Fluorine in PDB 8pgx: Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 3461

The structure of Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 3461, PDB code: 8pgx was solved by K.Calvopina, J.Brem, A.J.M.Farley, M.D.Allen, C.J.Schofield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.27 / 1.20
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	39.38, 67.99, 40.35, 90, 93.67, 90
R / Rfree (%)	12.5 / 13.9

The structure of Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 3461 also contains other interesting chemical elements:

Zinc

(Zn)

2 atoms

The binding sites of Fluorine atom in the Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 3461 (pdb code 8pgx). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 3461, PDB code: 8pgx:

Fluorine binding site 1 out of 1 in the Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 3461


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 3461 within 5.0Å range: probe atom residue distance (Å) B Occ A:F303 b:21.0 occ:1.00 F15 A:YKO303 0.0 21.0 1.0 C14 A:YKO303 1.4 17.8 1.0 C16 A:YKO303 2.3 15.2 1.0 C12 A:YKO303 2.4 17.4 1.0 H161 A:YKO303 2.6 18.2 1.0 O13 A:YKO303 2.8 19.8 1.0 O A:HOH416 2.9 10.2 0.5 O A:HOH463 3.0 17.4 0.6 HB2 A:HIS240 3.2 13.3 1.0 O A:HOH642 3.2 15.8 0.6 O A:HOH434 3.3 30.1 0.7 N11 A:YKO303 3.6 17.1 1.0 HB3 A:HIS240 3.6 13.3 1.0 C09 A:YKO303 3.6 13.7 1.0 O A:HOH624 3.7 29.5 0.9 CB A:HIS240 3.8 11.1 1.0 O A:HOH500 3.9 12.1 0.9 C10 A:YKO303 4.1 15.2 1.0 HE1 A:HIS201 4.1 21.4 0.5 HA2 A:GLY209 4.3 22.9 1.0 CG A:HIS240 4.3 10.9 1.0 H111 A:YKO303 4.4 20.4 1.0 HA3 A:GLY209 4.5 22.9 1.0 ND1 A:HIS201 4.6 17.2 0.5 CE1 A:HIS201 4.7 17.9 0.5 HD1 A:TYR67 4.7 15.5 1.0 CD2 A:HIS240 4.8 10.8 1.0 O20 A:YKO303 4.8 14.1 1.0 HD2 A:HIS240 4.8 12.9 1.0 C08 A:YKO303 4.8 11.8 1.0 CA A:GLY209 4.8 19.1 1.0 O A:HIS240 5.0 10.6 1.0

K.Calvopina, J.Brem, A.J.M.Farley, M.D.Allen, C.J.Schofield. Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 3461 To Be Published.