Fluorine in PDB 8uaq: Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL018-21

Protein crystallography data

The structure of Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL018-21, PDB code: 8uaq was solved by Y.Chen, J.J.G.Tesmer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.77 / 2.80
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 138.248, 138.248, 71.059, 90, 90, 90
R / Rfree (%) 22.7 / 27.7

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL018-21 (pdb code 8uaq). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL018-21, PDB code: 8uaq:

Fluorine binding site 1 out of 1 in 8uaq

Go back to Fluorine Binding Sites List in 8uaq
Fluorine binding site 1 out of 1 in the Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL018-21


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL018-21 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F601

b:154.9
occ:1.00
F35 A:W3F601 0.0 154.9 1.0
C02 A:W3F601 1.4 154.7 1.0
H A:GLY198 2.1 204.0 1.0
C03 A:W3F601 2.3 152.7 1.0
H031 A:W3F601 2.5 184.6 1.0
C01 A:W3F601 2.5 157.0 1.0
N A:GLY198 2.6 168.9 1.0
H011 A:W3F601 2.7 189.7 1.0
C A:GLY198 2.9 160.4 1.0
CA A:GLY198 3.0 165.6 1.0
HA3 A:GLY198 3.1 200.1 1.0
N A:GLU199 3.3 152.6 1.0
O A:GLY198 3.3 162.1 1.0
HD12 A:LEU217 3.4 235.1 1.0
H A:GLU199 3.5 184.4 1.0
C A:PHE197 3.5 175.6 1.0
H A:PHE197 3.5 225.2 1.0
HB2 A:PHE197 3.7 223.9 1.0
C06 A:W3F601 3.7 147.5 1.0
HA3 A:GLY195 3.7 186.3 1.0
C04 A:W3F601 3.7 148.1 1.0
HE2 A:LYS215 3.7 179.8 1.0
N A:PHE197 3.8 186.5 1.0
HA2 A:GLY198 3.9 200.1 1.0
O A:ARG216 4.0 136.1 1.0
CA A:PHE197 4.0 184.6 1.0
HA A:GLU199 4.0 180.6 1.0
H A:GLY195 4.1 178.4 1.0
O A:GLU199 4.1 146.5 1.0
CA A:GLU199 4.1 149.4 1.0
HG3 A:LYS215 4.2 184.7 1.0
C05 A:W3F601 4.2 140.7 1.0
CB A:PHE197 4.2 185.4 1.0
HD11 A:LEU217 4.3 235.1 1.0
H A:GLY196 4.3 201.4 1.0
CD1 A:LEU217 4.3 194.8 1.0
CA A:GLY195 4.3 154.2 1.0
C A:GLY195 4.3 163.2 1.0
N A:GLY196 4.3 166.7 1.0
HB3 A:PHE197 4.3 223.9 1.0
N A:GLY195 4.4 147.6 1.0
O A:PHE197 4.4 167.6 1.0
C A:GLU199 4.4 143.5 1.0
H061 A:W3F601 4.4 178.3 1.0
H041 A:W3F601 4.5 179.0 1.0
C A:GLY196 4.5 174.8 1.0
HA A:LEU217 4.5 210.2 1.0
CE A:LYS215 4.6 148.7 1.0
HE3 A:LYS215 4.8 179.8 1.0
O A:GLY195 4.8 162.7 1.0
HG22 A:VAL200 4.8 171.7 1.0
HG23 A:VAL200 4.8 171.7 1.0
HD13 A:LEU217 4.8 235.1 1.0
HG A:LEU217 4.9 254.6 1.0
HA A:PHE197 4.9 222.9 1.0
C A:ARG216 5.0 130.3 1.0

Reference:

Y.Chen, A.Sonawane, R.Manda, R.K.Gadi, J.J.G.Tesmer, A.K.Ghosh. Development of A New Class of Potent and Highly Selective G Protein-Coupled Receptor Kinase 5 Inhibitors and Structural Insight From Crystal Structures of Inhibitor Complexes. Eur.J.Med.Chem. V. 264 15931 2023.
ISSN: ISSN 0223-5234
PubMed: 38016297
DOI: 10.1016/J.EJMECH.2023.115931
Page generated: Sat Aug 3 00:50:56 2024

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