Fluorine in PDB 8k1l: Cryo-Em Structure of Na+,K+-Atpase ALPHA2 From Artemia Salina in Cation-Free E2P Form

The structure of Cryo-Em Structure of Na+,K+-Atpase ALPHA2 From Artemia Salina in Cation-Free E2P Form also contains other interesting chemical elements:

Aluminium

(Al)

1 atom

The binding sites of Fluorine atom in the Cryo-Em Structure of Na+,K+-Atpase ALPHA2 From Artemia Salina in Cation-Free E2P Form (pdb code 8k1l). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 4 binding sites of Fluorine where determined in the Cryo-Em Structure of Na+,K+-Atpase ALPHA2 From Artemia Salina in Cation-Free E2P Form, PDB code: 8k1l:
Jump to Fluorine binding site number: 1; 2; 3; 4;

Fluorine binding site 1 out of 4 in the Cryo-Em Structure of Na+,K+-Atpase ALPHA2 From Artemia Salina in Cation-Free E2P Form


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Cryo-Em Structure of Na+,K+-Atpase ALPHA2 From Artemia Salina in Cation-Free E2P Form within 5.0Å range: probe atom residue distance (Å) B Occ A:F1001 b:90.3 occ:1.00 F1 A:ALF1001 0.0 90.3 1.0 AL A:ALF1001 1.8 110.2 1.0 F4 A:ALF1001 2.5 101.6 1.0 F3 A:ALF1001 2.5 91.4 1.0 N A:GLY593 2.8 62.7 1.0 OD1 A:ASP353 2.8 77.6 1.0 OG1 A:THR592 3.2 80.1 1.0 CA A:THR592 3.3 60.3 1.0 C A:THR592 3.4 70.1 1.0 O A:THR196 3.5 84.9 1.0 F2 A:ALF1001 3.6 92.3 1.0 CG A:ASP353 3.6 72.5 1.0 CA A:GLY593 3.7 60.5 1.0 CB A:THR592 3.8 70.8 1.0 NZ A:LYS673 3.8 58.4 1.0 OD2 A:ASP353 3.9 54.4 1.0 ND2 A:ASN695 4.3 80.8 1.0 C A:THR196 4.4 82.7 1.0 O A:THR592 4.4 86.2 1.0 O A:VAL591 4.5 73.5 1.0 CE A:LYS673 4.5 61.0 1.0 C A:GLY593 4.6 62.3 1.0 OE2 A:GLU198 4.6 95.3 1.0 N A:THR592 4.6 56.3 1.0 N A:ASP594 4.7 77.6 1.0 N A:LYS354 4.7 61.7 1.0 CB A:ASP353 4.8 67.1 1.0 CA A:GLY197 4.9 89.5 1.0

Fluorine binding site 2 out of 4 in the Cryo-Em Structure of Na+,K+-Atpase ALPHA2 From Artemia Salina in Cation-Free E2P Form


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Cryo-Em Structure of Na+,K+-Atpase ALPHA2 From Artemia Salina in Cation-Free E2P Form within 5.0Å range: probe atom residue distance (Å) B Occ A:F1001 b:92.3 occ:1.00 F2 A:ALF1001 0.0 92.3 1.0 AL A:ALF1001 1.8 110.2 1.0 OD2 A:ASP353 2.1 54.4 1.0 F3 A:ALF1001 2.5 91.4 1.0 F4 A:ALF1001 2.5 101.6 1.0 OD1 A:ASP692 3.0 72.9 1.0 CG A:ASP353 3.0 72.5 1.0 O A:THR355 3.1 88.7 1.0 OD1 A:ASP353 3.2 77.6 1.0 CA A:GLY197 3.4 89.5 1.0 F1 A:ALF1001 3.6 90.3 1.0 ND2 A:ASN695 3.8 80.8 1.0 CG A:ASP692 3.9 80.6 1.0 OD2 A:ASP692 3.9 81.3 1.0 C A:GLY197 4.2 96.8 1.0 OD1 A:ASN695 4.2 83.9 1.0 C A:THR355 4.3 84.9 1.0 N A:GLY197 4.3 88.1 1.0 O A:THR196 4.4 84.9 1.0 O A:GLY197 4.4 98.8 1.0 CB A:ASP353 4.4 67.1 1.0 CG A:ASN695 4.5 81.8 1.0 OD2 A:ASP696 4.5 76.1 1.0 CB A:THR355 4.6 79.2 1.0 C A:THR196 4.7 82.7 1.0 N A:THR355 4.7 77.9 1.0 CA A:THR355 4.8 76.0 1.0 N A:GLY693 4.9 81.4 1.0 NZ A:LYS673 4.9 58.4 1.0

Fluorine binding site 3 out of 4 in the Cryo-Em Structure of Na+,K+-Atpase ALPHA2 From Artemia Salina in Cation-Free E2P Form


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Cryo-Em Structure of Na+,K+-Atpase ALPHA2 From Artemia Salina in Cation-Free E2P Form within 5.0Å range: probe atom residue distance (Å) B Occ A:F1001 b:91.4 occ:1.00 F3 A:ALF1001 0.0 91.4 1.0 AL A:ALF1001 1.8 110.2 1.0 OD1 A:ASP353 2.2 77.6 1.0 F1 A:ALF1001 2.5 90.3 1.0 F2 A:ALF1001 2.5 92.3 1.0 N A:THR355 2.9 77.9 1.0 CG A:ASP353 3.0 72.5 1.0 OD2 A:ASP353 3.1 54.4 1.0 CB A:THR355 3.2 79.2 1.0 O A:THR355 3.2 88.7 1.0 CA A:THR355 3.4 76.0 1.0 F4 A:ALF1001 3.6 101.6 1.0 C A:THR355 3.7 84.9 1.0 OG1 A:THR355 3.8 89.3 1.0 N A:LYS354 3.8 61.7 1.0 OE2 A:GLU198 3.9 95.3 1.0 C A:LYS354 3.9 72.7 1.0 OG1 A:THR592 4.0 80.1 1.0 O A:THR196 4.2 84.9 1.0 CA A:LYS354 4.3 65.9 1.0 CG2 A:THR355 4.4 79.6 1.0 CB A:ASP353 4.4 67.1 1.0 CA A:GLY197 4.5 89.5 1.0 CB A:LYS354 4.5 62.8 1.0 CD A:GLU198 4.6 96.2 1.0 C A:ASP353 4.6 62.8 1.0 C A:GLY197 4.7 96.8 1.0 CA A:ASP353 4.9 56.5 1.0 N A:GLY593 4.9 62.7 1.0 CB A:THR592 4.9 70.8 1.0 O A:LYS354 5.0 80.7 1.0 N A:GLY356 5.0 81.8 1.0 OD1 A:ASP692 5.0 72.9 1.0

Fluorine binding site 4 out of 4 in the Cryo-Em Structure of Na+,K+-Atpase ALPHA2 From Artemia Salina in Cation-Free E2P Form


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Cryo-Em Structure of Na+,K+-Atpase ALPHA2 From Artemia Salina in Cation-Free E2P Form within 5.0Å range: probe atom residue distance (Å) B Occ A:F1001 b:101.6 occ:1.00 F4 A:ALF1001 0.0 101.6 1.0 AL A:ALF1001 1.8 110.2 1.0 ND2 A:ASN695 2.2 80.8 1.0 F1 A:ALF1001 2.5 90.3 1.0 F2 A:ALF1001 2.5 92.3 1.0 NZ A:LYS673 2.8 58.4 1.0 CG A:ASN695 3.0 81.8 1.0 OD2 A:ASP353 3.2 54.4 1.0 OD1 A:ASN695 3.3 83.9 1.0 F3 A:ALF1001 3.6 91.4 1.0 CG A:ASP353 3.6 72.5 1.0 OD1 A:ASP353 3.7 77.6 1.0 O A:THR196 3.7 84.9 1.0 CA A:GLY197 3.9 89.5 1.0 C A:THR196 4.0 82.7 1.0 CE A:LYS673 4.0 61.0 1.0 N A:GLY197 4.0 88.1 1.0 CB A:ASN695 4.2 76.6 1.0 OD2 A:ASP696 4.4 76.1 1.0 CA A:THR196 4.8 82.2 1.0 CB A:ASP353 4.8 67.1 1.0 OD1 A:ASP692 4.9 72.9 1.0 N A:GLY593 4.9 62.7 1.0

P.Artigas, D.J.Meyer, V.C.Young, K.Spontarelli, J.Eastman, E.Strandquist, H.Rui, B.Roux, M.A.Birk, H.Nakanishi, K.Abe, C.Gatto. A Na Pump with Reduced Stoichiometry Is Upregulated By Brine Shrimp in Extreme Salinities. To Be Published.