Fluorine in PDB 8aau: Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3

Enzymatic activity of Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3

All present enzymatic activity of Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3:
2.7.11.1;

Protein crystallography data

The structure of Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3, PDB code: 8aau was solved by S.Mathea, E.Salah, T.Hanke, S.Knapp, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 68.71 / 1.74
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 85.668, 85.668, 182.108, 90, 90, 120
R / Rfree (%) 21.1 / 24

Other elements in 8aau:

The structure of Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Magnesium (Mg) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3 (pdb code 8aau). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3, PDB code: 8aau:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 8aau

Go back to Fluorine Binding Sites List in 8aau
Fluorine binding site 1 out of 2 in the Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3 within 5.0Å range:
probe atom residue distance (Å) B Occ
L:F702

b:42.4
occ:1.00
F1 L:LH0702 0.0 42.4 1.0
C7 L:LH0702 1.3 39.2 1.0
F L:LH0702 2.1 43.1 1.0
C6 L:LH0702 2.4 35.0 1.0
O L:HOH865 2.9 41.4 1.0
C8 L:LH0702 3.2 36.0 1.0
O L:HOH801 3.3 38.2 1.0
N1 L:LH0702 3.4 37.5 1.0
CG2 L:THR413 3.4 31.3 1.0
CE1 L:PHE411 3.7 36.0 1.0
CZ L:PHE411 4.1 35.0 1.0
OG1 L:THR413 4.1 29.8 1.0
OE2 L:GLU384 4.3 36.5 1.0
SD L:MET388 4.3 38.4 1.0
C9 L:LH0702 4.4 33.3 1.0
CB L:THR413 4.4 30.7 1.0
CD2 L:LEU397 4.4 33.6 1.0
N L:LH0702 4.4 34.0 1.0
O L:HOH855 4.5 41.6 1.0
CE L:MET388 4.9 37.2 1.0
CD L:LYS368 4.9 43.4 1.0
CD1 L:PHE411 4.9 34.0 1.0

Fluorine binding site 2 out of 2 in 8aau

Go back to Fluorine Binding Sites List in 8aau
Fluorine binding site 2 out of 2 in the Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3 within 5.0Å range:
probe atom residue distance (Å) B Occ
L:F702

b:43.1
occ:1.00
F L:LH0702 0.0 43.1 1.0
C7 L:LH0702 1.3 39.2 1.0
F1 L:LH0702 2.1 42.4 1.0
C6 L:LH0702 2.4 35.0 1.0
C8 L:LH0702 3.1 36.0 1.0
N1 L:LH0702 3.4 37.5 1.0
CG1 L:VAL366 3.6 37.1 1.0
CB L:LYS368 3.6 39.3 1.0
CG2 L:THR413 4.1 31.3 1.0
CE1 L:PHE411 4.2 36.0 1.0
CB L:ALA353 4.2 42.7 1.0
OG1 L:THR413 4.2 29.8 1.0
CD L:LYS368 4.2 43.4 1.0
C9 L:LH0702 4.3 33.3 1.0
N L:LH0702 4.4 34.0 1.0
N L:LYS368 4.4 39.5 1.0
CG L:LYS368 4.4 42.7 1.0
CZ L:PHE411 4.5 35.0 1.0
CA L:LYS368 4.5 40.8 1.0
CB L:VAL366 4.5 34.6 1.0
O L:HOH865 4.8 41.4 1.0
CB L:THR413 4.8 30.7 1.0
C L:MET367 4.9 39.3 1.0
O L:VAL366 5.0 31.8 1.0

Reference:

S.Mathea, E.Salah, T.Hanke, S.Knapp. Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3 To Be Published.
Page generated: Wed Apr 5 02:04:18 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy