Fluorine in PDB 8iqt: Crystal Structure of the Human Vitamin D Receptor Ligand Binding Domain Complexed with (23R)-F-25(Oh)D3

The structure of Crystal Structure of the Human Vitamin D Receptor Ligand Binding Domain Complexed with (23R)-F-25(Oh)D3, PDB code: 8iqt was solved by S.Kakuda, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.87 / 1.75
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	44.723, 51.363, 132.102, 90, 90, 90
R / Rfree (%)	18.2 / 20.7

The binding sites of Fluorine atom in the Crystal Structure of the Human Vitamin D Receptor Ligand Binding Domain Complexed with (23R)-F-25(Oh)D3 (pdb code 8iqt). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of the Human Vitamin D Receptor Ligand Binding Domain Complexed with (23R)-F-25(Oh)D3, PDB code: 8iqt:

Fluorine binding site 1 out of 1 in the Crystal Structure of the Human Vitamin D Receptor Ligand Binding Domain Complexed with (23R)-F-25(Oh)D3


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of the Human Vitamin D Receptor Ligand Binding Domain Complexed with (23R)-F-25(Oh)D3 within 5.0Å range: probe atom residue distance (Å) B Occ A:F501 b:27.8 occ:1.00 F1 A:SV0501 0.0 27.8 1.0 C18 A:SV0501 1.4 22.2 1.0 C19 A:SV0501 2.3 20.6 1.0 C17 A:SV0501 2.4 23.2 1.0 C21 A:SV0501 2.8 19.6 1.0 C15 A:SV0501 2.9 26.3 1.0 C16 A:SV0501 3.1 23.4 1.0 C13 A:SV0501 3.6 23.4 1.0 O12 A:SV0501 3.8 19.7 1.0 CD2 A:HIS305 3.9 24.3 1.0 NE2 A:HIS305 3.9 22.9 1.0 C23 A:SV0501 4.0 16.9 1.0 C24 A:SV0501 4.1 18.1 1.0 CB A:LEU230 4.3 19.8 1.0 C28 A:SV0501 4.4 17.3 1.0 C14 A:SV0501 4.4 26.4 1.0 CD1 A:LEU230 4.5 24.6 1.0 C27 A:SV0501 4.6 20.3 1.0 CG2 A:VAL234 4.7 20.0 1.0 CB A:ALA303 4.8 20.8 1.0 CG1 A:VAL300 4.8 26.7 1.0

S.Kakuda, S.Kakuda. N/A N/A.