Fluorine in PDB 8byn: Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir (pdb code 8byn). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 6 binding sites of Fluorine where determined in the Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir, PDB code: 8byn:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6;

Fluorine binding site 1 out of 6 in 8byn

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Fluorine binding site 1 out of 6 in the Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F501

b:12.1
occ:1.00
F1 A:S9C501 0.0 12.1 1.0
C16 A:S9C501 1.4 12.1 1.0
N3 A:S9C501 2.3 12.1 1.0
C15 A:S9C501 2.3 12.1 1.0
C13 A:S9C501 3.5 12.1 1.0
C14 A:S9C501 3.5 12.1 1.0
C13 E:S9C501 3.6 12.2 1.0
C11 E:S9C501 3.7 12.2 1.0
C15 E:S9C501 3.8 12.2 1.0
C14 E:S9C501 3.9 12.2 1.0
C16 E:S9C501 4.0 12.2 1.0
C11 A:S9C501 4.1 12.1 1.0
N3 E:S9C501 4.1 12.2 1.0
C6 E:S9C501 4.3 12.2 1.0
F1 E:S9C501 4.8 12.2 1.0
C8 E:S9C501 4.8 12.2 1.0
C5 E:S9C501 4.9 12.2 1.0

Fluorine binding site 2 out of 6 in 8byn

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Fluorine binding site 2 out of 6 in the Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F501

b:11.6
occ:1.00
F1 B:S9C501 0.0 11.6 1.0
C16 B:S9C501 1.4 11.6 1.0
C15 B:S9C501 2.3 11.6 1.0
N3 B:S9C501 2.3 11.6 1.0
C13 B:S9C501 3.5 11.6 1.0
C14 B:S9C501 3.5 11.6 1.0
C13 F:S9C501 3.7 11.8 1.0
C11 F:S9C501 3.7 11.8 1.0
C15 F:S9C501 3.8 11.8 1.0
C14 F:S9C501 3.9 11.8 1.0
C16 F:S9C501 4.0 11.8 1.0
C11 B:S9C501 4.1 11.6 1.0
N3 F:S9C501 4.1 11.8 1.0
C6 F:S9C501 4.3 11.8 1.0
F1 F:S9C501 4.8 11.8 1.0
C8 F:S9C501 4.8 11.8 1.0
C5 F:S9C501 5.0 11.8 1.0

Fluorine binding site 3 out of 6 in 8byn

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Fluorine binding site 3 out of 6 in the Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir within 5.0Å range:
probe atom residue distance (Å) B Occ
E:F501

b:12.2
occ:1.00
F1 E:S9C501 0.0 12.2 1.0
C16 E:S9C501 1.4 12.2 1.0
N3 E:S9C501 2.3 12.2 1.0
C15 E:S9C501 2.3 12.2 1.0
C13 E:S9C501 3.5 12.2 1.0
C14 E:S9C501 3.5 12.2 1.0
C13 E:S9C502 3.7 12.8 1.0
C11 E:S9C502 3.7 12.8 1.0
C15 E:S9C502 3.9 12.8 1.0
C14 E:S9C502 3.9 12.8 1.0
C16 E:S9C502 4.0 12.8 1.0
C11 E:S9C501 4.1 12.2 1.0
N3 E:S9C502 4.1 12.8 1.0
C6 E:S9C502 4.3 12.8 1.0
F1 E:S9C502 4.8 12.8 1.0
F1 A:S9C501 4.8 12.1 1.0
C8 E:S9C502 4.8 12.8 1.0
C5 E:S9C502 5.0 12.8 1.0

Fluorine binding site 4 out of 6 in 8byn

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Fluorine binding site 4 out of 6 in the Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir within 5.0Å range:
probe atom residue distance (Å) B Occ
E:F502

b:12.8
occ:1.00
F1 E:S9C502 0.0 12.8 1.0
C16 E:S9C502 1.4 12.8 1.0
C15 E:S9C502 2.3 12.8 1.0
N3 E:S9C502 2.3 12.8 1.0
C13 E:S9C502 3.5 12.8 1.0
C14 E:S9C502 3.5 12.8 1.0
C11 E:S9C502 4.1 12.8 1.0
F1 E:S9C501 4.8 12.2 1.0

Fluorine binding site 5 out of 6 in 8byn

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Fluorine binding site 5 out of 6 in the Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir within 5.0Å range:
probe atom residue distance (Å) B Occ
F:F501

b:11.8
occ:1.00
F1 F:S9C501 0.0 11.8 1.0
C16 F:S9C501 1.4 11.8 1.0
C15 F:S9C501 2.3 11.8 1.0
N3 F:S9C501 2.3 11.8 1.0
C13 F:S9C501 3.5 11.8 1.0
C14 F:S9C501 3.5 11.8 1.0
C13 F:S9C502 3.7 12.5 1.0
C11 F:S9C502 3.7 12.5 1.0
C15 F:S9C502 3.8 12.5 1.0
C14 F:S9C502 3.9 12.5 1.0
C16 F:S9C502 4.0 12.5 1.0
C11 F:S9C501 4.1 11.8 1.0
N3 F:S9C502 4.1 12.5 1.0
C6 F:S9C502 4.3 12.5 1.0
F1 B:S9C501 4.8 11.6 1.0
F1 F:S9C502 4.8 12.5 1.0
C8 F:S9C502 4.8 12.5 1.0
C5 F:S9C502 4.9 12.5 1.0

Fluorine binding site 6 out of 6 in 8byn

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Fluorine binding site 6 out of 6 in the Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir within 5.0Å range:
probe atom residue distance (Å) B Occ
F:F502

b:12.5
occ:1.00
F1 F:S9C502 0.0 12.5 1.0
C16 F:S9C502 1.4 12.5 1.0
C15 F:S9C502 2.3 12.5 1.0
N3 F:S9C502 2.3 12.5 1.0
C13 F:S9C502 3.5 12.5 1.0
C14 F:S9C502 3.5 12.5 1.0
C11 F:S9C502 4.1 12.5 1.0
F1 F:S9C501 4.8 11.8 1.0

Reference:

Y.Shi, B.Ghetti, M.Goedert, S.H.W.Scheres. Cryo-Em Structures of Chronic Traumatic Encephalopathy Tau Filaments with Pet Ligand Flortaucipir To Be Published.
Page generated: Wed Apr 5 02:10:01 2023

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