Fluorine in PDB 8ukz: Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation
Protein crystallography data
The structure of Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation, PDB code: 8ukz
was solved by
M.H.Hansen,
M.J.Cryle,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
47.24 /
1.95
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
61.957,
94.48,
105.985,
90,
92.68,
90
|
R / Rfree (%)
|
20.5 /
22.3
|
Other elements in 8ukz:
The structure of Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation also contains other interesting chemical elements:
Fluorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Fluorine atom in the Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation
(pdb code 8ukz). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 12 binding sites of Fluorine where determined in the
Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation, PDB code: 8ukz:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Fluorine binding site 1 out
of 12 in 8ukz
Go back to
Fluorine Binding Sites List in 8ukz
Fluorine binding site 1 out
of 12 in the Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F402
b:54.8
occ:1.00
|
F1
|
A:TFA402
|
0.0
|
54.8
|
1.0
|
C2
|
A:TFA402
|
1.4
|
52.5
|
1.0
|
F2
|
A:TFA402
|
2.2
|
56.9
|
1.0
|
F3
|
A:TFA402
|
2.2
|
49.0
|
1.0
|
C1
|
A:TFA402
|
2.4
|
46.5
|
1.0
|
HA3
|
A:GLY348
|
2.4
|
40.8
|
1.0
|
OXT
|
A:TFA402
|
2.7
|
43.5
|
1.0
|
C
|
A:GLY348
|
2.9
|
36.8
|
1.0
|
N
|
A:LEU349
|
3.1
|
33.1
|
1.0
|
CA
|
A:GLY348
|
3.1
|
33.9
|
1.0
|
H
|
A:LEU349
|
3.2
|
39.8
|
1.0
|
O
|
A:GLY348
|
3.4
|
36.6
|
1.0
|
O
|
A:TFA402
|
3.5
|
42.6
|
1.0
|
HG
|
A:LEU349
|
3.5
|
45.1
|
1.0
|
HA
|
A:LEU349
|
3.6
|
41.6
|
1.0
|
HD21
|
A:LEU107
|
3.6
|
54.5
|
1.0
|
O
|
A:HOH511
|
3.7
|
34.8
|
1.0
|
HA2
|
A:GLY348
|
3.7
|
40.8
|
1.0
|
HD23
|
A:LEU349
|
3.7
|
49.7
|
1.0
|
CA
|
A:LEU349
|
3.9
|
34.6
|
1.0
|
O
|
A:HOH574
|
4.0
|
47.2
|
1.0
|
N
|
A:GLY348
|
4.2
|
32.4
|
1.0
|
H
|
A:GLY348
|
4.2
|
38.9
|
1.0
|
CG
|
A:LEU349
|
4.3
|
37.5
|
1.0
|
HD1
|
B:HIS96
|
4.4
|
47.0
|
1.0
|
CD2
|
A:LEU349
|
4.4
|
41.3
|
1.0
|
HD11
|
A:LEU102
|
4.5
|
46.6
|
1.0
|
HD12
|
A:LEU352
|
4.5
|
74.8
|
1.0
|
HD21
|
A:LEU102
|
4.5
|
47.5
|
1.0
|
CD2
|
A:LEU107
|
4.6
|
45.4
|
1.0
|
CB
|
A:LEU349
|
4.6
|
34.7
|
1.0
|
HD11
|
A:LEU107
|
4.6
|
58.8
|
1.0
|
HB2
|
A:LEU352
|
4.6
|
51.1
|
1.0
|
HD13
|
A:LEU352
|
4.6
|
74.8
|
1.0
|
HD21
|
A:LEU349
|
4.6
|
49.7
|
1.0
|
HD22
|
A:LEU107
|
4.8
|
54.5
|
1.0
|
HE1
|
B:HIS96
|
4.8
|
42.9
|
1.0
|
ND1
|
B:HIS96
|
4.9
|
39.1
|
1.0
|
HB2
|
A:LEU349
|
5.0
|
41.7
|
1.0
|
HD23
|
A:LEU107
|
5.0
|
54.5
|
1.0
|
|
Fluorine binding site 2 out
of 12 in 8ukz
Go back to
Fluorine Binding Sites List in 8ukz
Fluorine binding site 2 out
of 12 in the Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F402
b:56.9
occ:1.00
|
F2
|
A:TFA402
|
0.0
|
56.9
|
1.0
|
C2
|
A:TFA402
|
1.4
|
52.5
|
1.0
|
F1
|
A:TFA402
|
2.2
|
54.8
|
1.0
|
F3
|
A:TFA402
|
2.2
|
49.0
|
1.0
|
C1
|
A:TFA402
|
2.4
|
46.5
|
1.0
|
HD21
|
A:LEU107
|
2.4
|
54.5
|
1.0
|
HD11
|
A:LEU107
|
2.5
|
58.8
|
1.0
|
O
|
A:TFA402
|
2.7
|
42.6
|
1.0
|
HD1
|
B:HIS96
|
2.8
|
47.0
|
1.0
|
ND1
|
B:HIS96
|
3.2
|
39.1
|
1.0
|
CD1
|
A:LEU107
|
3.3
|
49.0
|
1.0
|
HD13
|
A:LEU107
|
3.3
|
58.8
|
1.0
|
CD2
|
A:LEU107
|
3.3
|
45.4
|
1.0
|
OXT
|
A:TFA402
|
3.5
|
43.5
|
1.0
|
HE1
|
B:HIS96
|
3.5
|
42.9
|
1.0
|
CE1
|
B:HIS96
|
3.6
|
35.7
|
1.0
|
CG
|
A:LEU107
|
3.8
|
43.3
|
1.0
|
HD22
|
A:LEU107
|
3.8
|
54.5
|
1.0
|
HD23
|
A:LEU107
|
3.9
|
54.5
|
1.0
|
HG
|
A:LEU107
|
4.0
|
52.1
|
1.0
|
HD12
|
A:LEU107
|
4.1
|
58.8
|
1.0
|
CG
|
B:HIS96
|
4.1
|
36.0
|
1.0
|
HA3
|
A:GLY348
|
4.3
|
40.8
|
1.0
|
O
|
A:HOH574
|
4.3
|
47.2
|
1.0
|
HB3
|
B:HIS96
|
4.5
|
41.4
|
1.0
|
HB2
|
B:HIS96
|
4.5
|
41.4
|
1.0
|
NE2
|
B:HIS96
|
4.5
|
33.2
|
1.0
|
HD12
|
A:LEU352
|
4.6
|
74.8
|
1.0
|
CB
|
B:HIS96
|
4.6
|
34.5
|
1.0
|
HD23
|
A:LEU349
|
4.7
|
49.7
|
1.0
|
CD2
|
B:HIS96
|
4.8
|
36.5
|
1.0
|
HG
|
A:LEU349
|
5.0
|
45.1
|
1.0
|
NE2
|
B:GLN218
|
5.0
|
45.2
|
1.0
|
|
Fluorine binding site 3 out
of 12 in 8ukz
Go back to
Fluorine Binding Sites List in 8ukz
Fluorine binding site 3 out
of 12 in the Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F402
b:49.0
occ:1.00
|
F3
|
A:TFA402
|
0.0
|
49.0
|
1.0
|
C2
|
A:TFA402
|
1.4
|
52.5
|
1.0
|
F1
|
A:TFA402
|
2.2
|
54.8
|
1.0
|
F2
|
A:TFA402
|
2.2
|
56.9
|
1.0
|
C1
|
A:TFA402
|
2.4
|
46.5
|
1.0
|
HE1
|
B:HIS96
|
2.8
|
42.9
|
1.0
|
HD21
|
A:LEU107
|
2.8
|
54.5
|
1.0
|
HD11
|
A:LEU102
|
2.9
|
46.6
|
1.0
|
HG
|
A:LEU349
|
3.0
|
45.1
|
1.0
|
O
|
A:TFA402
|
3.1
|
42.6
|
1.0
|
HD1
|
B:HIS96
|
3.1
|
47.0
|
1.0
|
HD23
|
A:LEU349
|
3.2
|
49.7
|
1.0
|
OXT
|
A:TFA402
|
3.2
|
43.5
|
1.0
|
HD21
|
A:LEU349
|
3.3
|
49.7
|
1.0
|
CE1
|
B:HIS96
|
3.4
|
35.7
|
1.0
|
ND1
|
B:HIS96
|
3.5
|
39.1
|
1.0
|
CD2
|
A:LEU349
|
3.6
|
41.3
|
1.0
|
CD2
|
A:LEU107
|
3.7
|
45.4
|
1.0
|
HG
|
A:LEU102
|
3.7
|
45.6
|
1.0
|
HD21
|
A:LEU102
|
3.7
|
47.5
|
1.0
|
CD1
|
A:LEU102
|
3.7
|
38.8
|
1.0
|
CG
|
A:LEU349
|
3.8
|
37.5
|
1.0
|
HD23
|
A:LEU107
|
3.8
|
54.5
|
1.0
|
HD12
|
A:LEU102
|
3.9
|
46.6
|
1.0
|
O
|
A:HOH511
|
4.1
|
34.8
|
1.0
|
CG
|
A:LEU102
|
4.1
|
38.0
|
1.0
|
HD11
|
A:LEU107
|
4.2
|
58.8
|
1.0
|
HD22
|
A:LEU107
|
4.2
|
54.5
|
1.0
|
H
|
A:LEU349
|
4.3
|
39.8
|
1.0
|
HA
|
A:LEU349
|
4.3
|
41.6
|
1.0
|
N
|
A:LEU349
|
4.4
|
33.1
|
1.0
|
CD2
|
A:LEU102
|
4.4
|
39.5
|
1.0
|
HA3
|
A:GLY348
|
4.4
|
40.8
|
1.0
|
HD22
|
A:LEU349
|
4.5
|
49.7
|
1.0
|
HD11
|
A:LEU349
|
4.5
|
46.2
|
1.0
|
HD13
|
A:LEU102
|
4.5
|
46.6
|
1.0
|
HG
|
A:LEU107
|
4.6
|
52.1
|
1.0
|
NE2
|
B:HIS96
|
4.6
|
33.2
|
1.0
|
CG
|
A:LEU107
|
4.6
|
43.3
|
1.0
|
CA
|
A:LEU349
|
4.7
|
34.6
|
1.0
|
C
|
A:GLY348
|
4.7
|
36.8
|
1.0
|
CD1
|
A:LEU349
|
4.8
|
38.4
|
1.0
|
CB
|
A:LEU349
|
4.8
|
34.7
|
1.0
|
CD1
|
A:LEU107
|
4.8
|
49.0
|
1.0
|
CG
|
B:HIS96
|
4.8
|
36.0
|
1.0
|
HD2
|
A:HIS103
|
4.8
|
40.2
|
1.0
|
HD23
|
A:LEU102
|
4.9
|
47.5
|
1.0
|
HD13
|
A:LEU352
|
5.0
|
74.8
|
1.0
|
O
|
A:LEU102
|
5.0
|
31.0
|
1.0
|
HD13
|
A:LEU107
|
5.0
|
58.8
|
1.0
|
|
Fluorine binding site 4 out
of 12 in 8ukz
Go back to
Fluorine Binding Sites List in 8ukz
Fluorine binding site 4 out
of 12 in the Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F403
b:54.4
occ:1.00
|
F1
|
A:TFA403
|
0.0
|
54.4
|
1.0
|
C2
|
A:TFA403
|
1.4
|
52.4
|
1.0
|
F2
|
A:TFA403
|
2.2
|
58.8
|
1.0
|
F3
|
A:TFA403
|
2.2
|
60.4
|
1.0
|
C1
|
A:TFA403
|
2.4
|
48.1
|
1.0
|
O
|
A:TFA403
|
2.8
|
50.6
|
1.0
|
HA
|
A:ALA231
|
2.8
|
45.5
|
1.0
|
OXT
|
A:TFA403
|
3.4
|
48.0
|
1.0
|
HB3
|
A:HIS234
|
3.5
|
46.1
|
1.0
|
HB2
|
A:ALA231
|
3.7
|
46.6
|
1.0
|
CA
|
A:ALA231
|
3.7
|
37.9
|
1.0
|
O
|
A:HOH534
|
3.9
|
42.0
|
1.0
|
HD1
|
A:HIS234
|
3.9
|
42.3
|
1.0
|
HE22
|
A:GLN84
|
4.0
|
48.0
|
1.0
|
CB
|
A:ALA231
|
4.1
|
38.8
|
1.0
|
HB1
|
A:ALA231
|
4.1
|
46.6
|
1.0
|
HE
|
A:ARG230
|
4.1
|
53.8
|
1.0
|
HE21
|
A:GLN84
|
4.3
|
48.0
|
1.0
|
N
|
A:ALA231
|
4.3
|
32.2
|
1.0
|
NE2
|
A:GLN84
|
4.3
|
39.9
|
1.0
|
O
|
A:ARG230
|
4.4
|
37.3
|
1.0
|
CB
|
A:HIS234
|
4.4
|
38.4
|
1.0
|
HG2
|
A:ARG230
|
4.4
|
52.1
|
1.0
|
ND1
|
A:HIS234
|
4.5
|
35.1
|
1.0
|
HE
|
A:ARG188
|
4.6
|
79.3
|
1.0
|
O
|
A:HOH576
|
4.6
|
43.8
|
1.0
|
C
|
A:ARG230
|
4.6
|
38.8
|
1.0
|
HG21
|
A:ILE168
|
4.6
|
44.0
|
1.0
|
H
|
A:ALA235
|
4.7
|
44.8
|
1.0
|
HB2
|
A:HIS234
|
4.7
|
46.1
|
1.0
|
HH21
|
A:ARG230
|
4.7
|
54.4
|
1.0
|
H
|
A:ALA231
|
4.7
|
38.7
|
1.0
|
C
|
A:ALA231
|
4.8
|
36.7
|
1.0
|
NE
|
A:ARG230
|
4.8
|
44.8
|
1.0
|
O
|
A:ALA231
|
4.8
|
37.0
|
1.0
|
CG
|
A:HIS234
|
4.9
|
38.5
|
1.0
|
HB2
|
A:ALA235
|
5.0
|
46.2
|
1.0
|
|
Fluorine binding site 5 out
of 12 in 8ukz
Go back to
Fluorine Binding Sites List in 8ukz
Fluorine binding site 5 out
of 12 in the Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F403
b:58.8
occ:1.00
|
F2
|
A:TFA403
|
0.0
|
58.8
|
1.0
|
C2
|
A:TFA403
|
1.4
|
52.4
|
1.0
|
F3
|
A:TFA403
|
2.2
|
60.4
|
1.0
|
F1
|
A:TFA403
|
2.2
|
54.4
|
1.0
|
HE
|
A:ARG230
|
2.3
|
53.8
|
1.0
|
C1
|
A:TFA403
|
2.4
|
48.1
|
1.0
|
HG2
|
A:ARG230
|
2.5
|
52.1
|
1.0
|
HA
|
A:ALA231
|
2.5
|
45.5
|
1.0
|
OXT
|
A:TFA403
|
2.7
|
48.0
|
1.0
|
N
|
A:ALA231
|
2.9
|
32.2
|
1.0
|
C
|
A:ARG230
|
2.9
|
38.8
|
1.0
|
HB3
|
A:ARG230
|
2.9
|
50.1
|
1.0
|
NE
|
A:ARG230
|
3.0
|
44.8
|
1.0
|
O
|
A:ARG230
|
3.0
|
37.3
|
1.0
|
O
|
A:HOH534
|
3.1
|
42.0
|
1.0
|
CA
|
A:ALA231
|
3.1
|
37.9
|
1.0
|
CG
|
A:ARG230
|
3.2
|
43.4
|
1.0
|
H
|
A:ALA231
|
3.2
|
38.7
|
1.0
|
HB2
|
A:ALA231
|
3.4
|
46.6
|
1.0
|
CB
|
A:ARG230
|
3.4
|
41.6
|
1.0
|
O
|
A:TFA403
|
3.5
|
50.6
|
1.0
|
CD
|
A:ARG230
|
3.6
|
43.6
|
1.0
|
HH21
|
A:ARG230
|
3.7
|
54.4
|
1.0
|
CA
|
A:ARG230
|
3.7
|
36.8
|
1.0
|
CB
|
A:ALA231
|
3.8
|
38.8
|
1.0
|
HB3
|
A:HIS234
|
3.9
|
46.1
|
1.0
|
HD2
|
A:ARG230
|
3.9
|
52.4
|
1.0
|
CZ
|
A:ARG230
|
4.0
|
46.7
|
1.0
|
O
|
A:ASN227
|
4.0
|
37.1
|
1.0
|
HG3
|
A:ARG230
|
4.0
|
52.1
|
1.0
|
NH2
|
A:ARG230
|
4.2
|
45.2
|
1.0
|
HE22
|
A:GLN84
|
4.2
|
48.0
|
1.0
|
HB1
|
A:ALA231
|
4.3
|
46.6
|
1.0
|
HB2
|
A:ARG230
|
4.3
|
50.1
|
1.0
|
HA
|
A:ARG230
|
4.3
|
44.2
|
1.0
|
C
|
A:ALA231
|
4.4
|
36.7
|
1.0
|
HD3
|
A:ARG230
|
4.4
|
52.4
|
1.0
|
HB2
|
A:HIS234
|
4.5
|
46.1
|
1.0
|
HB3
|
A:ALA231
|
4.5
|
46.6
|
1.0
|
H
|
A:HIS234
|
4.6
|
43.0
|
1.0
|
CB
|
A:HIS234
|
4.6
|
38.4
|
1.0
|
N
|
A:ARG230
|
4.8
|
37.6
|
1.0
|
O
|
A:ALA231
|
4.9
|
37.0
|
1.0
|
NE2
|
A:GLN84
|
4.9
|
39.9
|
1.0
|
HD23
|
A:LEU191
|
4.9
|
50.8
|
1.0
|
H
|
A:ARG230
|
4.9
|
45.2
|
1.0
|
HH22
|
A:ARG230
|
5.0
|
54.4
|
1.0
|
|
Fluorine binding site 6 out
of 12 in 8ukz
Go back to
Fluorine Binding Sites List in 8ukz
Fluorine binding site 6 out
of 12 in the Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F403
b:60.4
occ:1.00
|
F3
|
A:TFA403
|
0.0
|
60.4
|
1.0
|
C2
|
A:TFA403
|
1.4
|
52.4
|
1.0
|
F2
|
A:TFA403
|
2.2
|
58.8
|
1.0
|
F1
|
A:TFA403
|
2.2
|
54.4
|
1.0
|
C1
|
A:TFA403
|
2.4
|
48.1
|
1.0
|
O
|
A:HOH534
|
2.6
|
42.0
|
1.0
|
HH21
|
A:ARG230
|
2.6
|
54.4
|
1.0
|
HE
|
A:ARG230
|
2.7
|
53.8
|
1.0
|
O
|
A:TFA403
|
2.9
|
50.6
|
1.0
|
NH2
|
A:ARG230
|
3.1
|
45.2
|
1.0
|
OXT
|
A:TFA403
|
3.2
|
48.0
|
1.0
|
NE
|
A:ARG230
|
3.3
|
44.8
|
1.0
|
HE22
|
A:GLN84
|
3.3
|
48.0
|
1.0
|
CZ
|
A:ARG230
|
3.5
|
46.7
|
1.0
|
HE
|
A:ARG188
|
3.6
|
79.3
|
1.0
|
HH22
|
A:ARG230
|
3.7
|
54.4
|
1.0
|
HE21
|
A:GLN84
|
3.7
|
48.0
|
1.0
|
NE2
|
A:GLN84
|
3.8
|
39.9
|
1.0
|
HD3
|
A:ARG188
|
3.9
|
63.9
|
1.0
|
HB2
|
A:ALA231
|
4.1
|
46.6
|
1.0
|
HA
|
A:ALA231
|
4.1
|
45.5
|
1.0
|
HG2
|
A:ARG230
|
4.2
|
52.1
|
1.0
|
HG2
|
A:ARG188
|
4.3
|
54.9
|
1.0
|
NE
|
A:ARG188
|
4.3
|
66.0
|
1.0
|
HB3
|
A:ARG230
|
4.4
|
50.1
|
1.0
|
CD
|
A:ARG230
|
4.4
|
43.6
|
1.0
|
HD2
|
A:ARG230
|
4.5
|
52.4
|
1.0
|
CD
|
A:ARG188
|
4.5
|
53.2
|
1.0
|
NH1
|
A:ARG230
|
4.6
|
44.5
|
1.0
|
CG
|
A:ARG230
|
4.7
|
43.4
|
1.0
|
CA
|
A:ALA231
|
4.7
|
37.9
|
1.0
|
N
|
A:ALA231
|
4.8
|
32.2
|
1.0
|
CB
|
A:ALA231
|
4.8
|
38.8
|
1.0
|
O
|
A:ASN227
|
4.9
|
37.1
|
1.0
|
H
|
A:ALA231
|
4.9
|
38.7
|
1.0
|
CG
|
A:ARG188
|
4.9
|
45.7
|
1.0
|
|
Fluorine binding site 7 out
of 12 in 8ukz
Go back to
Fluorine Binding Sites List in 8ukz
Fluorine binding site 7 out
of 12 in the Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F404
b:69.4
occ:1.00
|
F1
|
B:TFA404
|
0.0
|
69.4
|
1.0
|
C2
|
B:TFA404
|
1.4
|
54.9
|
1.0
|
F2
|
B:TFA404
|
2.2
|
53.2
|
1.0
|
F3
|
B:TFA404
|
2.2
|
51.5
|
1.0
|
C1
|
B:TFA404
|
2.4
|
51.4
|
1.0
|
OXT
|
B:TFA404
|
2.7
|
56.1
|
1.0
|
O
|
B:HOH551
|
3.2
|
39.6
|
1.0
|
HE22
|
B:GLN84
|
3.3
|
45.4
|
1.0
|
HE
|
B:ARG188
|
3.4
|
73.7
|
1.0
|
HE21
|
B:GLN84
|
3.4
|
45.4
|
1.0
|
O
|
B:TFA404
|
3.5
|
51.1
|
1.0
|
NE2
|
B:GLN84
|
3.6
|
37.7
|
1.0
|
HH21
|
B:ARG230
|
3.7
|
55.4
|
1.0
|
HE
|
B:ARG230
|
3.7
|
50.3
|
1.0
|
HA
|
B:ALA231
|
3.9
|
43.0
|
1.0
|
HB2
|
B:ALA231
|
4.1
|
40.9
|
1.0
|
NE
|
B:ARG188
|
4.2
|
61.4
|
1.0
|
NH2
|
B:ARG230
|
4.2
|
46.1
|
1.0
|
NE
|
B:ARG230
|
4.4
|
41.9
|
1.0
|
HD3
|
B:ARG188
|
4.4
|
63.3
|
1.0
|
HH21
|
B:ARG188
|
4.5
|
85.0
|
1.0
|
HG2
|
B:ARG188
|
4.5
|
56.4
|
1.0
|
CZ
|
B:ARG230
|
4.6
|
43.2
|
1.0
|
CA
|
B:ALA231
|
4.7
|
35.8
|
1.0
|
CD
|
B:GLN84
|
4.7
|
39.0
|
1.0
|
HH22
|
B:ARG230
|
4.7
|
55.4
|
1.0
|
CB
|
B:ALA231
|
4.8
|
34.0
|
1.0
|
CD
|
B:ARG188
|
4.8
|
52.6
|
1.0
|
HG2
|
B:ARG230
|
4.8
|
42.9
|
1.0
|
HG21
|
B:ILE168
|
4.8
|
40.4
|
1.0
|
HB1
|
B:ALA231
|
4.9
|
40.9
|
1.0
|
HB3
|
B:HIS234
|
4.9
|
39.7
|
1.0
|
|
Fluorine binding site 8 out
of 12 in 8ukz
Go back to
Fluorine Binding Sites List in 8ukz
Fluorine binding site 8 out
of 12 in the Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F404
b:53.2
occ:1.00
|
F2
|
B:TFA404
|
0.0
|
53.2
|
1.0
|
C2
|
B:TFA404
|
1.4
|
54.9
|
1.0
|
HE
|
B:ARG230
|
2.0
|
50.3
|
1.0
|
F1
|
B:TFA404
|
2.2
|
69.4
|
1.0
|
F3
|
B:TFA404
|
2.2
|
51.5
|
1.0
|
C1
|
B:TFA404
|
2.4
|
51.4
|
1.0
|
O
|
B:HOH551
|
2.7
|
39.6
|
1.0
|
NE
|
B:ARG230
|
2.8
|
41.9
|
1.0
|
O
|
B:TFA404
|
2.8
|
51.1
|
1.0
|
HG2
|
B:ARG230
|
2.8
|
42.9
|
1.0
|
HA
|
B:ALA231
|
3.0
|
43.0
|
1.0
|
HB3
|
B:ARG230
|
3.0
|
40.9
|
1.0
|
HH21
|
B:ARG230
|
3.2
|
55.4
|
1.0
|
N
|
B:ALA231
|
3.3
|
32.7
|
1.0
|
CG
|
B:ARG230
|
3.4
|
35.7
|
1.0
|
C
|
B:ARG230
|
3.4
|
30.4
|
1.0
|
OXT
|
B:TFA404
|
3.5
|
56.1
|
1.0
|
CD
|
B:ARG230
|
3.5
|
39.6
|
1.0
|
HB2
|
B:ALA231
|
3.5
|
40.9
|
1.0
|
CA
|
B:ALA231
|
3.6
|
35.8
|
1.0
|
H
|
B:ALA231
|
3.6
|
39.3
|
1.0
|
CZ
|
B:ARG230
|
3.6
|
43.2
|
1.0
|
CB
|
B:ARG230
|
3.6
|
34.0
|
1.0
|
O
|
B:ARG230
|
3.6
|
31.8
|
1.0
|
NH2
|
B:ARG230
|
3.7
|
46.1
|
1.0
|
HD2
|
B:ARG230
|
3.8
|
47.6
|
1.0
|
HE22
|
B:GLN84
|
3.8
|
45.4
|
1.0
|
O
|
B:ASN227
|
4.0
|
30.8
|
1.0
|
CB
|
B:ALA231
|
4.1
|
34.0
|
1.0
|
CA
|
B:ARG230
|
4.1
|
35.3
|
1.0
|
HG3
|
B:ARG230
|
4.3
|
42.9
|
1.0
|
HB3
|
B:HIS234
|
4.3
|
39.7
|
1.0
|
HD3
|
B:ARG230
|
4.4
|
47.6
|
1.0
|
HH22
|
B:ARG230
|
4.4
|
55.4
|
1.0
|
HB2
|
B:ARG230
|
4.5
|
40.9
|
1.0
|
NE2
|
B:GLN84
|
4.5
|
37.7
|
1.0
|
HB1
|
B:ALA231
|
4.6
|
40.9
|
1.0
|
HE21
|
B:GLN84
|
4.7
|
45.4
|
1.0
|
HG2
|
B:ARG188
|
4.8
|
56.4
|
1.0
|
NH1
|
B:ARG230
|
4.8
|
44.0
|
1.0
|
HA
|
B:ARG230
|
4.8
|
42.5
|
1.0
|
HB3
|
B:ALA231
|
4.8
|
40.9
|
1.0
|
HE
|
B:ARG188
|
4.8
|
73.7
|
1.0
|
C
|
B:ALA231
|
4.9
|
31.0
|
1.0
|
HB2
|
B:HIS234
|
4.9
|
39.7
|
1.0
|
HD3
|
B:ARG188
|
5.0
|
63.3
|
1.0
|
|
Fluorine binding site 9 out
of 12 in 8ukz
Go back to
Fluorine Binding Sites List in 8ukz
Fluorine binding site 9 out
of 12 in the Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F404
b:51.5
occ:1.00
|
F3
|
B:TFA404
|
0.0
|
51.5
|
1.0
|
C2
|
B:TFA404
|
1.4
|
54.9
|
1.0
|
F1
|
B:TFA404
|
2.2
|
69.4
|
1.0
|
F2
|
B:TFA404
|
2.2
|
53.2
|
1.0
|
C1
|
B:TFA404
|
2.3
|
51.4
|
1.0
|
HA
|
B:ALA231
|
2.4
|
43.0
|
1.0
|
HB3
|
B:HIS234
|
2.8
|
39.7
|
1.0
|
O
|
B:TFA404
|
3.1
|
51.1
|
1.0
|
OXT
|
B:TFA404
|
3.1
|
56.1
|
1.0
|
CA
|
B:ALA231
|
3.3
|
35.8
|
1.0
|
HD1
|
B:HIS234
|
3.6
|
38.0
|
1.0
|
O
|
B:ARG230
|
3.7
|
31.8
|
1.0
|
CB
|
B:HIS234
|
3.7
|
33.0
|
1.0
|
HB2
|
B:ALA231
|
3.8
|
40.9
|
1.0
|
N
|
B:ALA231
|
3.9
|
32.7
|
1.0
|
HB2
|
B:HIS234
|
3.9
|
39.7
|
1.0
|
CB
|
B:ALA231
|
4.0
|
34.0
|
1.0
|
H
|
B:ALA235
|
4.0
|
40.6
|
1.0
|
HG2
|
B:ARG230
|
4.0
|
42.9
|
1.0
|
HB1
|
B:ALA231
|
4.0
|
40.9
|
1.0
|
C
|
B:ARG230
|
4.1
|
30.4
|
1.0
|
ND1
|
B:HIS234
|
4.1
|
31.6
|
1.0
|
HE
|
B:ARG230
|
4.2
|
50.3
|
1.0
|
O
|
B:ALA231
|
4.2
|
31.4
|
1.0
|
O
|
B:HOH551
|
4.2
|
39.6
|
1.0
|
C
|
B:ALA231
|
4.3
|
31.0
|
1.0
|
H
|
B:HIS234
|
4.3
|
32.3
|
1.0
|
CG
|
B:HIS234
|
4.3
|
26.4
|
1.0
|
H
|
B:ALA231
|
4.4
|
39.3
|
1.0
|
HE22
|
B:GLN84
|
4.5
|
45.4
|
1.0
|
N
|
B:ALA235
|
4.5
|
33.7
|
1.0
|
HG21
|
B:ILE168
|
4.6
|
40.4
|
1.0
|
HB2
|
B:ALA235
|
4.6
|
43.7
|
1.0
|
CA
|
B:HIS234
|
4.7
|
32.2
|
1.0
|
NE
|
B:ARG230
|
4.9
|
41.9
|
1.0
|
NE2
|
B:GLN84
|
4.9
|
37.7
|
1.0
|
N
|
B:HIS234
|
4.9
|
26.8
|
1.0
|
CG
|
B:ARG230
|
4.9
|
35.7
|
1.0
|
HB3
|
B:ALA231
|
4.9
|
40.9
|
1.0
|
HB3
|
B:ARG230
|
4.9
|
40.9
|
1.0
|
HE21
|
B:GLN84
|
4.9
|
45.4
|
1.0
|
C
|
B:HIS234
|
5.0
|
31.1
|
1.0
|
|
Fluorine binding site 10 out
of 12 in 8ukz
Go back to
Fluorine Binding Sites List in 8ukz
Fluorine binding site 10 out
of 12 in the Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 10 of Structure of P450BLT From Micromonospora Sp. Mw-13 with E238A Mutation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F403
b:64.9
occ:1.00
|
F1
|
C:TFA403
|
0.0
|
64.9
|
1.0
|
C2
|
C:TFA403
|
1.4
|
60.7
|
1.0
|
F2
|
C:TFA403
|
2.2
|
78.4
|
1.0
|
F3
|
C:TFA403
|
2.2
|
69.7
|
1.0
|
C1
|
C:TFA403
|
2.3
|
51.6
|
1.0
|
O
|
C:TFA403
|
2.5
|
51.0
|
1.0
|
ND1
|
C:HIS254
|
2.6
|
55.9
|
1.0
|
CG
|
C:HIS254
|
2.9
|
57.1
|
1.0
|
HH11
|
C:ARG250
|
3.1
|
44.2
|
1.0
|
HB2
|
C:HIS254
|
3.1
|
63.2
|
1.0
|
CE1
|
C:HIS254
|
3.1
|
64.4
|
1.0
|
HG3
|
C:ARG250
|
3.2
|
48.6
|
1.0
|
HD11
|
C:LEU257
|
3.3
|
62.7
|
1.0
|
CB
|
C:HIS254
|
3.4
|
52.6
|
1.0
|
CD2
|
C:HIS254
|
3.4
|
58.0
|
1.0
|
OXT
|
C:TFA403
|
3.5
|
45.6
|
1.0
|
HG2
|
C:ARG250
|
3.5
|
48.6
|
1.0
|
NE2
|
C:HIS254
|
3.5
|
63.0
|
1.0
|
HE1
|
C:HIS254
|
3.5
|
77.4
|
1.0
|
HD3
|
C:ARG250
|
3.6
|
44.5
|
1.0
|
HB3
|
C:HIS254
|
3.6
|
63.2
|
1.0
|
CG
|
C:ARG250
|
3.7
|
40.5
|
1.0
|
NH1
|
C:ARG250
|
3.9
|
36.8
|
1.0
|
HD12
|
C:LEU257
|
4.0
|
62.7
|
1.0
|
HD2
|
C:HIS254
|
4.0
|
69.7
|
1.0
|
CD1
|
C:LEU257
|
4.1
|
52.2
|
1.0
|
HE2
|
C:HIS254
|
4.1
|
75.7
|
1.0
|
CD
|
C:ARG250
|
4.1
|
37.0
|
1.0
|
HH12
|
C:ARG250
|
4.2
|
44.2
|
1.0
|
HG
|
C:LEU257
|
4.3
|
66.6
|
1.0
|
HD21
|
C:LEU257
|
4.4
|
72.1
|
1.0
|
O
|
C:ARG250
|
4.6
|
41.6
|
1.0
|
HG23
|
C:VAL325
|
4.7
|
48.1
|
1.0
|
CG
|
C:LEU257
|
4.7
|
55.4
|
1.0
|
HD13
|
C:LEU257
|
4.8
|
62.7
|
1.0
|
CZ
|
C:ARG250
|
4.9
|
37.1
|
1.0
|
CA
|
C:HIS254
|
4.9
|
51.1
|
1.0
|
HD2
|
C:ARG250
|
4.9
|
44.5
|
1.0
|
NE
|
C:ARG250
|
5.0
|
38.6
|
1.0
|
|
Reference:
M.H.Hansen,
A.Keto,
M.Treisman,
V.M.Sasi,
L.Coe,
Y.Zhao,
L.Padva,
C.Hess,
V.Leichthammer,
D.L.Machell,
R.B.Schittenhelm,
C.J.Jackson,
J.Tailhades,
M.Crusemann,
J.J.De Voss,
E.H.Krenske,
M.J.Cryle.
Structural Insights Into A Side Chain Cross-Linking Biarylitide P450 From Ripp Biosynthesis Acs Catalysis 812 2024.
ISSN: ESSN 2155-5435
DOI: 10.1021/ACSCATAL.3C05417
Page generated: Sat Aug 3 00:57:09 2024
|