Fluorine in PDB 8jwg: Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq (pdb code 8jwg). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 6 binding sites of Fluorine where determined in the Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq, PDB code: 8jwg:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6;

Fluorine binding site 1 out of 6 in 8jwg

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Fluorine binding site 1 out of 6 in the Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1500

b:79.5
occ:1.00
FAE A:YMZ1500 0.0 79.5 1.0
CAZ A:YMZ1500 1.4 79.5 1.0
FAF A:YMZ1500 2.2 79.5 1.0
FAG A:YMZ1500 2.2 79.5 1.0
CAT A:YMZ1500 2.4 79.5 1.0
CAI A:YMZ1500 2.7 79.5 1.0
CG A:GLN1038 3.3 72.3 1.0
CAV A:YMZ1500 3.7 79.5 1.0
CB A:GLN1038 3.8 72.3 1.0
CAH A:YMZ1500 4.1 79.5 1.0
NAP A:YMZ1500 4.2 79.5 1.0
O A:SER1034 4.3 81.8 1.0
N A:GLN1038 4.5 72.3 1.0
O A:GLN1035 4.5 78.4 1.0
CD A:GLN1038 4.6 72.3 1.0
CA A:GLN1038 4.8 72.3 1.0
CAU A:YMZ1500 4.8 79.5 1.0
C A:GLN1035 4.9 78.4 1.0
CAJ A:YMZ1500 5.0 79.5 1.0
NE2 A:GLN1038 5.0 72.3 1.0

Fluorine binding site 2 out of 6 in 8jwg

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Fluorine binding site 2 out of 6 in the Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1500

b:79.5
occ:1.00
FAF A:YMZ1500 0.0 79.5 1.0
CAZ A:YMZ1500 1.4 79.5 1.0
FAG A:YMZ1500 2.2 79.5 1.0
FAE A:YMZ1500 2.2 79.5 1.0
CAT A:YMZ1500 2.4 79.5 1.0
NAP A:YMZ1500 2.9 79.5 1.0
CAV A:YMZ1500 3.0 79.5 1.0
CAI A:YMZ1500 3.4 79.5 1.0
CB A:GLN1038 3.5 72.3 1.0
CG A:GLN1038 3.6 72.3 1.0
CAR A:YMZ1500 4.1 79.5 1.0
FAD A:YMZ1500 4.2 79.5 1.0
CAU A:YMZ1500 4.3 79.5 1.0
CAH A:YMZ1500 4.6 79.5 1.0
CA A:GLN1038 4.7 72.3 1.0
CAY A:YMZ1500 4.8 79.5 1.0
N A:GLN1038 4.8 72.3 1.0
CAJ A:YMZ1500 4.9 79.5 1.0
O A:GLN1035 5.0 78.4 1.0

Fluorine binding site 3 out of 6 in 8jwg

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Fluorine binding site 3 out of 6 in the Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1500

b:79.5
occ:1.00
FAG A:YMZ1500 0.0 79.5 1.0
CAZ A:YMZ1500 1.4 79.5 1.0
FAF A:YMZ1500 2.2 79.5 1.0
FAE A:YMZ1500 2.2 79.5 1.0
CAT A:YMZ1500 2.4 79.5 1.0
NAP A:YMZ1500 2.9 79.5 1.0
CAV A:YMZ1500 3.0 79.5 1.0
CAI A:YMZ1500 3.4 79.5 1.0
CAR A:YMZ1500 4.1 79.5 1.0
FAD A:YMZ1500 4.2 79.5 1.0
CAU A:YMZ1500 4.3 79.5 1.0
O A:GLN1035 4.5 78.4 1.0
CAH A:YMZ1500 4.6 79.5 1.0
CAY A:YMZ1500 4.8 79.5 1.0
CAJ A:YMZ1500 4.9 79.5 1.0

Fluorine binding site 4 out of 6 in 8jwg

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Fluorine binding site 4 out of 6 in the Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1500

b:79.5
occ:1.00
FAC A:YMZ1500 0.0 79.5 1.0
CAY A:YMZ1500 1.4 79.5 1.0
FAB A:YMZ1500 2.2 79.5 1.0
FAD A:YMZ1500 2.2 79.5 1.0
CAR A:YMZ1500 2.4 79.5 1.0
CAK A:YMZ1500 3.0 79.5 1.0
NAP A:YMZ1500 3.4 79.5 1.0
CG2 A:ILE328 3.9 69.9 1.0
CE A:MET332 4.0 71.3 1.0
CD1 A:LEU71 4.2 64.8 1.0
CAS A:YMZ1500 4.2 79.5 1.0
CAV A:YMZ1500 4.6 79.5 1.0
CD1 A:ILE328 4.9 69.9 1.0
CAU A:YMZ1500 4.9 79.5 1.0

Fluorine binding site 5 out of 6 in 8jwg

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Fluorine binding site 5 out of 6 in the Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1500

b:79.5
occ:1.00
FAD A:YMZ1500 0.0 79.5 1.0
CAY A:YMZ1500 1.4 79.5 1.0
FAB A:YMZ1500 2.2 79.5 1.0
FAC A:YMZ1500 2.2 79.5 1.0
CAR A:YMZ1500 2.4 79.5 1.0
NAP A:YMZ1500 2.7 79.5 1.0
CAK A:YMZ1500 3.7 79.5 1.0
CD1 A:LEU71 3.7 64.8 1.0
CD2 A:LEU71 3.8 64.8 1.0
CAV A:YMZ1500 4.1 79.5 1.0
FAF A:YMZ1500 4.2 79.5 1.0
FAG A:YMZ1500 4.2 79.5 1.0
CG A:LEU71 4.3 64.8 1.0
CAZ A:YMZ1500 4.7 79.5 1.0
CAS A:YMZ1500 4.8 79.5 1.0
CAT A:YMZ1500 4.9 79.5 1.0
CAU A:YMZ1500 4.9 79.5 1.0

Fluorine binding site 6 out of 6 in 8jwg

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Fluorine binding site 6 out of 6 in the Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Cryo-Em Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Without H1 Helix in Complex with Mfq within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1500

b:79.5
occ:1.00
FAB A:YMZ1500 0.0 79.5 1.0
CAY A:YMZ1500 1.4 79.5 1.0
FAC A:YMZ1500 2.2 79.5 1.0
FAD A:YMZ1500 2.2 79.5 1.0
CAR A:YMZ1500 2.4 79.5 1.0
CAK A:YMZ1500 2.9 79.5 1.0
NAP A:YMZ1500 3.4 79.5 1.0
CD1 A:ILE328 3.9 69.9 1.0
CAS A:YMZ1500 4.2 79.5 1.0
CG2 A:ILE328 4.4 69.9 1.0
CD1 A:LEU71 4.5 64.8 1.0
CD2 A:LEU71 4.6 64.8 1.0
CAV A:YMZ1500 4.6 79.5 1.0
CG1 A:ILE328 4.7 69.9 1.0
CAU A:YMZ1500 4.9 79.5 1.0

Reference:

K.Si, X.He, L.Chen, A.Zhang, C.Guo, M.Li. The Structure of Plasmodium Falciparum Multidrug Resistance Protein 1 Reveals An N-Terminal Regulatory Domain. Proc.Natl.Acad.Sci.Usa V. 120 05120 2023.
ISSN: ESSN 1091-6490
PubMed: 37527341
DOI: 10.1073/PNAS.2219905120
Page generated: Fri Aug 2 21:03:55 2024

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