Fluorine in PDB 8b3d: Structure of the Pol II-Tcr-ELOF1 Complex.

All present enzymatic activity of Structure of the Pol II-Tcr-ELOF1 Complex.:
2.7.7.6;

The structure of Structure of the Pol II-Tcr-ELOF1 Complex. also contains other interesting chemical elements:

Zinc	(Zn)	10 atoms
Magnesium	(Mg)	2 atoms

The binding sites of Fluorine atom in the Structure of the Pol II-Tcr-ELOF1 Complex. (pdb code 8b3d). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 3 binding sites of Fluorine where determined in the Structure of the Pol II-Tcr-ELOF1 Complex., PDB code: 8b3d:
Jump to Fluorine binding site number: 1; 2; 3;

Fluorine binding site 1 out of 3 in the Structure of the Pol II-Tcr-ELOF1 Complex.


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Structure of the Pol II-Tcr-ELOF1 Complex. within 5.0Å range: probe atom residue distance (Å) B Occ b:F1502 b:30.9 occ:1.00 F1 b:BEF1502 0.0 30.9 1.0 BE b:BEF1502 1.5 30.9 1.0 HH12 b:ARG950 1.8 34.3 1.0 HH22 b:ARG950 2.1 34.3 1.0 O3B b:ADP1501 2.2 37.1 1.0 HH22 b:ARG947 2.4 31.6 1.0 F3 b:BEF1502 2.5 30.9 1.0 F2 b:BEF1502 2.6 30.9 1.0 NH1 b:ARG950 2.6 34.3 1.0 H b:GLY535 2.7 31.9 1.0 HA b:MET534 2.7 34.4 1.0 HH12 b:ARG947 2.7 31.6 1.0 NH2 b:ARG950 2.8 34.3 1.0 HB3 b:MET534 3.0 34.4 1.0 HG3 b:MET534 3.1 34.4 1.0 CZ b:ARG950 3.1 34.3 1.0 HA2 b:GLY920 3.1 30.0 1.0 PB b:ADP1501 3.2 37.1 1.0 NH2 b:ARG947 3.3 31.6 1.0 N b:GLY535 3.3 31.9 1.0 HH11 b:ARG950 3.3 34.3 1.0 CA b:MET534 3.4 34.4 1.0 CB b:MET534 3.5 34.4 1.0 O1B b:ADP1501 3.5 37.1 1.0 NH1 b:ARG947 3.5 31.6 1.0 HH21 b:ARG950 3.6 34.3 1.0 O3A b:ADP1501 3.7 37.1 1.0 CG b:MET534 3.7 34.4 1.0 C b:MET534 3.8 34.4 1.0 CZ b:ARG947 3.8 31.6 1.0 HZ1 b:LYS538 3.9 32.0 1.0 HH21 b:ARG947 3.9 31.6 1.0 CA b:GLY920 4.1 30.0 1.0 HA2 b:GLY535 4.1 31.9 1.0 HH11 b:ARG947 4.2 31.6 1.0 HG2 b:MET534 4.2 34.4 1.0 H b:GLY920 4.2 30.0 1.0 CA b:GLY535 4.3 31.9 1.0 MG b:MG1503 4.3 18.3 1.0 HB2 b:MET534 4.4 34.4 1.0 HZ3 b:LYS538 4.4 32.0 1.0 NE b:ARG950 4.4 34.3 1.0 NZ b:LYS538 4.6 32.0 1.0 O b:GLY920 4.6 30.0 1.0 O2B b:ADP1501 4.6 37.1 1.0 C b:GLY920 4.6 30.0 1.0 N b:GLY920 4.6 30.0 1.0 HA3 b:GLY920 4.6 30.0 1.0 N b:MET534 4.7 34.4 1.0 OE2 b:GLU647 4.7 30.0 1.0 HA3 b:GLY535 4.8 31.9 1.0 HE b:ARG950 4.9 34.3 1.0 O b:MET534 4.9 34.4 1.0

Fluorine binding site 2 out of 3 in the Structure of the Pol II-Tcr-ELOF1 Complex.


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Structure of the Pol II-Tcr-ELOF1 Complex. within 5.0Å range: probe atom residue distance (Å) B Occ b:F1502 b:30.9 occ:1.00 F2 b:BEF1502 0.0 30.9 1.0 BE b:BEF1502 1.6 30.9 1.0 HZ1 b:LYS538 2.0 32.0 1.0 F3 b:BEF1502 2.5 30.9 1.0 F1 b:BEF1502 2.6 30.9 1.0 HG3 b:MET534 2.6 34.4 1.0 HA b:MET534 2.7 34.4 1.0 NZ b:LYS538 2.9 32.0 1.0 O3B b:ADP1501 3.0 37.1 1.0 HZ3 b:LYS538 3.2 32.0 1.0 H b:GLY675 3.4 31.3 1.0 O1B b:ADP1501 3.4 37.1 1.0 HZ2 b:LYS538 3.4 32.0 1.0 CG b:MET534 3.5 34.4 1.0 HE2 b:LYS538 3.5 32.0 1.0 CA b:MET534 3.5 34.4 1.0 CE b:LYS538 3.6 32.0 1.0 HE3 b:LYS538 3.6 32.0 1.0 HH22 b:ARG947 3.7 31.6 1.0 PB b:ADP1501 3.7 37.1 1.0 H b:GLY535 3.9 31.9 1.0 OE2 b:GLU647 3.9 30.0 1.0 CB b:MET534 3.9 34.4 1.0 OE1 b:GLU647 4.0 30.0 1.0 SD b:MET534 4.1 34.4 1.0 HB3 b:MET534 4.1 34.4 1.0 HA3 b:GLY675 4.1 31.3 1.0 HA2 b:GLY920 4.1 30.0 1.0 N b:GLY675 4.1 31.3 1.0 HH12 b:ARG950 4.2 34.3 1.0 N b:MET534 4.2 34.4 1.0 HG2 b:MET534 4.2 34.4 1.0 MG b:MG1503 4.3 18.3 1.0 CD b:GLU647 4.4 30.0 1.0 HH22 b:ARG950 4.4 34.3 1.0 HA b:SER674 4.5 28.6 1.0 NH2 b:ARG947 4.5 31.6 1.0 H b:MET534 4.5 34.4 1.0 N b:GLY535 4.5 31.9 1.0 C b:MET534 4.6 34.4 1.0 O b:GLU533 4.7 34.4 1.0 C b:GLU533 4.7 34.4 1.0 CA b:GLY675 4.7 31.3 1.0 O2B b:ADP1501 4.7 37.1 1.0 HH21 b:ARG947 4.8 31.6 1.0 HB2 b:MET534 4.8 34.4 1.0 OE1 b:GLN943 4.8 32.6 1.0 HH12 b:ARG947 4.9 31.6 1.0 O b:ASP532 4.9 34.0 1.0 O3A b:ADP1501 5.0 37.1 1.0

Fluorine binding site 3 out of 3 in the Structure of the Pol II-Tcr-ELOF1 Complex.


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Structure of the Pol II-Tcr-ELOF1 Complex. within 5.0Å range: probe atom residue distance (Å) B Occ b:F1502 b:30.9 occ:1.00 F3 b:BEF1502 0.0 30.9 1.0 BE b:BEF1502 1.5 30.9 1.0 MG b:MG1503 2.0 18.3 1.0 O1B b:ADP1501 2.2 37.1 1.0 F2 b:BEF1502 2.5 30.9 1.0 F1 b:BEF1502 2.5 30.9 1.0 HA2 b:GLY920 2.5 30.0 1.0 PB b:ADP1501 3.1 37.1 1.0 O3B b:ADP1501 3.2 37.1 1.0 OE2 b:GLU647 3.2 30.0 1.0 HH12 b:ARG950 3.3 34.3 1.0 CA b:GLY920 3.4 30.0 1.0 HA3 b:GLY920 3.4 30.0 1.0 O3A b:ADP1501 3.7 37.1 1.0 HZ1 b:LYS538 3.8 32.0 1.0 CD b:GLU647 4.0 30.0 1.0 O b:GLY920 4.1 30.0 1.0 HH12 b:ARG947 4.1 31.6 1.0 NH1 b:ARG950 4.1 34.3 1.0 HE2 b:LYS538 4.1 32.0 1.0 HH22 b:ARG947 4.1 31.6 1.0 C b:GLY920 4.2 30.0 1.0 N b:GLY920 4.3 30.0 1.0 HZ3 b:LYS538 4.3 32.0 1.0 HH11 b:ARG950 4.4 34.3 1.0 H b:GLY920 4.4 30.0 1.0 HG3 b:MET534 4.4 34.4 1.0 NZ b:LYS538 4.4 32.0 1.0 OE1 b:GLU647 4.4 30.0 1.0 OD1 b:ASP646 4.4 29.1 1.0 HA b:MET534 4.4 34.4 1.0 O2B b:ADP1501 4.5 37.1 1.0 H b:GLY535 4.6 31.9 1.0 HH22 b:ARG950 4.6 34.3 1.0 CE b:LYS538 4.8 32.0 1.0 NH1 b:ARG947 4.8 31.6 1.0 HG2 b:GLU647 4.9 30.0 1.0 NH2 b:ARG947 4.9 31.6 1.0 HB2 b:LYS538 4.9 32.0 1.0 OD2 b:ASP646 4.9 29.1 1.0 PA b:ADP1501 5.0 37.1 1.0

G.Kokic, P.Cramer. Structure of the Pol II-Tcr-ELOF1 Complex. To Be Published.