Fluorine in PDB 8qxs: Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation
Enzymatic activity of Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation
All present enzymatic activity of Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation:
5.6.1.7;
Other elements in 8qxs:
The structure of Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation also contains other interesting chemical elements:
Fluorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
21;
Binding sites:
The binding sites of Fluorine atom in the Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation
(pdb code 8qxs). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 21 binding sites of Fluorine where determined in the
Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation, PDB code: 8qxs:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Fluorine binding site 1 out
of 21 in 8qxs
Go back to
Fluorine Binding Sites List in 8qxs
Fluorine binding site 1 out
of 21 in the Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1602
b:22.2
occ:1.00
|
F1
|
A:BEF1602
|
0.0
|
22.2
|
1.0
|
BE
|
A:BEF1602
|
1.5
|
22.2
|
1.0
|
O1B
|
A:ADP1600
|
2.2
|
20.5
|
1.0
|
MG
|
A:MG1601
|
2.3
|
23.8
|
1.0
|
O3B
|
A:ADP1600
|
2.5
|
20.5
|
1.0
|
F2
|
A:BEF1602
|
2.5
|
22.2
|
1.0
|
F3
|
A:BEF1602
|
2.5
|
22.2
|
1.0
|
PB
|
A:ADP1600
|
2.7
|
20.5
|
1.0
|
OD1
|
A:ASP87
|
2.8
|
26.3
|
1.0
|
O
|
A:HOH1702
|
2.9
|
32.5
|
1.0
|
O3A
|
A:ADP1600
|
3.1
|
20.5
|
1.0
|
O2A
|
A:ADP1600
|
3.4
|
20.5
|
1.0
|
O
|
A:HOH1701
|
3.6
|
23.3
|
1.0
|
OD2
|
A:ASP398
|
3.7
|
35.7
|
1.0
|
PA
|
A:ADP1600
|
3.9
|
20.5
|
1.0
|
CG
|
A:ASP87
|
3.9
|
26.3
|
1.0
|
O2B
|
A:ADP1600
|
4.1
|
20.5
|
1.0
|
K
|
A:K1603
|
4.2
|
28.2
|
1.0
|
OD1
|
A:ASP52
|
4.3
|
22.1
|
1.0
|
N
|
A:GLY88
|
4.3
|
21.0
|
1.0
|
CG
|
A:ASP398
|
4.4
|
35.7
|
1.0
|
OD2
|
A:ASP87
|
4.5
|
26.3
|
1.0
|
O1A
|
A:ADP1600
|
4.9
|
20.5
|
1.0
|
OD1
|
A:ASP398
|
4.9
|
35.7
|
1.0
|
CA
|
A:ASP87
|
4.9
|
26.3
|
1.0
|
|
Fluorine binding site 2 out
of 21 in 8qxs
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Fluorine Binding Sites List in 8qxs
Fluorine binding site 2 out
of 21 in the Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1602
b:22.2
occ:1.00
|
F2
|
A:BEF1602
|
0.0
|
22.2
|
1.0
|
BE
|
A:BEF1602
|
1.5
|
22.2
|
1.0
|
F3
|
A:BEF1602
|
2.5
|
22.2
|
1.0
|
F1
|
A:BEF1602
|
2.5
|
22.2
|
1.0
|
O3B
|
A:ADP1600
|
2.7
|
20.5
|
1.0
|
OD1
|
A:ASP52
|
3.0
|
22.1
|
1.0
|
OG1
|
A:THR89
|
3.2
|
18.9
|
1.0
|
CG
|
A:ASP52
|
3.8
|
22.1
|
1.0
|
OD1
|
A:ASP87
|
3.9
|
26.3
|
1.0
|
N
|
A:GLY53
|
3.9
|
20.3
|
1.0
|
PB
|
A:ADP1600
|
3.9
|
20.5
|
1.0
|
OD2
|
A:ASP398
|
4.0
|
35.7
|
1.0
|
N
|
A:THR89
|
4.1
|
18.9
|
1.0
|
CG2
|
A:THR89
|
4.1
|
18.9
|
1.0
|
O1B
|
A:ADP1600
|
4.2
|
20.5
|
1.0
|
CB
|
A:THR89
|
4.2
|
18.9
|
1.0
|
N
|
A:GLY88
|
4.3
|
21.0
|
1.0
|
OD2
|
A:ASP52
|
4.4
|
22.1
|
1.0
|
MG
|
A:MG1601
|
4.5
|
23.8
|
1.0
|
O3A
|
A:ADP1600
|
4.5
|
20.5
|
1.0
|
CA
|
A:ASP52
|
4.6
|
22.1
|
1.0
|
CG
|
A:ASP398
|
4.6
|
35.7
|
1.0
|
OD1
|
A:ASP398
|
4.7
|
35.7
|
1.0
|
OG1
|
A:THR90
|
4.7
|
17.7
|
1.0
|
CA
|
A:ASP87
|
4.7
|
26.3
|
1.0
|
K
|
A:K1603
|
4.7
|
28.2
|
1.0
|
CA
|
A:THR89
|
4.7
|
18.9
|
1.0
|
CA
|
A:GLY53
|
4.7
|
20.3
|
1.0
|
C
|
A:ASP52
|
4.7
|
22.1
|
1.0
|
CB
|
A:ASP52
|
4.8
|
22.1
|
1.0
|
N
|
A:THR90
|
4.9
|
17.7
|
1.0
|
C
|
A:ASP87
|
4.9
|
26.3
|
1.0
|
|
Fluorine binding site 3 out
of 21 in 8qxs
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Fluorine Binding Sites List in 8qxs
Fluorine binding site 3 out
of 21 in the Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1602
b:22.2
occ:1.00
|
F3
|
A:BEF1602
|
0.0
|
22.2
|
1.0
|
BE
|
A:BEF1602
|
1.5
|
22.2
|
1.0
|
O3B
|
A:ADP1600
|
1.6
|
20.5
|
1.0
|
O3A
|
A:ADP1600
|
2.4
|
20.5
|
1.0
|
PB
|
A:ADP1600
|
2.5
|
20.5
|
1.0
|
F2
|
A:BEF1602
|
2.5
|
22.2
|
1.0
|
F1
|
A:BEF1602
|
2.5
|
22.2
|
1.0
|
OG1
|
A:THR90
|
2.8
|
17.7
|
1.0
|
K
|
A:K1603
|
2.8
|
28.2
|
1.0
|
O1B
|
A:ADP1600
|
3.3
|
20.5
|
1.0
|
O2B
|
A:ADP1600
|
3.7
|
20.5
|
1.0
|
CB
|
A:THR90
|
3.7
|
17.7
|
1.0
|
OG1
|
A:THR89
|
3.7
|
18.9
|
1.0
|
PA
|
A:ADP1600
|
3.8
|
20.5
|
1.0
|
N
|
A:THR90
|
3.8
|
17.7
|
1.0
|
N
|
A:GLY53
|
4.0
|
20.3
|
1.0
|
O1A
|
A:ADP1600
|
4.3
|
20.5
|
1.0
|
O2A
|
A:ADP1600
|
4.3
|
20.5
|
1.0
|
N
|
A:THR89
|
4.3
|
18.9
|
1.0
|
CA
|
A:THR90
|
4.4
|
17.7
|
1.0
|
CA
|
A:GLY53
|
4.6
|
20.3
|
1.0
|
MG
|
A:MG1601
|
4.6
|
23.8
|
1.0
|
OD1
|
A:ASP52
|
4.6
|
22.1
|
1.0
|
O
|
A:LYS51
|
4.7
|
20.2
|
1.0
|
C
|
A:THR89
|
4.8
|
18.9
|
1.0
|
N
|
A:GLY88
|
4.8
|
21.0
|
1.0
|
O5'
|
A:ADP1600
|
4.9
|
20.5
|
1.0
|
CB
|
A:THR89
|
4.9
|
18.9
|
1.0
|
CA
|
A:THR89
|
4.9
|
18.9
|
1.0
|
CG2
|
A:THR90
|
4.9
|
17.7
|
1.0
|
OD1
|
A:ASP87
|
4.9
|
26.3
|
1.0
|
C
|
A:ASP52
|
5.0
|
22.1
|
1.0
|
|
Fluorine binding site 4 out
of 21 in 8qxs
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Fluorine Binding Sites List in 8qxs
Fluorine binding site 4 out
of 21 in the Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F1602
b:30.8
occ:1.00
|
F1
|
B:BEF1602
|
0.0
|
30.8
|
1.0
|
BE
|
B:BEF1602
|
1.5
|
30.8
|
1.0
|
MG
|
B:MG1601
|
2.0
|
27.6
|
1.0
|
O1B
|
B:ADP1600
|
2.2
|
60.2
|
1.0
|
O3B
|
B:ADP1600
|
2.4
|
60.2
|
1.0
|
F2
|
B:BEF1602
|
2.5
|
30.8
|
1.0
|
F3
|
B:BEF1602
|
2.5
|
30.8
|
1.0
|
PB
|
B:ADP1600
|
2.6
|
60.2
|
1.0
|
O3A
|
B:ADP1600
|
3.0
|
60.2
|
1.0
|
O
|
B:HOH1702
|
3.1
|
36.9
|
1.0
|
O2A
|
B:ADP1600
|
3.2
|
60.2
|
1.0
|
OD1
|
B:ASP87
|
3.3
|
30.8
|
1.0
|
O
|
B:HOH1701
|
3.5
|
27.3
|
1.0
|
PA
|
B:ADP1600
|
3.7
|
60.2
|
1.0
|
K
|
B:K1603
|
4.1
|
29.8
|
1.0
|
O2B
|
B:ADP1600
|
4.1
|
60.2
|
1.0
|
CG
|
B:ASP87
|
4.2
|
30.8
|
1.0
|
N
|
B:GLY88
|
4.2
|
25.8
|
1.0
|
OD1
|
B:ASP52
|
4.4
|
24.2
|
1.0
|
OD2
|
B:ASP398
|
4.5
|
37.9
|
1.0
|
O1A
|
B:ADP1600
|
4.7
|
60.2
|
1.0
|
OD2
|
B:ASP87
|
4.7
|
30.8
|
1.0
|
CG
|
B:ASP398
|
4.8
|
37.9
|
1.0
|
O5'
|
B:ADP1600
|
4.9
|
60.2
|
1.0
|
CA
|
B:ASP87
|
5.0
|
30.8
|
1.0
|
CA
|
B:GLY88
|
5.0
|
25.8
|
1.0
|
|
Fluorine binding site 5 out
of 21 in 8qxs
Go back to
Fluorine Binding Sites List in 8qxs
Fluorine binding site 5 out
of 21 in the Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F1602
b:30.8
occ:1.00
|
F2
|
B:BEF1602
|
0.0
|
30.8
|
1.0
|
BE
|
B:BEF1602
|
1.5
|
30.8
|
1.0
|
F3
|
B:BEF1602
|
2.5
|
30.8
|
1.0
|
F1
|
B:BEF1602
|
2.5
|
30.8
|
1.0
|
O3B
|
B:ADP1600
|
2.8
|
60.2
|
1.0
|
OD1
|
B:ASP52
|
2.9
|
24.2
|
1.0
|
OG1
|
B:THR89
|
3.2
|
24.4
|
1.0
|
CG
|
B:ASP52
|
3.5
|
24.2
|
1.0
|
N
|
B:GLY53
|
3.8
|
22.5
|
1.0
|
OD2
|
B:ASP52
|
3.9
|
24.2
|
1.0
|
PB
|
B:ADP1600
|
4.0
|
60.2
|
1.0
|
N
|
B:THR89
|
4.2
|
24.4
|
1.0
|
MG
|
B:MG1601
|
4.2
|
27.6
|
1.0
|
O1B
|
B:ADP1600
|
4.2
|
60.2
|
1.0
|
CA
|
B:ASP52
|
4.3
|
24.2
|
1.0
|
CB
|
B:THR89
|
4.3
|
24.4
|
1.0
|
CG2
|
B:THR89
|
4.3
|
24.4
|
1.0
|
N
|
B:GLY88
|
4.4
|
25.8
|
1.0
|
O3A
|
B:ADP1600
|
4.5
|
60.2
|
1.0
|
OD2
|
B:ASP398
|
4.5
|
37.9
|
1.0
|
CB
|
B:ASP52
|
4.5
|
24.2
|
1.0
|
C
|
B:ASP52
|
4.5
|
24.2
|
1.0
|
K
|
B:K1603
|
4.6
|
29.8
|
1.0
|
OG1
|
B:THR90
|
4.6
|
25.6
|
1.0
|
OD1
|
B:ASP87
|
4.6
|
30.8
|
1.0
|
CA
|
B:GLY53
|
4.7
|
22.5
|
1.0
|
OD1
|
B:ASP398
|
4.8
|
37.9
|
1.0
|
CA
|
B:THR89
|
4.8
|
24.4
|
1.0
|
CA
|
B:ASP87
|
4.8
|
30.8
|
1.0
|
CG
|
B:ASP398
|
4.8
|
37.9
|
1.0
|
N
|
B:THR90
|
4.9
|
25.6
|
1.0
|
|
Fluorine binding site 6 out
of 21 in 8qxs
Go back to
Fluorine Binding Sites List in 8qxs
Fluorine binding site 6 out
of 21 in the Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F1602
b:30.8
occ:1.00
|
F3
|
B:BEF1602
|
0.0
|
30.8
|
1.0
|
BE
|
B:BEF1602
|
1.5
|
30.8
|
1.0
|
O3B
|
B:ADP1600
|
1.5
|
60.2
|
1.0
|
O3A
|
B:ADP1600
|
2.3
|
60.2
|
1.0
|
PB
|
B:ADP1600
|
2.4
|
60.2
|
1.0
|
F2
|
B:BEF1602
|
2.5
|
30.8
|
1.0
|
F1
|
B:BEF1602
|
2.5
|
30.8
|
1.0
|
OG1
|
B:THR90
|
2.6
|
25.6
|
1.0
|
K
|
B:K1603
|
2.8
|
29.8
|
1.0
|
O1B
|
B:ADP1600
|
3.4
|
60.2
|
1.0
|
O2B
|
B:ADP1600
|
3.6
|
60.2
|
1.0
|
CB
|
B:THR90
|
3.6
|
25.6
|
1.0
|
OG1
|
B:THR89
|
3.7
|
24.4
|
1.0
|
N
|
B:THR90
|
3.7
|
25.6
|
1.0
|
PA
|
B:ADP1600
|
3.7
|
60.2
|
1.0
|
N
|
B:GLY53
|
3.9
|
22.5
|
1.0
|
N
|
B:THR89
|
4.2
|
24.4
|
1.0
|
O1A
|
B:ADP1600
|
4.2
|
60.2
|
1.0
|
O2A
|
B:ADP1600
|
4.3
|
60.2
|
1.0
|
CA
|
B:THR90
|
4.3
|
25.6
|
1.0
|
MG
|
B:MG1601
|
4.3
|
27.6
|
1.0
|
CA
|
B:GLY53
|
4.5
|
22.5
|
1.0
|
C
|
B:THR89
|
4.7
|
24.4
|
1.0
|
O
|
B:LYS51
|
4.7
|
22.0
|
1.0
|
N
|
B:GLY88
|
4.8
|
25.8
|
1.0
|
CA
|
B:THR89
|
4.8
|
24.4
|
1.0
|
CB
|
B:THR89
|
4.8
|
24.4
|
1.0
|
O5'
|
B:ADP1600
|
4.8
|
60.2
|
1.0
|
CG2
|
B:THR90
|
4.8
|
25.6
|
1.0
|
OD1
|
B:ASP52
|
4.8
|
24.2
|
1.0
|
C
|
B:GLY88
|
4.9
|
25.8
|
1.0
|
C
|
B:ASP52
|
4.9
|
24.2
|
1.0
|
CA
|
B:GLY88
|
4.9
|
25.8
|
1.0
|
CA
|
B:ASP52
|
4.9
|
24.2
|
1.0
|
|
Fluorine binding site 7 out
of 21 in 8qxs
Go back to
Fluorine Binding Sites List in 8qxs
Fluorine binding site 7 out
of 21 in the Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F1602
b:24.7
occ:1.00
|
F1
|
C:BEF1602
|
0.0
|
24.7
|
1.0
|
BE
|
C:BEF1602
|
1.5
|
24.7
|
1.0
|
MG
|
C:MG1601
|
2.1
|
25.8
|
1.0
|
O1B
|
C:ADP1600
|
2.2
|
22.8
|
1.0
|
O3B
|
C:ADP1600
|
2.5
|
22.8
|
1.0
|
F2
|
C:BEF1602
|
2.5
|
24.7
|
1.0
|
F3
|
C:BEF1602
|
2.5
|
24.7
|
1.0
|
PB
|
C:ADP1600
|
2.7
|
22.8
|
1.0
|
O
|
C:HOH1702
|
2.8
|
31.8
|
1.0
|
OD1
|
C:ASP87
|
2.8
|
29.2
|
1.0
|
O3A
|
C:ADP1600
|
3.2
|
22.8
|
1.0
|
O
|
C:HOH1701
|
3.4
|
25.6
|
1.0
|
O2A
|
C:ADP1600
|
3.4
|
22.8
|
1.0
|
CG
|
C:ASP87
|
3.9
|
29.2
|
1.0
|
PA
|
C:ADP1600
|
3.9
|
22.8
|
1.0
|
O2B
|
C:ADP1600
|
4.1
|
22.8
|
1.0
|
N
|
C:GLY88
|
4.2
|
24.6
|
1.0
|
K
|
C:K1603
|
4.2
|
28.8
|
1.0
|
OD1
|
C:ASP52
|
4.3
|
23.0
|
1.0
|
OD2
|
C:ASP398
|
4.5
|
37.0
|
1.0
|
OD2
|
C:ASP87
|
4.5
|
29.2
|
1.0
|
CG
|
C:ASP398
|
4.8
|
37.0
|
1.0
|
CA
|
C:ASP87
|
4.9
|
29.2
|
1.0
|
CA
|
C:GLY88
|
4.9
|
24.6
|
1.0
|
O1A
|
C:ADP1600
|
5.0
|
22.8
|
1.0
|
|
Fluorine binding site 8 out
of 21 in 8qxs
Go back to
Fluorine Binding Sites List in 8qxs
Fluorine binding site 8 out
of 21 in the Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F1602
b:24.7
occ:1.00
|
F2
|
C:BEF1602
|
0.0
|
24.7
|
1.0
|
BE
|
C:BEF1602
|
1.5
|
24.7
|
1.0
|
F3
|
C:BEF1602
|
2.5
|
24.7
|
1.0
|
F1
|
C:BEF1602
|
2.5
|
24.7
|
1.0
|
O3B
|
C:ADP1600
|
2.7
|
22.8
|
1.0
|
OD1
|
C:ASP52
|
2.9
|
23.0
|
1.0
|
OG1
|
C:THR89
|
3.3
|
23.7
|
1.0
|
CG
|
C:ASP52
|
3.8
|
23.0
|
1.0
|
N
|
C:GLY53
|
3.9
|
21.4
|
1.0
|
PB
|
C:ADP1600
|
4.0
|
22.8
|
1.0
|
OD1
|
C:ASP87
|
4.0
|
29.2
|
1.0
|
N
|
C:THR89
|
4.1
|
23.7
|
1.0
|
N
|
C:GLY88
|
4.2
|
24.6
|
1.0
|
O1B
|
C:ADP1600
|
4.2
|
22.8
|
1.0
|
OD2
|
C:ASP52
|
4.3
|
23.0
|
1.0
|
MG
|
C:MG1601
|
4.3
|
25.8
|
1.0
|
CB
|
C:THR89
|
4.4
|
23.7
|
1.0
|
CG2
|
C:THR89
|
4.4
|
23.7
|
1.0
|
OD2
|
C:ASP398
|
4.5
|
37.0
|
1.0
|
CA
|
C:ASP52
|
4.5
|
23.0
|
1.0
|
O3A
|
C:ADP1600
|
4.6
|
22.8
|
1.0
|
OG1
|
C:THR90
|
4.7
|
25.1
|
1.0
|
K
|
C:K1603
|
4.7
|
28.8
|
1.0
|
CA
|
C:ASP87
|
4.7
|
29.2
|
1.0
|
C
|
C:ASP52
|
4.8
|
23.0
|
1.0
|
CB
|
C:ASP52
|
4.8
|
23.0
|
1.0
|
CA
|
C:GLY53
|
4.8
|
21.4
|
1.0
|
CA
|
C:THR89
|
4.8
|
23.7
|
1.0
|
CG
|
C:ASP398
|
4.9
|
37.0
|
1.0
|
OD1
|
C:ASP398
|
4.9
|
37.0
|
1.0
|
C
|
C:ASP87
|
4.9
|
29.2
|
1.0
|
N
|
C:THR90
|
4.9
|
25.1
|
1.0
|
|
Fluorine binding site 9 out
of 21 in 8qxs
Go back to
Fluorine Binding Sites List in 8qxs
Fluorine binding site 9 out
of 21 in the Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F1602
b:24.7
occ:1.00
|
F3
|
C:BEF1602
|
0.0
|
24.7
|
1.0
|
BE
|
C:BEF1602
|
1.5
|
24.7
|
1.0
|
O3B
|
C:ADP1600
|
1.6
|
22.8
|
1.0
|
O3A
|
C:ADP1600
|
2.4
|
22.8
|
1.0
|
PB
|
C:ADP1600
|
2.5
|
22.8
|
1.0
|
F2
|
C:BEF1602
|
2.5
|
24.7
|
1.0
|
F1
|
C:BEF1602
|
2.5
|
24.7
|
1.0
|
K
|
C:K1603
|
2.8
|
28.8
|
1.0
|
OG1
|
C:THR90
|
2.8
|
25.1
|
1.0
|
O1B
|
C:ADP1600
|
3.3
|
22.8
|
1.0
|
O2B
|
C:ADP1600
|
3.7
|
22.8
|
1.0
|
PA
|
C:ADP1600
|
3.7
|
22.8
|
1.0
|
CB
|
C:THR90
|
3.7
|
25.1
|
1.0
|
N
|
C:THR90
|
3.9
|
25.1
|
1.0
|
OG1
|
C:THR89
|
3.9
|
23.7
|
1.0
|
N
|
C:GLY53
|
4.0
|
21.4
|
1.0
|
O2A
|
C:ADP1600
|
4.2
|
22.8
|
1.0
|
O1A
|
C:ADP1600
|
4.3
|
22.8
|
1.0
|
N
|
C:THR89
|
4.4
|
23.7
|
1.0
|
MG
|
C:MG1601
|
4.4
|
25.8
|
1.0
|
CA
|
C:THR90
|
4.5
|
25.1
|
1.0
|
OD1
|
C:ASP52
|
4.5
|
23.0
|
1.0
|
CA
|
C:GLY53
|
4.6
|
21.4
|
1.0
|
O
|
C:LYS51
|
4.7
|
20.8
|
1.0
|
OD1
|
C:ASP87
|
4.7
|
29.2
|
1.0
|
O5'
|
C:ADP1600
|
4.9
|
22.8
|
1.0
|
N
|
C:GLY88
|
4.9
|
24.6
|
1.0
|
C
|
C:ASP52
|
4.9
|
23.0
|
1.0
|
C
|
C:THR89
|
4.9
|
23.7
|
1.0
|
CA
|
C:ASP52
|
4.9
|
23.0
|
1.0
|
O
|
C:HOH1702
|
5.0
|
31.8
|
1.0
|
CG2
|
C:THR90
|
5.0
|
25.1
|
1.0
|
|
Fluorine binding site 10 out
of 21 in 8qxs
Go back to
Fluorine Binding Sites List in 8qxs
Fluorine binding site 10 out
of 21 in the Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 10 of Cryoem Structure of A GROEL14-GROES7 Complex in Presence of Adp-Befx with Wide GROEL7 Trans Ring Conformation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:F1602
b:26.8
occ:1.00
|
F1
|
D:BEF1602
|
0.0
|
26.8
|
1.0
|
BE
|
D:BEF1602
|
1.5
|
26.8
|
1.0
|
MG
|
D:MG1601
|
2.1
|
29.3
|
1.0
|
O1B
|
D:ADP1600
|
2.2
|
21.5
|
1.0
|
O3B
|
D:ADP1600
|
2.4
|
21.5
|
1.0
|
F2
|
D:BEF1602
|
2.5
|
26.8
|
1.0
|
F3
|
D:BEF1602
|
2.5
|
26.8
|
1.0
|
PB
|
D:ADP1600
|
2.6
|
21.5
|
1.0
|
OD1
|
D:ASP87
|
2.7
|
29.6
|
1.0
|
O3A
|
D:ADP1600
|
3.0
|
21.5
|
1.0
|
O
|
D:HOH1702
|
3.1
|
36.2
|
1.0
|
O2A
|
D:ADP1600
|
3.4
|
21.5
|
1.0
|
O
|
D:HOH1701
|
3.5
|
29.4
|
1.0
|
PA
|
D:ADP1600
|
3.8
|
21.5
|
1.0
|
CG
|
D:ASP87
|
3.9
|
29.6
|
1.0
|
O2B
|
D:ADP1600
|
4.1
|
21.5
|
1.0
|
K
|
D:K1603
|
4.2
|
31.9
|
1.0
|
N
|
D:GLY88
|
4.3
|
25.5
|
1.0
|
OD2
|
D:ASP87
|
4.5
|
29.6
|
1.0
|
OD2
|
D:ASP398
|
4.5
|
37.9
|
1.0
|
O1A
|
D:ADP1600
|
4.7
|
21.5
|
1.0
|
OD1
|
D:ASP52
|
4.8
|
24.2
|
1.0
|
CG
|
D:ASP398
|
4.8
|
37.9
|
1.0
|
CA
|
D:ASP87
|
4.9
|
29.6
|
1.0
|
O5'
|
D:ADP1600
|
5.0
|
21.5
|
1.0
|
|
Reference:
J.Wagner,
A.I.Caravajal,
F.Beck,
A.Bracher,
W.Wan,
S.Bohn,
R.Koerner,
W.Baumeister,
R.Fernandez-Busnadiego,
F.U.Hartl.
Visualizing Chaperonin Function in Situ By Cryo-Electron Tomography Nature 2024.
ISSN: ESSN 1476-4687
Page generated: Fri Aug 2 22:32:15 2024
|