158
|
3.4
|
23.6
|
1.0
|
|
O
|
B:VAL159
|
3.4
|
23.4
|
1.0
|
|
O
|
B:HOH501
|
3.5
|
25.4
|
1.0
|
|
C
|
B:GLY158
|
3.6
|
23.6
|
1.0
|
|
N
|
B:GLY156
|
3.6
|
21.9
|
1.0
|
|
C
|
B:ASP157
|
3.7
|
23.2
|
1.0
|
|
CA
|
B:VAL159
|
3.7
|
23.4
|
1.0
|
|
CA
|
B:ASP157
|
3.8
|
23.2
|
1.0
|
|
PB
|
B:ADP401
|
3.9
|
22.7
|
1.0
|
|
CB
|
B:VAL159
|
4.0
|
23.4
|
1.0
|
|
C
|
B:VAL159
|
4.0
|
23.4
|
1.0
|
|
OG
|
B:SER14
|
4.1
|
24.1
|
1.0
|
|
O
|
B:HOH593
|
4.2
|
31.3
|
1.0
|
|
O3A
|
B:ADP401
|
4.3
|
22.7
|
1.0
|
|
O
|
B:GLY156
|
4.3
|
21.9
|
1.0
|
|
CG2
|
B:VAL159
|
4.3
|
23.4
|
1.0
|
|
MG
|
B:MG402
|
4.4
|
25.1
|
1.0
|
|
CB
|
B:SER14
|
4.4
|
24.1
|
1.0
|
|
O
|
B:HOH514
|
4.5
|
23.9
|
1.0
|
|
CB
|
B:ASP157
|
4.6
|
23.2
|
1.0
|
|
O2B
|
B:ADP401
|
4.6
|
22.7
|
1.0
|
|
CB
|
B:ALA181
|
4.6
|
22.8
|
1.0
|
|
N
|
B:SER14
|
4.7
|
24.1
|
1.0
|
|
O
|
B:GLY158
|
4.8
|
23.6
|
1.0
|
|
O
|
B:ASP157
|
4.8
|
23.2
|
1.0
|
|
C
|
B:SER155
|
4.9
|
22.4
|
1.0
|
|
Fluorine binding site 8 out
of 15 in 8a2r
Go back to
Fluorine Binding Sites List in 8a2r
Fluorine binding site 8 out
of 15 in the Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State.
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F403
b:23.5
occ:1.00
|
F2
|
B:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
B:BEF403
|
1.6
|
23.5
|
1.0
|
|
MG
|
B:MG402
|
1.9
|
25.1
|
1.0
|
|
O3B
|
B:ADP401
|
2.3
|
22.7
|
1.0
|
|
F3
|
B:BEF403
|
2.5
|
23.5
|
1.0
|
|
F1
|
B:BEF403
|
2.6
|
23.5
|
1.0
|
|
O
|
B:HOH526
|
2.7
|
27.7
|
1.0
|
|
O2B
|
B:ADP401
|
2.8
|
22.7
|
1.0
|
|
O
|
B:HOH514
|
2.8
|
23.9
|
1.0
|
|
O
|
B:HOH501
|
3.0
|
25.4
|
1.0
|
|
PB
|
B:ADP401
|
3.1
|
22.7
|
1.0
|
|
O
|
B:HOH508
|
3.2
|
30.1
|
1.0
|
|
O
|
B:HOH593
|
3.5
|
31.3
|
1.0
|
|
O
|
B:HOH517
|
3.8
|
27.6
|
1.0
|
|
O3A
|
B:ADP401
|
3.8
|
22.7
|
1.0
|
|
CA
|
B:GLY156
|
3.9
|
21.9
|
1.0
|
|
OE1
|
B:GLN137
|
4.1
|
30.8
|
1.0
|
|
OD1
|
B:ASP154
|
4.2
|
24.1
|
1.0
|
|
N
|
B:GLY156
|
4.3
|
21.9
|
1.0
|
|
N
|
B:ASP157
|
4.4
|
23.2
|
1.0
|
|
O1B
|
B:ADP401
|
4.4
|
22.7
|
1.0
|
|
CA
|
B:GLY13
|
4.5
|
25.1
|
1.0
|
|
N
|
B:SER14
|
4.6
|
24.1
|
1.0
|
|
C
|
B:GLY156
|
4.7
|
21.9
|
1.0
|
|
NE2
|
B:GLN137
|
4.7
|
30.8
|
1.0
|
|
CD
|
B:GLN137
|
4.7
|
30.8
|
1.0
|
|
O2A
|
B:ADP401
|
4.8
|
22.7
|
1.0
|
|
O
|
B:VAL159
|
4.8
|
23.4
|
1.0
|
|
PA
|
B:ADP401
|
4.9
|
22.7
|
1.0
|
|
Fluorine binding site 9 out
of 15 in 8a2r
Go back to
Fluorine Binding Sites List in 8a2r
Fluorine binding site 9 out
of 15 in the Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State.
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F403
b:23.5
occ:1.00
|
F3
|
B:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
B:BEF403
|
1.5
|
23.5
|
1.0
|
|
O3B
|
B:ADP401
|
2.3
|
22.7
|
1.0
|
|
F2
|
B:BEF403
|
2.5
|
23.5
|
1.0
|
|
F1
|
B:BEF403
|
2.5
|
23.5
|
1.0
|
|
OG
|
B:SER14
|
2.8
|
24.1
|
1.0
|
|
N
|
B:SER14
|
2.8
|
24.1
|
1.0
|
|
O
|
B:HOH593
|
2.9
|
31.3
|
1.0
|
|
CB
|
B:SER14
|
3.3
|
24.1
|
1.0
|
|
PB
|
B:ADP401
|
3.6
|
22.7
|
1.0
|
|
CA
|
B:SER14
|
3.6
|
24.1
|
1.0
|
|
C
|
B:GLY13
|
3.7
|
25.1
|
1.0
|
|
CA
|
B:GLY13
|
3.7
|
25.1
|
1.0
|
|
O
|
B:HOH526
|
3.8
|
27.7
|
1.0
|
|
O2B
|
B:ADP401
|
4.1
|
22.7
|
1.0
|
|
MG
|
B:MG402
|
4.1
|
25.1
|
1.0
|
|
N
|
B:GLY158
|
4.1
|
23.6
|
1.0
|
|
O1B
|
B:ADP401
|
4.3
|
22.7
|
1.0
|
|
N
|
B:VAL159
|
4.5
|
23.4
|
1.0
|
|
N
|
B:ASP157
|
4.5
|
23.2
|
1.0
|
|
CA
|
B:GLY74
|
4.5
|
27.4
|
1.0
|
|
CA
|
B:GLY158
|
4.5
|
23.6
|
1.0
|
|
CG2
|
B:VAL159
|
4.7
|
23.4
|
1.0
|
|
N
|
B:GLY74
|
4.7
|
27.4
|
1.0
|
|
O3A
|
B:ADP401
|
4.7
|
22.7
|
1.0
|
|
C
|
B:SER14
|
4.8
|
24.1
|
1.0
|
|
O
|
B:HOH501
|
4.8
|
25.4
|
1.0
|
|
O
|
B:GLY13
|
4.8
|
25.1
|
1.0
|
|
N
|
B:GLY15
|
4.9
|
23.8
|
1.0
|
|
CB
|
B:VAL159
|
5.0
|
23.4
|
1.0
|
|
C
|
B:GLY158
|
5.0
|
23.6
|
1.0
|
|
Fluorine binding site 10 out
of 15 in 8a2r
Go back to
Fluorine Binding Sites List in 8a2r
Fluorine binding site 10 out
of 15 in the Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State.
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 10 of Cryo-Em Structure of F-Actin in the MG2+-Adp-BEF3- Nucleotide State. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:F403
b:23.5
occ:1.00
|
F1
|
D:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
D:BEF403
|
1.5
|
23.5
|
1.0
|
|
F3
|
D:BEF403
|
2.5
|
23.5
|
1.0
|
|
O3B
|
D:ADP401
|
2.6
|
22.7
|
1.0
|
|
F2
|
D:BEF403
|
2.6
|
23.5
|
1.0
|
|
N
|
D:GLY158
|
2.7
|
23.6
|
1.0
|
|
N
|
D:VAL159
|
2.8
|
23.4
|
1.0
|
|
N
|
D:ASP157
|
2.9
|
23.2
|
1.0
|
|
CA
|
D:GLY156
|
3.3
|
21.9
|
1.0
|
|
C
|
D:GLY156
|
3.3
|
21.9
|
1.0
|
|
CA
|
D:GLY158
|
3.4
|
23.6
|
1.0
|
|
O
|
D:VAL159
|
3.4
|
23.4
|
1.0
|
|
O
|
D:HOH504
|
3.5
|
25.1
|
1.0
|
|
C
|
D:GLY158
|
3.6
|
23.6
|
1.0
|
|
N
|
D:GLY156
|
3.6
|
21.9
|
1.0
|
|
C
|
D:ASP157
|
3.7
|
23.2
|
1.0
|
|
CA
|
D:VAL159
|
3.7
|
23.4
|
1.0
|
|
CA
|
D:ASP157
|
3.8
|
23.2
|
1.0
|
|
PB
|
D:ADP401
|
3.9
|
22.7
|
1.0
|
|
CB
|
D:VAL159
|
4.0
|
23.4
|
1.0
|
|
C
|
D:VAL159
|
4.0
|
23.4
|
1.0
|
|
OG
|
D:SER14
|
4.1
|
24.1
|
1.0
|
|
O3A
|
D:ADP401
|
4.3
|
22.7
|
1.0
|
|
O
|
D:GLY156
|
4.3
|
21.9
|
1.0
|
|
CG2
|
D:VAL159
|
4.3
|
23.4
|
1.0
|
|
O
|
D:HOH590
|
4.3
|
31.9
|
1.0
|
|
MG
|
D:MG402
|
4.4
|
25.1
|
1.0
|
|
CB
|
D:SER14
|
4.4
|
24.1
|
1.0
|
|
CB
|
D:ASP157
|
4.6
|
23.2
|
1.0
|
|
O2B
|
D:ADP401
|
4.6
|
22.7
|
1.0
|
|
CB
|
D:ALA181
|
4.6
|
22.8
|
1.0
|
|
O
|
D:HOH512
|
4.6
|
22.6
|
1.0
|
|
N
|
D:SER14
|
4.7
|
24.1
|
1.0
|
|
O
|
D:GLY158
|
4.8
|
23.6
|
1.0
|
|
O
|
D:ASP157
|
4.8
|
23.2
|
1.0
|
|
C
|
D:SER155
|
4.9
|
22.4
|
1.0
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Reference:
W.Oosterheert,
B.U.Klink,
A.Belyy,
S.Pospich,
S.Raunser.
Structural Basis of Actin Filament Assembly and Aging. Nature V. 611 374 2022.
ISSN: ESSN 1476-4687
PubMed: 36289337
DOI: 10.1038/S41586-022-05241-8
Page generated: Fri Aug 2 16:24:31 2024
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