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Fluorine in PDB 8jr0: Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587

Enzymatic activity of Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587

All present enzymatic activity of Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587:
7.1.2.2;

Other elements in 8jr0:

The structure of Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587 also contains other interesting chemical elements:

Bromine (Br) 7 atoms
Magnesium (Mg) 5 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587 (pdb code 8jr0). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 7 binding sites of Fluorine where determined in the Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587, PDB code: 8jr0:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6; 7;

Fluorine binding site 1 out of 7 in 8jr0

Go back to Fluorine Binding Sites List in 8jr0
Fluorine binding site 1 out of 7 in the Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587 within 5.0Å range:
probe atom residue distance (Å) B Occ
1:F600

b:72.4
occ:1.00
F26 1:UTI600 0.0 72.4 1.0
C19 1:UTI600 1.4 72.4 1.0
C20 1:UTI600 2.4 72.4 1.0
C18 1:UTI600 2.4 72.4 1.0
C25 1:UTI600 2.6 72.4 1.0
O24 1:UTI600 2.7 72.4 1.0
CG a:PRO170 2.7 113.5 1.0
C17 1:UTI600 2.8 72.4 1.0
CB a:PRO170 3.2 113.5 1.0
C27 1:UTI600 3.3 72.4 1.0
C21 1:UTI600 3.6 72.4 1.0
C23 1:UTI600 3.6 72.4 1.0
CD a:PRO170 3.7 113.5 1.0
C36 1:UTI600 3.9 72.4 1.0
C28 1:UTI600 4.0 72.4 1.0
C22 1:UTI600 4.1 72.4 1.0
O38 1:UTI600 4.2 72.4 1.0
C06 1:UTI600 4.3 72.4 1.0
CA a:PRO170 4.6 113.5 1.0
N a:PRO170 4.7 113.5 1.0
C07 1:UTI600 4.8 72.4 1.0
C35 1:UTI600 4.9 72.4 1.0
N29 1:UTI600 4.9 72.4 1.0
CD1 a:ILE171 5.0 110.8 1.0

Fluorine binding site 2 out of 7 in 8jr0

Go back to Fluorine Binding Sites List in 8jr0
Fluorine binding site 2 out of 7 in the Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587 within 5.0Å range:
probe atom residue distance (Å) B Occ
4:F600

b:66.2
occ:1.00
F26 4:UTI600 0.0 66.2 1.0
C19 4:UTI600 1.4 66.2 1.0
C18 4:UTI600 2.4 66.2 1.0
C20 4:UTI600 2.4 66.2 1.0
O24 4:UTI600 2.8 66.2 1.0
C17 4:UTI600 2.8 66.2 1.0
C25 4:UTI600 3.2 66.2 1.0
C08 4:UTI600 3.6 66.2 1.0
C23 4:UTI600 3.6 66.2 1.0
C21 4:UTI600 3.6 66.2 1.0
C27 4:UTI600 3.8 66.2 1.0
O38 4:UTI600 3.9 66.2 1.0
C07 4:UTI600 3.9 66.2 1.0
C06 4:UTI600 4.0 66.2 1.0
C22 4:UTI600 4.1 66.2 1.0
C28 4:UTI600 4.2 66.2 1.0
C09 4:UTI600 4.3 66.2 1.0
O15 4:UTI600 4.7 66.2 1.0
C05 4:UTI600 4.8 66.2 1.0
C36 4:UTI600 4.8 66.2 1.0
C12 4:UTI600 4.8 66.2 1.0

Fluorine binding site 3 out of 7 in 8jr0

Go back to Fluorine Binding Sites List in 8jr0
Fluorine binding site 3 out of 7 in the Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587 within 5.0Å range:
probe atom residue distance (Å) B Occ
5:F600

b:63.1
occ:1.00
F26 5:UTI600 0.0 63.1 1.0
C19 5:UTI600 1.4 63.1 1.0
C20 5:UTI600 2.4 63.1 1.0
C18 5:UTI600 2.4 63.1 1.0
O24 5:UTI600 2.8 63.1 1.0
C17 5:UTI600 2.8 63.1 1.0
C25 5:UTI600 3.2 63.1 1.0
C23 5:UTI600 3.6 63.1 1.0
C21 5:UTI600 3.6 63.1 1.0
C08 5:UTI600 3.7 63.1 1.0
C27 5:UTI600 3.8 63.1 1.0
O38 5:UTI600 3.8 63.1 1.0
C07 5:UTI600 4.0 63.1 1.0
C06 5:UTI600 4.0 63.1 1.0
C22 5:UTI600 4.1 63.1 1.0
C28 5:UTI600 4.2 63.1 1.0
C09 5:UTI600 4.5 63.1 1.0
C05 5:UTI600 4.7 63.1 1.0
C36 5:UTI600 4.8 63.1 1.0
O15 5:UTI600 4.9 63.1 1.0
C12 5:UTI600 4.9 63.1 1.0

Fluorine binding site 4 out of 7 in 8jr0

Go back to Fluorine Binding Sites List in 8jr0
Fluorine binding site 4 out of 7 in the Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587 within 5.0Å range:
probe atom residue distance (Å) B Occ
6:F600

b:68.7
occ:1.00
F26 6:UTI600 0.0 68.7 1.0
C19 6:UTI600 1.4 68.7 1.0
C20 6:UTI600 2.4 68.7 1.0
C18 6:UTI600 2.4 68.7 1.0
O24 6:UTI600 2.8 68.7 1.0
C17 6:UTI600 2.8 68.7 1.0
C08 6:UTI600 3.6 68.7 1.0
C25 6:UTI600 3.6 68.7 1.0
C23 6:UTI600 3.6 68.7 1.0
C21 6:UTI600 3.6 68.7 1.0
C27 6:UTI600 3.7 68.7 1.0
O38 6:UTI600 3.8 68.7 1.0
C07 6:UTI600 4.0 68.7 1.0
C06 6:UTI600 4.0 68.7 1.0
C22 6:UTI600 4.1 68.7 1.0
C28 6:UTI600 4.2 68.7 1.0
C09 6:UTI600 4.4 68.7 1.0
O15 6:UTI600 4.7 68.7 1.0
C36 6:UTI600 4.7 68.7 1.0
C12 6:UTI600 5.0 68.7 1.0
O40 6:UTI600 5.0 68.7 1.0
C39 6:UTI600 5.0 68.7 1.0
C05 6:UTI600 5.0 68.7 1.0

Fluorine binding site 5 out of 7 in 8jr0

Go back to Fluorine Binding Sites List in 8jr0
Fluorine binding site 5 out of 7 in the Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587 within 5.0Å range:
probe atom residue distance (Å) B Occ
7:F600

b:72.8
occ:1.00
F26 7:UTI600 0.0 72.8 1.0
C19 7:UTI600 1.4 72.8 1.0
C18 7:UTI600 2.4 72.8 1.0
C20 7:UTI600 2.4 72.8 1.0
O24 7:UTI600 2.8 72.8 1.0
C17 7:UTI600 2.8 72.8 1.0
C27 7:UTI600 3.6 72.8 1.0
C23 7:UTI600 3.6 72.8 1.0
C21 7:UTI600 3.6 72.8 1.0
C25 7:UTI600 3.8 72.8 1.0
O38 7:UTI600 3.9 72.8 1.0
C28 7:UTI600 4.0 72.8 1.0
C22 7:UTI600 4.1 72.8 1.0
C06 7:UTI600 4.2 72.8 1.0
C08 7:UTI600 4.2 72.8 1.0
C07 7:UTI600 4.4 72.8 1.0
C36 7:UTI600 4.5 72.8 1.0
C39 7:UTI600 4.8 72.8 1.0
C05 7:UTI600 5.0 72.8 1.0

Fluorine binding site 6 out of 7 in 8jr0

Go back to Fluorine Binding Sites List in 8jr0
Fluorine binding site 6 out of 7 in the Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587 within 5.0Å range:
probe atom residue distance (Å) B Occ
8:F600

b:66.4
occ:1.00
F26 8:UTI600 0.0 66.4 1.0
C19 8:UTI600 1.4 66.4 1.0
C20 8:UTI600 2.4 66.4 1.0
C18 8:UTI600 2.4 66.4 1.0
O24 8:UTI600 2.8 66.4 1.0
C17 8:UTI600 2.8 66.4 1.0
C27 8:UTI600 2.9 66.4 1.0
C28 8:UTI600 3.4 66.4 1.0
C25 8:UTI600 3.4 66.4 1.0
C36 8:UTI600 3.4 66.4 1.0
C23 8:UTI600 3.6 66.4 1.0
C21 8:UTI600 3.6 66.4 1.0
O38 8:UTI600 3.7 66.4 1.0
C22 8:UTI600 4.1 66.4 1.0
N29 8:UTI600 4.1 66.4 1.0
C35 8:UTI600 4.2 66.4 1.0
C06 8:UTI600 4.4 66.4 1.0
C30 8:UTI600 4.5 66.4 1.0
C39 8:UTI600 4.7 66.4 1.0

Fluorine binding site 7 out of 7 in 8jr0

Go back to Fluorine Binding Sites List in 8jr0
Fluorine binding site 7 out of 7 in the Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 7 of Cryo-Em Structure of Mycobacterium Tuberculosis Atp Synthase in Complex with Tbaj-587 within 5.0Å range:
probe atom residue distance (Å) B Occ
9:F600

b:72.8
occ:1.00
F26 9:UTI600 0.0 72.8 1.0
C19 9:UTI600 1.4 72.8 1.0
C20 9:UTI600 2.4 72.8 1.0
C18 9:UTI600 2.4 72.8 1.0
O24 9:UTI600 2.8 72.8 1.0
C17 9:UTI600 2.8 72.8 1.0
C27 9:UTI600 3.3 72.8 1.0
C25 9:UTI600 3.4 72.8 1.0
C21 9:UTI600 3.6 72.8 1.0
C23 9:UTI600 3.6 72.8 1.0
O38 9:UTI600 3.7 72.8 1.0
C28 9:UTI600 3.7 72.8 1.0
C22 9:UTI600 4.1 72.8 1.0
C36 9:UTI600 4.2 72.8 1.0
C06 9:UTI600 4.3 72.8 1.0
C39 9:UTI600 4.4 72.8 1.0
C08 9:UTI600 4.5 72.8 1.0
C07 9:UTI600 4.6 72.8 1.0
N29 9:UTI600 4.7 72.8 1.0

Reference:

Y.Zhang, Y.Lai, F.Liu, Z.Rao, H.Gong. Structure of Mycobacterium Tuberculosis Atp Synthase To Be Published.
Page generated: Fri Aug 2 21:00:20 2024

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