Fluorine in PDB 8qdn: NMR2 Structure of Kras G12V (Gmppnp Bound) in Complex WITH7-Fluoro-N, N-Dimethyl-1-Benzofuran-2-Carboxamide

Fluorine Binding Sites:

The binding sites of Fluorine atom in the NMR2 Structure of Kras G12V (Gmppnp Bound) in Complex WITH7-Fluoro-N, N-Dimethyl-1-Benzofuran-2-Carboxamide (pdb code 8qdn). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the NMR2 Structure of Kras G12V (Gmppnp Bound) in Complex WITH7-Fluoro-N, N-Dimethyl-1-Benzofuran-2-Carboxamide, PDB code: 8qdn:

Fluorine binding site 1 out of 1 in 8qdn

Go back to Fluorine Binding Sites List in 8qdn
Fluorine binding site 1 out of 1 in the NMR2 Structure of Kras G12V (Gmppnp Bound) in Complex WITH7-Fluoro-N, N-Dimethyl-1-Benzofuran-2-Carboxamide


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of NMR2 Structure of Kras G12V (Gmppnp Bound) in Complex WITH7-Fluoro-N, N-Dimethyl-1-Benzofuran-2-Carboxamide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F500

b:0.0
occ:1.00
F A:R60500 0.0 0.0 1.0
C10 A:R60500 1.3 0.0 1.0
C9 A:R60500 2.4 0.0 1.0
C11 A:R60500 2.4 0.0 1.0
H1 A:R60500 2.6 0.0 1.0
HB3 A:LYS5 2.7 0.0 1.0
O A:R60500 3.0 0.0 1.0
HB3 A:LEU56 3.0 0.0 1.0
HA A:LYS5 3.2 0.0 1.0
H A:LEU6 3.2 0.0 1.0
N A:LEU6 3.3 0.0 1.0
O A:LEU6 3.3 0.0 1.0
HB A:VAL7 3.3 0.0 1.0
C A:LYS5 3.4 0.0 1.0
C A:LEU6 3.4 0.0 1.0
O A:ASP54 3.5 0.0 1.0
H A:LEU56 3.5 0.0 1.0
CB A:LYS5 3.5 0.0 1.0
CA A:LYS5 3.5 0.0 1.0
HB2 A:LEU56 3.6 0.0 1.0
C8 A:R60500 3.6 0.0 1.0
HG12 A:VAL7 3.6 0.0 1.0
C6 A:R60500 3.6 0.0 1.0
H52 A:R60500 3.7 0.0 1.0
HD2 A:LYS5 3.7 0.0 1.0
HA2 A:GLY75 3.8 0.0 1.0
CB A:LEU56 3.8 0.0 1.0
HD3 A:LYS5 3.8 0.0 1.0
HA A:ILE55 3.9 0.0 1.0
N A:VAL7 3.9 0.0 1.0
CA A:LEU6 3.9 0.0 1.0
N A:LEU56 4.0 0.0 1.0
O A:LYS5 4.0 0.0 1.0
HA A:VAL7 4.1 0.0 1.0
H53 A:R60500 4.1 0.0 1.0
CB A:VAL7 4.1 0.0 1.0
C7 A:R60500 4.1 0.0 1.0
CD A:LYS5 4.2 0.0 1.0
HD23 A:LEU56 4.2 0.0 1.0
HB2 A:LYS5 4.3 0.0 1.0
C4 A:R60500 4.3 0.0 1.0
CA A:VAL7 4.3 0.0 1.0
CG1 A:VAL7 4.4 0.0 1.0
C A:R60500 4.4 0.0 1.0
CG A:LYS5 4.4 0.0 1.0
H A:VAL7 4.5 0.0 1.0
HA A:LEU6 4.5 0.0 1.0
CA A:LEU56 4.5 0.0 1.0
H2 A:R60500 4.5 0.0 1.0
C5 A:R60500 4.6 0.0 1.0
C A:ASP54 4.6 0.0 1.0
C A:ILE55 4.6 0.0 1.0
H A:GLU76 4.6 0.0 1.0
HD22 A:LEU56 4.7 0.0 1.0
CA A:ILE55 4.7 0.0 1.0
OD2 A:ASP54 4.7 0.0 1.0
CA A:GLY75 4.8 0.0 1.0
CD2 A:LEU56 4.8 0.0 1.0
HG13 A:VAL7 4.9 0.0 1.0
HA3 A:GLY75 4.9 0.0 1.0
HG3 A:LYS5 4.9 0.0 1.0
CG A:LEU56 4.9 0.0 1.0
N A:LYS5 5.0 0.0 1.0
HB3 A:ASP54 5.0 0.0 1.0
H51 A:R60500 5.0 0.0 1.0

Reference:

M.Buetikofer, J.Orts. NMR2 Structure of Kras G12V (Gmppnp Bound) in Complex with 5-(1H-Indol-2-L)Piperazin-2-One To Be Published.
Page generated: Thu Oct 31 19:54:40 2024

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