Fluorine in PDB 8fi2: Structure of Lettuce C20T Bound to Dfhbi-1T

The structure of Structure of Lettuce C20T Bound to Dfhbi-1T, PDB code: 8fi2 was solved by L.F.M.Passalacqua, A.R.Ferre-D'amare, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.73 / 3.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	24.841, 44.565, 119.59, 90, 90, 90
R / Rfree (%)	24.4 / 28.7

The structure of Structure of Lettuce C20T Bound to Dfhbi-1T also contains other interesting chemical elements:

Magnesium	(Mg)	3 atoms
Potassium	(K)	2 atoms

The binding sites of Fluorine atom in the Structure of Lettuce C20T Bound to Dfhbi-1T (pdb code 8fi2). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 5 binding sites of Fluorine where determined in the Structure of Lettuce C20T Bound to Dfhbi-1T, PDB code: 8fi2:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5;

Fluorine binding site 1 out of 5 in the Structure of Lettuce C20T Bound to Dfhbi-1T


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Structure of Lettuce C20T Bound to Dfhbi-1T within 5.0Å range: probe atom residue distance (Å) B Occ A:F106 b:39.3 occ:1.00 F8 A:2ZY106 0.0 39.3 1.0 C6 A:2ZY106 1.4 44.6 1.0 C1 A:2ZY106 2.4 39.3 1.0 C5 A:2ZY106 2.4 45.0 1.0 O9 A:2ZY106 2.8 37.1 1.0 N6 A:DA11 2.9 37.3 1.0 N3 A:DC17 3.2 41.7 1.0 C4 A:DC17 3.2 40.8 1.0 C2 A:DC17 3.2 51.8 1.0 C5 A:DC17 3.3 42.2 1.0 N1 A:DC17 3.3 52.7 1.0 C6 A:DC17 3.4 47.7 1.0 N1 A:DG18 3.4 41.7 1.0 C2 A:DG18 3.5 37.6 1.0 C2 A:2ZY106 3.6 48.0 1.0 C4 A:2ZY106 3.6 41.7 1.0 C6 A:DG18 3.7 36.4 1.0 N4 A:DC17 3.9 41.5 1.0 O2 A:DC17 3.9 56.3 1.0 N2 A:DG18 3.9 43.2 1.0 N3 A:DG18 4.0 38.0 1.0 C2' A:DC17 4.1 46.3 1.0 C5 A:DG18 4.1 34.7 1.0 C3 A:2ZY106 4.1 43.7 1.0 C4 A:DG18 4.2 36.6 1.0 C1' A:DC17 4.2 49.1 1.0 C6 A:DA11 4.2 37.3 1.0 O6 A:DG18 4.3 34.7 1.0 F7 A:2ZY106 4.8 41.1 1.0 K A:K102 4.8 58.3 1.0 C10 A:2ZY106 4.9 52.7 1.0 N1 A:DA11 4.9 35.6 1.0 O6 A:DG10 5.0 34.4 1.0

Fluorine binding site 2 out of 5 in the Structure of Lettuce C20T Bound to Dfhbi-1T


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Structure of Lettuce C20T Bound to Dfhbi-1T within 5.0Å range: probe atom residue distance (Å) B Occ A:F106 b:41.1 occ:1.00 F7 A:2ZY106 0.0 41.1 1.0 C4 A:2ZY106 1.4 41.7 1.0 C5 A:2ZY106 2.4 45.0 1.0 C3 A:2ZY106 2.4 43.7 1.0 O9 A:2ZY106 2.7 37.1 1.0 C6 A:DG26 3.0 51.7 1.0 C5 A:DG26 3.1 51.8 1.0 O6 A:DG26 3.1 49.9 1.0 N1 A:DG25 3.2 32.5 1.0 C2 A:DG25 3.2 32.4 1.0 N2 A:DG44 3.4 50.7 1.0 N2 A:DG25 3.4 33.4 1.0 N7 A:DG26 3.5 49.0 1.0 N1 A:DG26 3.6 54.6 1.0 C6 A:2ZY106 3.6 44.6 1.0 C2 A:2ZY106 3.7 48.0 1.0 O6 A:DG18 3.7 34.7 1.0 C4 A:DG26 3.8 54.1 1.0 C6 A:DG25 3.8 31.2 1.0 N3 A:DG25 3.9 32.5 1.0 K A:K102 4.1 58.3 1.0 C1 A:2ZY106 4.1 39.3 1.0 C8 A:DG26 4.2 53.3 1.0 C2 A:DG26 4.2 55.8 1.0 C4 A:DG25 4.3 31.9 1.0 N7 A:DG18 4.3 40.7 1.0 C6 A:DG18 4.3 36.4 1.0 C5 A:DG25 4.3 31.2 1.0 O6 A:DG25 4.4 31.2 1.0 N3 A:DG26 4.4 54.7 1.0 N9 A:DG26 4.4 58.6 1.0 C5 A:DG18 4.5 34.7 1.0 C2 A:DG44 4.6 44.4 1.0 F8 A:2ZY106 4.8 39.3 1.0 N12 A:2ZY106 4.8 48.0 1.0 N3 A:DC17 4.9 41.7 1.0 N1 A:DG44 4.9 44.6 1.0 C10 A:2ZY106 5.0 52.7 1.0 N4 A:DC17 5.0 41.5 1.0

Fluorine binding site 3 out of 5 in the Structure of Lettuce C20T Bound to Dfhbi-1T


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Structure of Lettuce C20T Bound to Dfhbi-1T within 5.0Å range: probe atom residue distance (Å) B Occ A:F106 b:77.6 occ:1.00 F20 A:2ZY106 0.0 77.6 1.0 C19 A:2ZY106 1.4 67.5 1.0 F22 A:2ZY106 2.2 60.2 1.0 F21 A:2ZY106 2.2 78.8 1.0 C16 A:2ZY106 2.4 73.1 1.0 N14 A:2ZY106 3.5 62.3 1.0 O4' A:DT20 3.8 47.5 1.0 C6 A:DT20 4.2 50.3 1.0 C13 A:2ZY106 4.4 49.0 1.0 C17 A:2ZY106 4.5 53.7 1.0 C15 A:2ZY106 4.5 55.6 1.0 C5 A:DT20 4.6 47.8 1.0 N1 A:DT20 4.7 49.9 1.0 O18 A:2ZY106 4.7 60.1 1.0 C5' A:DT20 4.7 55.2 1.0 C4' A:DT20 4.7 56.2 1.0 C7 A:DT20 4.8 48.0 1.0 C1' A:DT20 4.8 49.9 1.0

Fluorine binding site 4 out of 5 in the Structure of Lettuce C20T Bound to Dfhbi-1T


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Structure of Lettuce C20T Bound to Dfhbi-1T within 5.0Å range: probe atom residue distance (Å) B Occ A:F106 b:78.8 occ:1.00 F21 A:2ZY106 0.0 78.8 1.0 C19 A:2ZY106 1.4 67.5 1.0 F22 A:2ZY106 2.2 60.2 1.0 F20 A:2ZY106 2.2 77.6 1.0 C16 A:2ZY106 2.4 73.1 1.0 O18 A:2ZY106 3.0 60.1 1.0 N14 A:2ZY106 3.2 62.3 1.0 C15 A:2ZY106 3.4 55.6 1.0 C13 A:2ZY106 4.5 49.0 1.0 C11 A:2ZY106 4.8 49.6 1.0

Fluorine binding site 5 out of 5 in the Structure of Lettuce C20T Bound to Dfhbi-1T


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Structure of Lettuce C20T Bound to Dfhbi-1T within 5.0Å range: probe atom residue distance (Å) B Occ A:F106 b:60.2 occ:1.00 F22 A:2ZY106 0.0 60.2 1.0 C19 A:2ZY106 1.4 67.5 1.0 F21 A:2ZY106 2.2 78.8 1.0 F20 A:2ZY106 2.2 77.6 1.0 C16 A:2ZY106 2.4 73.1 1.0 N14 A:2ZY106 2.5 62.3 1.0 C15 A:2ZY106 3.1 55.6 1.0 C7 A:DT20 3.1 48.0 1.0 C13 A:2ZY106 3.2 49.0 1.0 O18 A:2ZY106 3.4 60.1 1.0 C5 A:DT20 3.6 47.8 1.0 C6 A:DT20 3.6 50.3 1.0 C17 A:2ZY106 3.9 53.7 1.0 C11 A:2ZY106 4.0 49.6 1.0 N12 A:2ZY106 4.1 48.0 1.0 O4' A:DG19 4.3 40.5 1.0 O4' A:DT20 4.5 47.5 1.0 N1 A:DT20 4.7 49.9 1.0 C4 A:DT20 4.7 47.4 1.0 C8 A:DG18 4.8 40.4 1.0 C4' A:DG19 4.8 42.9 1.0 C5' A:DT20 5.0 55.2 1.0

L.F.M.Passalacqua, A.R.Ferre-D'amare. Structure of Lettuce C20T Bound to Dfhbi-1T To Be Published.