Fluorine in PDB 8cf2: Solution Structure of the Rna Helix Formed By the 5'-End of U1 Snrna and An A-1 Bulged 5'-Splice Site in Complex with Smn-Cy

The binding sites of Fluorine atom in the Solution Structure of the Rna Helix Formed By the 5'-End of U1 Snrna and An A-1 Bulged 5'-Splice Site in Complex with Smn-Cy (pdb code 8cf2). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Solution Structure of the Rna Helix Formed By the 5'-End of U1 Snrna and An A-1 Bulged 5'-Splice Site in Complex with Smn-Cy, PDB code: 8cf2:

Fluorine binding site 1 out of 1 in the Solution Structure of the Rna Helix Formed By the 5'-End of U1 Snrna and An A-1 Bulged 5'-Splice Site in Complex with Smn-Cy


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Solution Structure of the Rna Helix Formed By the 5'-End of U1 Snrna and An A-1 Bulged 5'-Splice Site in Complex with Smn-Cy within 5.0Å range: probe atom residue distance (Å) B Occ A:F101 b:0.0 occ:1.00 F9 A:ULR101 0.0 0.0 1.0 C8 A:ULR101 1.3 0.0 1.0 H18 A:ULR101 2.2 0.0 1.0 C10 A:ULR101 2.4 0.0 1.0 C7 A:ULR101 2.4 0.0 1.0 H10 A:ULR101 2.6 0.0 1.0 N18 A:ULR101 2.8 0.0 1.0 C16 A:ULR101 2.9 0.0 1.0 H42 A:C8 3.2 0.0 1.0 H15C A:ULR101 3.4 0.0 1.0 C11 A:ULR101 3.6 0.0 1.0 C13 A:ULR101 3.7 0.0 1.0 H15B A:ULR101 3.8 0.0 1.0 N4 A:C8 3.8 0.0 1.0 O17 A:ULR101 4.1 0.0 1.0 C19 A:ULR101 4.1 0.0 1.0 C15 A:ULR101 4.1 0.0 1.0 C12 A:ULR101 4.1 0.0 1.0 H41 A:C8 4.2 0.0 1.0 N20 A:ULR101 4.3 0.0 1.0 H5 A:C8 4.4 0.0 1.0 H1B A:ULR101 4.4 0.0 1.0 H13 A:ULR101 4.6 0.0 1.0 C4 A:C8 4.7 0.0 1.0 N2 A:ULR101 4.8 0.0 1.0 H15A A:ULR101 4.9 0.0 1.0 H14B A:ULR101 4.9 0.0 1.0 C5 A:C8 4.9 0.0 1.0

F.Malard, J.Marquevielle, S.Campagne. The Diversity of Splicing Modifiers Acting on A-1 Bulged 5'-Splice Sites Reveals Rules to Guide Rational Design To Be Published.