Fluorine in PDB 8e5b: Human L-Type Voltage-Gated Calcium Channel CAV1.3 in the Presence of Amiodarone and Sofosbuvir at 3.3 Angstrom Resolution

Other elements in 8e5b:

The structure of Human L-Type Voltage-Gated Calcium Channel CAV1.3 in the Presence of Amiodarone and Sofosbuvir at 3.3 Angstrom Resolution also contains other interesting chemical elements:

Calcium (Ca) 2 atoms
Iodine (I) 2 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Human L-Type Voltage-Gated Calcium Channel CAV1.3 in the Presence of Amiodarone and Sofosbuvir at 3.3 Angstrom Resolution (pdb code 8e5b). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Human L-Type Voltage-Gated Calcium Channel CAV1.3 in the Presence of Amiodarone and Sofosbuvir at 3.3 Angstrom Resolution, PDB code: 8e5b:

Fluorine binding site 1 out of 1 in 8e5b

Go back to Fluorine Binding Sites List in 8e5b
Fluorine binding site 1 out of 1 in the Human L-Type Voltage-Gated Calcium Channel CAV1.3 in the Presence of Amiodarone and Sofosbuvir at 3.3 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Human L-Type Voltage-Gated Calcium Channel CAV1.3 in the Presence of Amiodarone and Sofosbuvir at 3.3 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F2202

b:44.3
occ:1.00
F28 A:WG62202 0.0 44.3 1.0
C16 A:WG62202 1.4 44.3 1.0
C17 A:WG62202 2.4 44.3 1.0
C27 A:WG62202 2.4 44.3 1.0
C15 A:WG62202 2.5 44.3 1.0
O29 A:WG62202 2.6 44.3 1.0
O26 A:WG62202 2.7 44.3 1.0
N19 A:WG62202 3.2 44.3 1.0
C25 A:WG62202 3.2 44.3 1.0
O18 A:WG62202 3.4 44.3 1.0
C14 A:WG62202 3.5 44.3 1.0
CD1 A:LEU744 4.1 18.0 1.0
OD1 A:ASN740 4.2 20.4 1.0
C20 A:WG62202 4.5 44.3 1.0
N24 A:WG62202 4.6 44.3 1.0
CB A:LEU743 4.7 15.8 1.0
O A:ASN740 4.9 20.4 1.0
C35 A:WG62202 4.9 44.3 1.0

Reference:

X.Yao, S.Gao, J.Wang, Z.Li, J.Huang, Y.Wang, Z.Wang, J.Chen, X.Fan, W.Wang, X.Jin, X.Pan, Y.Yu, A.Lagrutta, N.Yan. Structural Basis For the Severe Adverse Interaction of Sofosbuvir and Amiodarone on L-Type Ca V Channels. Cell V. 185 4801 2022.
ISSN: ISSN 1097-4172
PubMed: 36417914
DOI: 10.1016/J.CELL.2022.10.024
Page generated: Wed Apr 5 02:17:17 2023

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