Fluorine in PDB 8eio: The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg

Enzymatic activity of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg

All present enzymatic activity of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg:
5.6.1.6;

Other elements in 8eio:

The structure of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg (pdb code 8eio). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 5 binding sites of Fluorine where determined in the The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg, PDB code: 8eio:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5;

Fluorine binding site 1 out of 5 in 8eio

Go back to Fluorine Binding Sites List in 8eio
Fluorine binding site 1 out of 5 in the The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1507

b:60.8
occ:1.00
F1 A:VX81507 0.0 60.8 1.0
C20 A:VX81507 1.4 60.0 1.0
F2 A:VX81507 2.2 60.6 1.0
O5 A:VX81507 2.3 62.3 1.0
O4 A:VX81507 2.3 59.6 1.0
OG A:SER364 3.1 47.8 1.0
C16 A:VX81507 3.2 58.0 1.0
C17 A:VX81507 3.2 60.4 1.0
CD1 A:LEU195 3.6 54.5 1.0
CB A:SER364 3.8 41.6 1.0
CG2 A:THR360 3.9 30.1 1.0
CG A:LEU195 4.0 47.7 1.0
CB A:ALA198 4.2 34.9 1.0
CA A:LEU195 4.3 39.0 1.0
N A:LEU195 4.3 34.7 1.0
C A:GLY194 4.3 44.1 1.0
O A:GLY194 4.4 51.9 1.0
C15 A:VX81507 4.4 59.2 1.0
C18 A:VX81507 4.4 57.5 1.0
CB A:LEU195 4.8 40.0 1.0
CA A:GLY194 4.9 43.1 1.0
O A:THR360 4.9 35.4 1.0

Fluorine binding site 2 out of 5 in 8eio

Go back to Fluorine Binding Sites List in 8eio
Fluorine binding site 2 out of 5 in the The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1507

b:60.6
occ:1.00
F2 A:VX81507 0.0 60.6 1.0
C20 A:VX81507 1.4 60.0 1.0
F1 A:VX81507 2.2 60.8 1.0
O4 A:VX81507 2.3 59.6 1.0
O5 A:VX81507 2.3 62.3 1.0
C16 A:VX81507 3.3 58.0 1.0
C17 A:VX81507 3.3 60.4 1.0
CD2 A:TRP361 3.3 37.1 1.0
CB A:ALA198 3.5 34.9 1.0
CE2 A:TRP361 3.5 35.3 1.0
CE3 A:TRP361 3.5 39.8 1.0
CG A:TRP361 3.8 28.4 1.0
CG2 A:THR360 3.8 30.1 1.0
OG A:SER364 3.8 47.8 1.0
CZ3 A:TRP361 3.9 39.6 1.0
CZ2 A:TRP361 3.9 35.5 1.0
CA A:TRP361 4.0 26.6 1.0
NE1 A:TRP361 4.0 42.7 1.0
CB A:SER364 4.1 41.6 1.0
CH2 A:TRP361 4.1 42.4 1.0
CD1 A:TRP361 4.1 33.9 1.0
N A:TRP361 4.2 33.3 1.0
O A:THR360 4.2 35.4 1.0
C A:THR360 4.3 28.9 1.0
CB A:TRP361 4.5 28.5 1.0
CA A:ALA198 4.5 28.2 1.0
C15 A:VX81507 4.6 59.2 1.0
C18 A:VX81507 4.6 57.5 1.0
CB A:THR360 4.7 29.1 1.0

Fluorine binding site 3 out of 5 in 8eio

Go back to Fluorine Binding Sites List in 8eio
Fluorine binding site 3 out of 5 in the The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1508

b:67.7
occ:1.00
F A:WJX1508 0.0 67.7 1.0
C17 A:WJX1508 1.3 68.0 1.0
F2 A:WJX1508 2.1 68.2 1.0
F1 A:WJX1508 2.1 69.9 1.0
C14 A:WJX1508 2.4 65.4 1.0
C15 A:WJX1508 2.7 59.4 1.0
CD1 A:ILE132 2.8 48.9 1.0
C16 A:WJX1508 3.2 59.9 1.0
C13 A:WJX1508 3.6 65.3 1.0
CG1 A:ILE132 4.1 49.4 1.0
CG2 A:ILE132 4.3 44.1 1.0
O A:WJX1508 4.7 65.5 1.0
CB A:ILE132 4.8 44.1 1.0

Fluorine binding site 4 out of 5 in 8eio

Go back to Fluorine Binding Sites List in 8eio
Fluorine binding site 4 out of 5 in the The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1508

b:69.9
occ:1.00
F1 A:WJX1508 0.0 69.9 1.0
C17 A:WJX1508 1.3 68.0 1.0
F A:WJX1508 2.1 67.7 1.0
F2 A:WJX1508 2.1 68.2 1.0
C14 A:WJX1508 2.4 65.4 1.0
C13 A:WJX1508 2.6 65.3 1.0
C15 A:WJX1508 3.2 59.4 1.0
C16 A:WJX1508 3.7 59.9 1.0
O A:WJX1508 4.0 65.5 1.0
CD1 A:ILE132 4.7 48.9 1.0
CE1 A:PHE16 4.9 49.3 1.0
CZ A:PHE16 4.9 51.0 1.0
C12 A:WJX1508 4.9 59.4 1.0

Fluorine binding site 5 out of 5 in 8eio

Go back to Fluorine Binding Sites List in 8eio
Fluorine binding site 5 out of 5 in the The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1508

b:68.2
occ:1.00
F2 A:WJX1508 0.0 68.2 1.0
C17 A:WJX1508 1.3 68.0 1.0
F A:WJX1508 2.1 67.7 1.0
F1 A:WJX1508 2.1 69.9 1.0
C14 A:WJX1508 2.4 65.4 1.0
C16 A:WJX1508 2.7 59.9 1.0
C13 A:WJX1508 3.1 65.3 1.0
CD1 A:ILE132 3.4 48.9 1.0
C15 A:WJX1508 3.7 59.4 1.0
O A:WJX1508 4.5 65.5 1.0
CG2 A:ILE132 4.5 44.1 1.0
CG A:MET1105 4.7 50.9 1.0
CG1 A:ILE132 4.8 49.4 1.0
CE A:MET1105 4.9 51.4 1.0

Reference:

K.Fiedorczuk, J.Chen. Molecular Structures Reveal Synergistic Rescue of Delta 508 Cftr By Trikafta Modulators. Science V. 378 284 2022.
ISSN: ESSN 1095-9203
PubMed: 36264792
DOI: 10.1126/SCIENCE.ADE2216
Page generated: Fri Aug 2 18:10:30 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy