Fluorine in PDB 8uz1: Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx)
Other elements in 8uz1:
The structure of Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx) also contains other interesting chemical elements:
Fluorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
27;
Binding sites:
The binding sites of Fluorine atom in the Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx)
(pdb code 8uz1). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 27 binding sites of Fluorine where determined in the
Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx), PDB code: 8uz1:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Fluorine binding site 1 out
of 27 in 8uz1
Go back to
Fluorine Binding Sites List in 8uz1
Fluorine binding site 1 out
of 27 in the Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx)
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:F403
b:23.5
occ:1.00
|
F1
|
J:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
J:BEF403
|
1.5
|
23.5
|
1.0
|
|
H
|
J:GLY158
|
1.9
|
29.3
|
1.0
|
|
H
|
J:VAL159
|
2.2
|
5.8
|
1.0
|
|
F3
|
J:BEF403
|
2.4
|
23.5
|
1.0
|
|
F2
|
J:BEF403
|
2.4
|
23.5
|
1.0
|
|
O3B
|
J:ADP401
|
2.4
|
22.7
|
1.0
|
|
HA3
|
J:GLY156
|
2.5
|
15.7
|
1.0
|
|
HB2
|
J:SER14
|
2.7
|
20.0
|
1.0
|
|
HG12
|
J:VAL159
|
2.7
|
32.0
|
1.0
|
|
H
|
J:ASP157
|
2.8
|
18.2
|
1.0
|
|
HG
|
J:SER14
|
2.8
|
29.0
|
1.0
|
|
N
|
J:GLY158
|
2.8
|
29.3
|
1.0
|
|
N
|
J:VAL159
|
3.1
|
5.8
|
1.0
|
|
N
|
J:ASP157
|
3.2
|
18.2
|
1.0
|
|
CA
|
J:GLY156
|
3.4
|
15.7
|
1.0
|
|
OG
|
J:SER14
|
3.4
|
29.0
|
1.0
|
|
HA3
|
J:GLY158
|
3.5
|
27.1
|
1.0
|
|
CA
|
J:GLY158
|
3.5
|
27.1
|
1.0
|
|
CB
|
J:SER14
|
3.5
|
20.0
|
1.0
|
|
C
|
J:GLY156
|
3.6
|
10.6
|
1.0
|
|
H
|
J:GLY156
|
3.6
|
14.5
|
1.0
|
|
H
|
J:SER14
|
3.6
|
22.6
|
1.0
|
|
PB
|
J:ADP401
|
3.7
|
22.7
|
1.0
|
|
CG1
|
J:VAL159
|
3.7
|
32.0
|
1.0
|
|
C
|
J:GLY158
|
3.8
|
23.7
|
1.0
|
|
C
|
J:ASP157
|
3.8
|
21.0
|
1.0
|
|
HG13
|
J:VAL159
|
3.9
|
32.0
|
1.0
|
|
MG
|
J:MG402
|
3.9
|
25.1
|
1.0
|
|
N
|
J:GLY156
|
3.9
|
14.5
|
1.0
|
|
CA
|
J:ASP157
|
4.0
|
15.9
|
1.0
|
|
HB3
|
J:ASP157
|
4.0
|
30.8
|
1.0
|
|
O
|
J:VAL159
|
4.0
|
37.9
|
1.0
|
|
HE22
|
J:GLN137
|
4.0
|
39.9
|
1.0
|
|
O2B
|
J:ADP401
|
4.1
|
22.7
|
1.0
|
|
O3A
|
J:ADP401
|
4.1
|
22.7
|
1.0
|
|
CA
|
J:VAL159
|
4.2
|
15.2
|
1.0
|
|
HA2
|
J:GLY156
|
4.2
|
15.7
|
1.0
|
|
HB3
|
J:SER14
|
4.2
|
20.0
|
1.0
|
|
N
|
J:SER14
|
4.4
|
22.6
|
1.0
|
|
CB
|
J:VAL159
|
4.4
|
20.6
|
1.0
|
|
HG11
|
J:VAL159
|
4.4
|
32.0
|
1.0
|
|
CA
|
J:SER14
|
4.5
|
21.1
|
1.0
|
|
HA2
|
J:GLY158
|
4.6
|
27.1
|
1.0
|
|
HB
|
J:VAL159
|
4.6
|
20.6
|
1.0
|
|
CB
|
J:ASP157
|
4.6
|
30.8
|
1.0
|
|
O
|
J:GLY156
|
4.6
|
26.6
|
1.0
|
|
C
|
J:VAL159
|
4.6
|
25.3
|
1.0
|
|
HB2
|
J:ALA181
|
4.7
|
26.8
|
1.0
|
|
O
|
J:SER14
|
4.7
|
32.0
|
1.0
|
|
O1B
|
J:ADP401
|
4.9
|
22.7
|
1.0
|
|
O
|
J:ASP157
|
4.9
|
32.9
|
1.0
|
|
HB2
|
J:ASP157
|
5.0
|
30.8
|
1.0
|
|
O
|
J:GLY158
|
5.0
|
37.4
|
1.0
|
|
HA
|
J:ASP157
|
5.0
|
15.9
|
1.0
|
|
Fluorine binding site 2 out
of 27 in 8uz1
Go back to
Fluorine Binding Sites List in 8uz1
Fluorine binding site 2 out
of 27 in the Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx)
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:F403
b:23.5
occ:1.00
|
F2
|
J:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
J:BEF403
|
1.5
|
23.5
|
1.0
|
|
MG
|
J:MG402
|
1.9
|
25.1
|
1.0
|
|
HE22
|
J:GLN137
|
2.0
|
39.9
|
1.0
|
|
F3
|
J:BEF403
|
2.4
|
23.5
|
1.0
|
|
O3B
|
J:ADP401
|
2.4
|
22.7
|
1.0
|
|
F1
|
J:BEF403
|
2.4
|
23.5
|
1.0
|
|
NE2
|
J:GLN137
|
2.9
|
39.9
|
1.0
|
|
HG12
|
J:VAL159
|
2.9
|
32.0
|
1.0
|
|
O2B
|
J:ADP401
|
2.9
|
22.7
|
1.0
|
|
OE1
|
J:GLN137
|
3.0
|
45.6
|
1.0
|
|
HA3
|
J:GLY156
|
3.0
|
15.7
|
1.0
|
|
CD
|
J:GLN137
|
3.3
|
36.6
|
1.0
|
|
PB
|
J:ADP401
|
3.3
|
22.7
|
1.0
|
|
HG13
|
J:VAL159
|
3.5
|
32.0
|
1.0
|
|
CG1
|
J:VAL159
|
3.6
|
32.0
|
1.0
|
|
HE21
|
J:GLN137
|
3.6
|
39.9
|
1.0
|
|
HG
|
J:SER14
|
3.8
|
29.0
|
1.0
|
|
H
|
J:SER14
|
3.9
|
22.6
|
1.0
|
|
H
|
J:VAL159
|
3.9
|
5.8
|
1.0
|
|
HG11
|
J:VAL159
|
3.9
|
32.0
|
1.0
|
|
CA
|
J:GLY156
|
4.1
|
15.7
|
1.0
|
|
H
|
J:GLY156
|
4.1
|
14.5
|
1.0
|
|
OD2
|
J:ASP154
|
4.2
|
42.3
|
1.0
|
|
O1B
|
J:ADP401
|
4.2
|
22.7
|
1.0
|
|
H
|
J:GLY158
|
4.3
|
29.3
|
1.0
|
|
H
|
J:ASP157
|
4.3
|
18.2
|
1.0
|
|
N
|
J:GLY156
|
4.4
|
14.5
|
1.0
|
|
HE2
|
J:HIS161
|
4.5
|
29.1
|
1.0
|
|
O3A
|
J:ADP401
|
4.5
|
22.7
|
1.0
|
|
HA3
|
J:GLY13
|
4.5
|
20.7
|
1.0
|
|
HA2
|
J:GLY156
|
4.5
|
15.7
|
1.0
|
|
OD1
|
J:ASP154
|
4.5
|
40.5
|
1.0
|
|
HB2
|
J:SER14
|
4.5
|
20.0
|
1.0
|
|
O
|
J:VAL159
|
4.6
|
37.9
|
1.0
|
|
HB1
|
J:ALA108
|
4.7
|
23.2
|
1.0
|
|
CG
|
J:ASP154
|
4.8
|
35.7
|
1.0
|
|
OG
|
J:SER14
|
4.8
|
29.0
|
1.0
|
|
CG
|
J:GLN137
|
4.8
|
25.2
|
1.0
|
|
HA2
|
J:GLY13
|
4.8
|
20.7
|
1.0
|
|
N
|
J:VAL159
|
4.8
|
5.8
|
1.0
|
|
N
|
J:SER14
|
4.9
|
22.6
|
1.0
|
|
CB
|
J:VAL159
|
5.0
|
20.6
|
1.0
|
|
N
|
J:ASP157
|
5.0
|
18.2
|
1.0
|
|
Fluorine binding site 3 out
of 27 in 8uz1
Go back to
Fluorine Binding Sites List in 8uz1
Fluorine binding site 3 out
of 27 in the Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx)
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:F403
b:23.5
occ:1.00
|
F3
|
J:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
J:BEF403
|
1.5
|
23.5
|
1.0
|
|
HG
|
J:SER14
|
1.7
|
29.0
|
1.0
|
|
H
|
J:SER14
|
1.8
|
22.6
|
1.0
|
|
F2
|
J:BEF403
|
2.4
|
23.5
|
1.0
|
|
F1
|
J:BEF403
|
2.4
|
23.5
|
1.0
|
|
O3B
|
J:ADP401
|
2.4
|
22.7
|
1.0
|
|
OG
|
J:SER14
|
2.6
|
29.0
|
1.0
|
|
HE22
|
J:GLN137
|
2.7
|
39.9
|
1.0
|
|
N
|
J:SER14
|
2.8
|
22.6
|
1.0
|
|
HB2
|
J:SER14
|
2.9
|
20.0
|
1.0
|
|
CB
|
J:SER14
|
3.1
|
20.0
|
1.0
|
|
HG12
|
J:VAL159
|
3.3
|
32.0
|
1.0
|
|
HA2
|
J:GLY13
|
3.3
|
20.7
|
1.0
|
|
CA
|
J:SER14
|
3.5
|
21.1
|
1.0
|
|
HA3
|
J:GLY13
|
3.5
|
20.7
|
1.0
|
|
NE2
|
J:GLN137
|
3.6
|
39.9
|
1.0
|
|
C
|
J:GLY13
|
3.7
|
19.6
|
1.0
|
|
HA2
|
J:GLY74
|
3.7
|
17.5
|
1.0
|
|
CA
|
J:GLY13
|
3.7
|
20.7
|
1.0
|
|
H
|
J:GLY158
|
3.7
|
29.3
|
1.0
|
|
PB
|
J:ADP401
|
3.9
|
22.7
|
1.0
|
|
MG
|
J:MG402
|
3.9
|
25.1
|
1.0
|
|
HE21
|
J:GLN137
|
4.0
|
39.9
|
1.0
|
|
H
|
J:VAL159
|
4.1
|
5.8
|
1.0
|
|
HB3
|
J:SER14
|
4.2
|
20.0
|
1.0
|
|
HA3
|
J:GLY156
|
4.3
|
15.7
|
1.0
|
|
HA
|
J:SER14
|
4.3
|
21.1
|
1.0
|
|
CG1
|
J:VAL159
|
4.3
|
32.0
|
1.0
|
|
H
|
J:ASP157
|
4.3
|
18.2
|
1.0
|
|
O2B
|
J:ADP401
|
4.4
|
22.7
|
1.0
|
|
O1B
|
J:ADP401
|
4.4
|
22.7
|
1.0
|
|
HA3
|
J:GLY158
|
4.4
|
27.1
|
1.0
|
|
O
|
J:SER14
|
4.4
|
32.0
|
1.0
|
|
HG11
|
J:VAL159
|
4.5
|
32.0
|
1.0
|
|
HG23
|
J:ILE71
|
4.5
|
19.9
|
1.0
|
|
C
|
J:SER14
|
4.5
|
24.3
|
1.0
|
|
CA
|
J:GLY74
|
4.5
|
17.5
|
1.0
|
|
HA3
|
J:GLY74
|
4.5
|
17.5
|
1.0
|
|
CD
|
J:GLN137
|
4.6
|
36.6
|
1.0
|
|
N
|
J:GLY158
|
4.6
|
29.3
|
1.0
|
|
OE1
|
J:GLN137
|
4.6
|
45.6
|
1.0
|
|
H
|
J:GLY74
|
4.7
|
29.6
|
1.0
|
|
HG13
|
J:VAL159
|
4.7
|
32.0
|
1.0
|
|
O
|
J:GLY13
|
4.9
|
30.4
|
1.0
|
|
N
|
J:VAL159
|
4.9
|
5.8
|
1.0
|
|
O3A
|
J:ADP401
|
4.9
|
22.7
|
1.0
|
|
N
|
J:GLY74
|
4.9
|
29.6
|
1.0
|
|
HB3
|
J:ASP157
|
5.0
|
30.8
|
1.0
|
|
CA
|
J:GLY158
|
5.0
|
27.1
|
1.0
|
|
Fluorine binding site 4 out
of 27 in 8uz1
Go back to
Fluorine Binding Sites List in 8uz1
Fluorine binding site 4 out
of 27 in the Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx)
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
K:F403
b:23.5
occ:1.00
|
F1
|
K:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
K:BEF403
|
1.5
|
23.5
|
1.0
|
|
H
|
K:GLY158
|
1.8
|
29.3
|
1.0
|
|
H
|
K:VAL159
|
2.3
|
5.8
|
1.0
|
|
F3
|
K:BEF403
|
2.4
|
23.5
|
1.0
|
|
O3B
|
K:ADP401
|
2.4
|
22.7
|
1.0
|
|
F2
|
K:BEF403
|
2.4
|
23.5
|
1.0
|
|
HA3
|
K:GLY156
|
2.4
|
15.7
|
1.0
|
|
HG12
|
K:VAL159
|
2.7
|
32.0
|
1.0
|
|
H
|
K:ASP157
|
2.7
|
18.2
|
1.0
|
|
N
|
K:GLY158
|
2.7
|
29.3
|
1.0
|
|
HB2
|
K:SER14
|
3.0
|
20.0
|
1.0
|
|
HG
|
K:SER14
|
3.0
|
29.0
|
1.0
|
|
N
|
K:VAL159
|
3.2
|
5.8
|
1.0
|
|
N
|
K:ASP157
|
3.2
|
18.2
|
1.0
|
|
HA3
|
K:GLY158
|
3.4
|
27.1
|
1.0
|
|
CA
|
K:GLY156
|
3.4
|
15.7
|
1.0
|
|
CA
|
K:GLY158
|
3.4
|
27.1
|
1.0
|
|
C
|
K:GLY156
|
3.6
|
10.6
|
1.0
|
|
OG
|
K:SER14
|
3.7
|
29.0
|
1.0
|
|
H
|
K:GLY156
|
3.7
|
14.5
|
1.0
|
|
C
|
K:GLY158
|
3.7
|
23.7
|
1.0
|
|
PB
|
K:ADP401
|
3.7
|
22.7
|
1.0
|
|
CG1
|
K:VAL159
|
3.7
|
32.0
|
1.0
|
|
H
|
K:SER14
|
3.7
|
22.6
|
1.0
|
|
C
|
K:ASP157
|
3.7
|
21.0
|
1.0
|
|
CB
|
K:SER14
|
3.8
|
20.0
|
1.0
|
|
HG13
|
K:VAL159
|
3.9
|
32.0
|
1.0
|
|
MG
|
K:MG402
|
3.9
|
25.1
|
1.0
|
|
CA
|
K:ASP157
|
4.0
|
15.9
|
1.0
|
|
HB3
|
K:ASP157
|
4.0
|
30.8
|
1.0
|
|
N
|
K:GLY156
|
4.0
|
14.5
|
1.0
|
|
O2B
|
K:ADP401
|
4.0
|
22.7
|
1.0
|
|
O
|
K:VAL159
|
4.1
|
37.9
|
1.0
|
|
HA2
|
K:GLY156
|
4.2
|
15.7
|
1.0
|
|
O3A
|
K:ADP401
|
4.2
|
22.7
|
1.0
|
|
CA
|
K:VAL159
|
4.3
|
15.2
|
1.0
|
|
HG11
|
K:VAL159
|
4.4
|
32.0
|
1.0
|
|
CB
|
K:VAL159
|
4.5
|
20.6
|
1.0
|
|
HA2
|
K:GLY158
|
4.5
|
27.1
|
1.0
|
|
N
|
K:SER14
|
4.5
|
22.6
|
1.0
|
|
CB
|
K:ASP157
|
4.5
|
30.8
|
1.0
|
|
HB2
|
K:ALA181
|
4.5
|
26.8
|
1.0
|
|
HB3
|
K:SER14
|
4.6
|
20.0
|
1.0
|
|
O
|
K:GLY156
|
4.6
|
26.6
|
1.0
|
|
HB
|
K:VAL159
|
4.6
|
20.6
|
1.0
|
|
C
|
K:VAL159
|
4.7
|
25.3
|
1.0
|
|
CA
|
K:SER14
|
4.7
|
21.1
|
1.0
|
|
O1B
|
K:ADP401
|
4.8
|
22.7
|
1.0
|
|
O
|
K:GLY158
|
4.8
|
37.4
|
1.0
|
|
O
|
K:ASP157
|
4.9
|
32.9
|
1.0
|
|
O
|
K:SER14
|
4.9
|
32.0
|
1.0
|
|
HA
|
K:ASP157
|
4.9
|
15.9
|
1.0
|
|
HB2
|
K:ASP157
|
4.9
|
30.8
|
1.0
|
|
Fluorine binding site 5 out
of 27 in 8uz1
Go back to
Fluorine Binding Sites List in 8uz1
Fluorine binding site 5 out
of 27 in the Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx)
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
K:F403
b:23.5
occ:1.00
|
F2
|
K:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
K:BEF403
|
1.5
|
23.5
|
1.0
|
|
MG
|
K:MG402
|
1.8
|
25.1
|
1.0
|
|
O3B
|
K:ADP401
|
2.4
|
22.7
|
1.0
|
|
F3
|
K:BEF403
|
2.4
|
23.5
|
1.0
|
|
F1
|
K:BEF403
|
2.4
|
23.5
|
1.0
|
|
O2B
|
K:ADP401
|
3.0
|
22.7
|
1.0
|
|
HG12
|
K:VAL159
|
3.0
|
32.0
|
1.0
|
|
HA3
|
K:GLY156
|
3.1
|
15.7
|
1.0
|
|
OE1
|
K:GLN137
|
3.1
|
45.6
|
1.0
|
|
PB
|
K:ADP401
|
3.3
|
22.7
|
1.0
|
|
HG13
|
K:VAL159
|
3.6
|
32.0
|
1.0
|
|
CG1
|
K:VAL159
|
3.7
|
32.0
|
1.0
|
|
CD
|
K:GLN137
|
3.9
|
36.6
|
1.0
|
|
H
|
K:SER14
|
3.9
|
22.6
|
1.0
|
|
HG
|
K:SER14
|
3.9
|
29.0
|
1.0
|
|
HG11
|
K:VAL159
|
4.0
|
32.0
|
1.0
|
|
O1B
|
K:ADP401
|
4.1
|
22.7
|
1.0
|
|
H
|
K:VAL159
|
4.1
|
5.8
|
1.0
|
|
CA
|
K:GLY156
|
4.2
|
15.7
|
1.0
|
|
HA3
|
K:GLY13
|
4.2
|
20.7
|
1.0
|
|
H
|
K:GLY158
|
4.2
|
29.3
|
1.0
|
|
H
|
K:ASP157
|
4.3
|
18.2
|
1.0
|
|
H
|
K:GLY156
|
4.3
|
14.5
|
1.0
|
|
HG3
|
K:GLN137
|
4.3
|
25.2
|
1.0
|
|
OD2
|
K:ASP154
|
4.4
|
42.3
|
1.0
|
|
NE2
|
K:GLN137
|
4.4
|
39.9
|
1.0
|
|
HE22
|
K:GLN137
|
4.5
|
39.9
|
1.0
|
|
O3A
|
K:ADP401
|
4.5
|
22.7
|
1.0
|
|
HE2
|
K:HIS161
|
4.6
|
29.1
|
1.0
|
|
HB1
|
K:ALA108
|
4.6
|
23.2
|
1.0
|
|
HA2
|
K:GLY156
|
4.6
|
15.7
|
1.0
|
|
N
|
K:GLY156
|
4.6
|
14.5
|
1.0
|
|
HB2
|
K:SER14
|
4.7
|
20.0
|
1.0
|
|
CG
|
K:GLN137
|
4.7
|
25.2
|
1.0
|
|
HA2
|
K:GLY13
|
4.7
|
20.7
|
1.0
|
|
N
|
K:SER14
|
4.8
|
22.6
|
1.0
|
|
OG
|
K:SER14
|
4.9
|
29.0
|
1.0
|
|
O
|
K:VAL159
|
4.9
|
37.9
|
1.0
|
|
N
|
K:VAL159
|
4.9
|
5.8
|
1.0
|
|
CA
|
K:GLY13
|
4.9
|
20.7
|
1.0
|
|
N
|
K:ASP157
|
5.0
|
18.2
|
1.0
|
|
Fluorine binding site 6 out
of 27 in 8uz1
Go back to
Fluorine Binding Sites List in 8uz1
Fluorine binding site 6 out
of 27 in the Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx)
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
K:F403
b:23.5
occ:1.00
|
F3
|
K:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
K:BEF403
|
1.5
|
23.5
|
1.0
|
|
HG
|
K:SER14
|
1.7
|
29.0
|
1.0
|
|
H
|
K:SER14
|
1.7
|
22.6
|
1.0
|
|
F1
|
K:BEF403
|
2.4
|
23.5
|
1.0
|
|
F2
|
K:BEF403
|
2.4
|
23.5
|
1.0
|
|
O3B
|
K:ADP401
|
2.4
|
22.7
|
1.0
|
|
OG
|
K:SER14
|
2.6
|
29.0
|
1.0
|
|
N
|
K:SER14
|
2.7
|
22.6
|
1.0
|
|
HB2
|
K:SER14
|
2.9
|
20.0
|
1.0
|
|
CB
|
K:SER14
|
3.1
|
20.0
|
1.0
|
|
HA2
|
K:GLY13
|
3.3
|
20.7
|
1.0
|
|
HA3
|
K:GLY13
|
3.4
|
20.7
|
1.0
|
|
HG12
|
K:VAL159
|
3.5
|
32.0
|
1.0
|
|
CA
|
K:SER14
|
3.5
|
21.1
|
1.0
|
|
H
|
K:GLY158
|
3.6
|
29.3
|
1.0
|
|
C
|
K:GLY13
|
3.6
|
19.6
|
1.0
|
|
CA
|
K:GLY13
|
3.6
|
20.7
|
1.0
|
|
HA2
|
K:GLY74
|
3.7
|
17.5
|
1.0
|
|
MG
|
K:MG402
|
3.8
|
25.1
|
1.0
|
|
PB
|
K:ADP401
|
3.9
|
22.7
|
1.0
|
|
HA3
|
K:GLY158
|
4.1
|
27.1
|
1.0
|
|
HB3
|
K:SER14
|
4.2
|
20.0
|
1.0
|
|
H
|
K:ASP157
|
4.2
|
18.2
|
1.0
|
|
HA
|
K:SER14
|
4.3
|
21.1
|
1.0
|
|
O1B
|
K:ADP401
|
4.3
|
22.7
|
1.0
|
|
HA3
|
K:GLY156
|
4.3
|
15.7
|
1.0
|
|
O2B
|
K:ADP401
|
4.4
|
22.7
|
1.0
|
|
H
|
K:VAL159
|
4.4
|
5.8
|
1.0
|
|
N
|
K:GLY158
|
4.5
|
29.3
|
1.0
|
|
O
|
K:SER14
|
4.5
|
32.0
|
1.0
|
|
CG1
|
K:VAL159
|
4.5
|
32.0
|
1.0
|
|
C
|
K:SER14
|
4.5
|
24.3
|
1.0
|
|
HG23
|
K:ILE71
|
4.6
|
19.9
|
1.0
|
|
CA
|
K:GLY74
|
4.6
|
17.5
|
1.0
|
|
HA3
|
K:GLY74
|
4.6
|
17.5
|
1.0
|
|
HG11
|
K:VAL159
|
4.7
|
32.0
|
1.0
|
|
HB3
|
K:ASP157
|
4.8
|
30.8
|
1.0
|
|
CA
|
K:GLY158
|
4.8
|
27.1
|
1.0
|
|
OE1
|
K:GLN137
|
4.8
|
45.6
|
1.0
|
|
O
|
K:GLY13
|
4.8
|
30.4
|
1.0
|
|
H
|
K:GLY74
|
4.8
|
29.6
|
1.0
|
|
O3A
|
K:ADP401
|
4.9
|
22.7
|
1.0
|
|
HG13
|
K:VAL159
|
4.9
|
32.0
|
1.0
|
|
N
|
K:VAL159
|
5.0
|
5.8
|
1.0
|
|
Fluorine binding site 7 out
of 27 in 8uz1
Go back to
Fluorine Binding Sites List in 8uz1
Fluorine binding site 7 out
of 27 in the Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx)
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:F403
b:23.5
occ:1.00
|
F1
|
L:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
L:BEF403
|
1.5
|
23.5
|
1.0
|
|
H
|
L:GLY158
|
1.8
|
29.3
|
1.0
|
|
H
|
L:VAL159
|
2.1
|
5.8
|
1.0
|
|
F3
|
L:BEF403
|
2.4
|
23.5
|
1.0
|
|
F2
|
L:BEF403
|
2.4
|
23.5
|
1.0
|
|
O3B
|
L:ADP401
|
2.4
|
22.7
|
1.0
|
|
HA3
|
L:GLY156
|
2.5
|
15.7
|
1.0
|
|
N
|
L:GLY158
|
2.7
|
29.3
|
1.0
|
|
HG13
|
L:VAL159
|
2.8
|
32.0
|
1.0
|
|
H
|
L:ASP157
|
2.8
|
18.2
|
1.0
|
|
N
|
L:VAL159
|
3.1
|
5.8
|
1.0
|
|
HG
|
L:SER14
|
3.2
|
29.0
|
1.0
|
|
N
|
L:ASP157
|
3.3
|
18.2
|
1.0
|
|
HA3
|
L:GLY158
|
3.3
|
27.1
|
1.0
|
|
CA
|
L:GLY156
|
3.3
|
15.7
|
1.0
|
|
CA
|
L:GLY158
|
3.4
|
27.1
|
1.0
|
|
HB2
|
L:SER14
|
3.4
|
20.0
|
1.0
|
|
H
|
L:GLY156
|
3.6
|
14.5
|
1.0
|
|
C
|
L:GLY156
|
3.6
|
10.6
|
1.0
|
|
C
|
L:GLY158
|
3.7
|
23.7
|
1.0
|
|
CG1
|
L:VAL159
|
3.7
|
32.0
|
1.0
|
|
C
|
L:ASP157
|
3.8
|
21.0
|
1.0
|
|
PB
|
L:ADP401
|
3.8
|
22.7
|
1.0
|
|
H
|
L:SER14
|
3.9
|
22.6
|
1.0
|
|
HG12
|
L:VAL159
|
3.9
|
32.0
|
1.0
|
|
O
|
L:VAL159
|
3.9
|
37.9
|
1.0
|
|
MG
|
L:MG402
|
3.9
|
25.1
|
1.0
|
|
N
|
L:GLY156
|
3.9
|
14.5
|
1.0
|
|
OG
|
L:SER14
|
4.0
|
29.0
|
1.0
|
|
CA
|
L:ASP157
|
4.0
|
15.9
|
1.0
|
|
HB3
|
L:ASP157
|
4.1
|
30.8
|
1.0
|
|
O2B
|
L:ADP401
|
4.1
|
22.7
|
1.0
|
|
CA
|
L:VAL159
|
4.1
|
15.2
|
1.0
|
|
HA2
|
L:GLY156
|
4.2
|
15.7
|
1.0
|
|
CB
|
L:SER14
|
4.2
|
20.0
|
1.0
|
|
O3A
|
L:ADP401
|
4.4
|
22.7
|
1.0
|
|
HA2
|
L:GLY158
|
4.4
|
27.1
|
1.0
|
|
CB
|
L:VAL159
|
4.4
|
20.6
|
1.0
|
|
HG11
|
L:VAL159
|
4.5
|
32.0
|
1.0
|
|
C
|
L:VAL159
|
4.5
|
25.3
|
1.0
|
|
O
|
L:GLY156
|
4.5
|
26.6
|
1.0
|
|
HB2
|
L:ALA181
|
4.6
|
26.8
|
1.0
|
|
CB
|
L:ASP157
|
4.6
|
30.8
|
1.0
|
|
HB
|
L:VAL159
|
4.7
|
20.6
|
1.0
|
|
N
|
L:SER14
|
4.7
|
22.6
|
1.0
|
|
O1B
|
L:ADP401
|
4.8
|
22.7
|
1.0
|
|
O
|
L:ASP157
|
4.9
|
32.9
|
1.0
|
|
O
|
L:GLY158
|
4.9
|
37.4
|
1.0
|
|
HA
|
L:ASP157
|
5.0
|
15.9
|
1.0
|
|
HB3
|
L:SER14
|
5.0
|
20.0
|
1.0
|
|
Fluorine binding site 8 out
of 27 in 8uz1
Go back to
Fluorine Binding Sites List in 8uz1
Fluorine binding site 8 out
of 27 in the Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx)
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:F403
b:23.5
occ:1.00
|
F2
|
L:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
L:BEF403
|
1.5
|
23.5
|
1.0
|
|
MG
|
L:MG402
|
1.8
|
25.1
|
1.0
|
|
F3
|
L:BEF403
|
2.4
|
23.5
|
1.0
|
|
O3B
|
L:ADP401
|
2.4
|
22.7
|
1.0
|
|
F1
|
L:BEF403
|
2.4
|
23.5
|
1.0
|
|
O2B
|
L:ADP401
|
3.0
|
22.7
|
1.0
|
|
OE1
|
L:GLN137
|
3.0
|
45.6
|
1.0
|
|
HA3
|
L:GLY156
|
3.2
|
15.7
|
1.0
|
|
HG13
|
L:VAL159
|
3.3
|
32.0
|
1.0
|
|
PB
|
L:ADP401
|
3.3
|
22.7
|
1.0
|
|
CD
|
L:GLN137
|
3.7
|
36.6
|
1.0
|
|
H
|
L:SER14
|
3.8
|
22.6
|
1.0
|
|
HG12
|
L:VAL159
|
3.9
|
32.0
|
1.0
|
|
HG
|
L:SER14
|
4.0
|
29.0
|
1.0
|
|
O1B
|
L:ADP401
|
4.0
|
22.7
|
1.0
|
|
H
|
L:VAL159
|
4.1
|
5.8
|
1.0
|
|
CG1
|
L:VAL159
|
4.1
|
32.0
|
1.0
|
|
HA3
|
L:GLY13
|
4.1
|
20.7
|
1.0
|
|
HG3
|
L:GLN137
|
4.1
|
25.2
|
1.0
|
|
H
|
L:GLY158
|
4.2
|
29.3
|
1.0
|
|
CA
|
L:GLY156
|
4.2
|
15.7
|
1.0
|
|
H
|
L:ASP157
|
4.3
|
18.2
|
1.0
|
|
NE2
|
L:GLN137
|
4.3
|
39.9
|
1.0
|
|
HA2
|
L:GLY13
|
4.3
|
20.7
|
1.0
|
|
H
|
L:GLY156
|
4.4
|
14.5
|
1.0
|
|
HE22
|
L:GLN137
|
4.4
|
39.9
|
1.0
|
|
HG11
|
L:VAL159
|
4.4
|
32.0
|
1.0
|
|
CG
|
L:GLN137
|
4.6
|
25.2
|
1.0
|
|
O3A
|
L:ADP401
|
4.6
|
22.7
|
1.0
|
|
HA2
|
L:GLY156
|
4.7
|
15.7
|
1.0
|
|
HE2
|
L:HIS161
|
4.7
|
29.1
|
1.0
|
|
N
|
L:GLY156
|
4.7
|
14.5
|
1.0
|
|
OD2
|
L:ASP154
|
4.7
|
42.3
|
1.0
|
|
HB1
|
L:ALA108
|
4.7
|
23.2
|
1.0
|
|
CA
|
L:GLY13
|
4.7
|
20.7
|
1.0
|
|
N
|
L:SER14
|
4.7
|
22.6
|
1.0
|
|
O
|
L:VAL159
|
4.9
|
37.9
|
1.0
|
|
HB2
|
L:SER14
|
4.9
|
20.0
|
1.0
|
|
OG
|
L:SER14
|
4.9
|
29.0
|
1.0
|
|
N
|
L:ASP157
|
5.0
|
18.2
|
1.0
|
|
N
|
L:VAL159
|
5.0
|
5.8
|
1.0
|
|
Fluorine binding site 9 out
of 27 in 8uz1
Go back to
Fluorine Binding Sites List in 8uz1
Fluorine binding site 9 out
of 27 in the Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx)
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:F403
b:23.5
occ:1.00
|
F3
|
L:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
L:BEF403
|
1.5
|
23.5
|
1.0
|
|
HG
|
L:SER14
|
1.7
|
29.0
|
1.0
|
|
H
|
L:SER14
|
1.7
|
22.6
|
1.0
|
|
F1
|
L:BEF403
|
2.4
|
23.5
|
1.0
|
|
F2
|
L:BEF403
|
2.4
|
23.5
|
1.0
|
|
O3B
|
L:ADP401
|
2.5
|
22.7
|
1.0
|
|
OG
|
L:SER14
|
2.6
|
29.0
|
1.0
|
|
N
|
L:SER14
|
2.7
|
22.6
|
1.0
|
|
HB2
|
L:SER14
|
2.9
|
20.0
|
1.0
|
|
CB
|
L:SER14
|
3.1
|
20.0
|
1.0
|
|
HA2
|
L:GLY13
|
3.3
|
20.7
|
1.0
|
|
H
|
L:GLY158
|
3.4
|
29.3
|
1.0
|
|
CA
|
L:SER14
|
3.5
|
21.1
|
1.0
|
|
HA3
|
L:GLY13
|
3.5
|
20.7
|
1.0
|
|
HG13
|
L:VAL159
|
3.7
|
32.0
|
1.0
|
|
C
|
L:GLY13
|
3.7
|
19.6
|
1.0
|
|
CA
|
L:GLY13
|
3.7
|
20.7
|
1.0
|
|
HA2
|
L:GLY74
|
3.7
|
17.5
|
1.0
|
|
MG
|
L:MG402
|
3.8
|
25.1
|
1.0
|
|
PB
|
L:ADP401
|
3.8
|
22.7
|
1.0
|
|
HA3
|
L:GLY158
|
3.9
|
27.1
|
1.0
|
|
H
|
L:ASP157
|
4.1
|
18.2
|
1.0
|
|
O1B
|
L:ADP401
|
4.1
|
22.7
|
1.0
|
|
H
|
L:VAL159
|
4.1
|
5.8
|
1.0
|
|
HB3
|
L:SER14
|
4.2
|
20.0
|
1.0
|
|
N
|
L:GLY158
|
4.2
|
29.3
|
1.0
|
|
HA3
|
L:GLY156
|
4.2
|
15.7
|
1.0
|
|
O
|
L:SER14
|
4.3
|
32.0
|
1.0
|
|
HA
|
L:SER14
|
4.3
|
21.1
|
1.0
|
|
C
|
L:SER14
|
4.4
|
24.3
|
1.0
|
|
O2B
|
L:ADP401
|
4.4
|
22.7
|
1.0
|
|
HB3
|
L:ASP157
|
4.5
|
30.8
|
1.0
|
|
HG22
|
L:ILE71
|
4.6
|
19.9
|
1.0
|
|
CA
|
L:GLY158
|
4.6
|
27.1
|
1.0
|
|
CA
|
L:GLY74
|
4.6
|
17.5
|
1.0
|
|
HA3
|
L:GLY74
|
4.6
|
17.5
|
1.0
|
|
H
|
L:GLY74
|
4.7
|
29.6
|
1.0
|
|
CG1
|
L:VAL159
|
4.7
|
32.0
|
1.0
|
|
O
|
L:GLY13
|
4.8
|
30.4
|
1.0
|
|
N
|
L:ASP157
|
4.9
|
18.2
|
1.0
|
|
N
|
L:VAL159
|
4.9
|
5.8
|
1.0
|
|
O3A
|
L:ADP401
|
4.9
|
22.7
|
1.0
|
|
OE1
|
L:GLN137
|
4.9
|
45.6
|
1.0
|
|
N
|
L:GLY74
|
4.9
|
29.6
|
1.0
|
|
HG11
|
L:VAL159
|
5.0
|
32.0
|
1.0
|
|
Fluorine binding site 10 out
of 27 in 8uz1
Go back to
Fluorine Binding Sites List in 8uz1
Fluorine binding site 10 out
of 27 in the Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx)
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 10 of Straight Actin Filament From ARP2/3 Branch Junction Sample (Adp-Befx) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
M:F403
b:23.5
occ:1.00
|
F1
|
M:BEF403
|
0.0
|
23.5
|
1.0
|
|
BE
|
M:BEF403
|
1.5
|
23.5
|
1.0
|
|
H
|
M:GLY158
|
1.8
|
29.3
|
1.0
|
|
H
|
M:VAL159
|
2.2
|
5.8
|
1.0
|
|
F3
|
M:BEF403
|
2.4
|
23.5
|
1.0
|
|
O3B
|
M:ADP401
|
2.4
|
22.7
|
1.0
|
|
F2
|
M:BEF403
|
2.4
|
23.5
|
1.0
|
|
HA3
|
M:GLY156
|
2.5
|
15.7
|
1.0
|
|
H
|
M:ASP157
|
2.7
|
18.2
|
1.0
|
|
HG13
|
M:VAL159
|
2.7
|
32.0
|
1.0
|
|
N
|
M:GLY158
|
2.7
|
29.3
|
1.0
|
|
HG
|
M:SER14
|
2.8
|
29.0
|
1.0
|
|
HB2
|
M:SER14
|
2.8
|
20.0
|
1.0
|
|
N
|
M:ASP157
|
3.2
|
18.2
|
1.0
|
|
N
|
M:VAL159
|
3.2
|
5.8
|
1.0
|
|
CA
|
M:GLY156
|
3.3
|
15.7
|
1.0
|
|
HA3
|
M:GLY158
|
3.5
|
27.1
|
1.0
|
|
CA
|
M:GLY158
|
3.5
|
27.1
|
1.0
|
|
OG
|
M:SER14
|
3.5
|
29.0
|
1.0
|
|
C
|
M:GLY156
|
3.5
|
10.6
|
1.0
|
|
H
|
M:GLY156
|
3.6
|
14.5
|
1.0
|
|
CB
|
M:SER14
|
3.7
|
20.0
|
1.0
|
|
H
|
M:SER14
|
3.7
|
22.6
|
1.0
|
|
C
|
M:ASP157
|
3.7
|
21.0
|
1.0
|
|
C
|
M:GLY158
|
3.7
|
23.7
|
1.0
|
|
CG1
|
M:VAL159
|
3.7
|
32.0
|
1.0
|
|
PB
|
M:ADP401
|
3.8
|
22.7
|
1.0
|
|
HB3
|
M:ASP157
|
3.9
|
30.8
|
1.0
|
|
CA
|
M:ASP157
|
3.9
|
15.9
|
1.0
|
|
HE22
|
M:GLN137
|
3.9
|
39.9
|
1.0
|
|
N
|
M:GLY156
|
4.0
|
14.5
|
1.0
|
|
HG12
|
M:VAL159
|
4.0
|
32.0
|
1.0
|
|
MG
|
M:MG402
|
4.0
|
25.1
|
1.0
|
|
O
|
M:VAL159
|
4.0
|
37.9
|
1.0
|
|
HA2
|
M:GLY156
|
4.2
|
15.7
|
1.0
|
|
O2B
|
M:ADP401
|
4.2
|
22.7
|
1.0
|
|
CA
|
M:VAL159
|
4.2
|
15.2
|
1.0
|
|
O3A
|
M:ADP401
|
4.3
|
22.7
|
1.0
|
|
HB3
|
M:SER14
|
4.4
|
20.0
|
1.0
|
|
N
|
M:SER14
|
4.4
|
22.6
|
1.0
|
|
CB
|
M:VAL159
|
4.4
|
20.6
|
1.0
|
|
HG11
|
M:VAL159
|
4.4
|
32.0
|
1.0
|
|
CB
|
M:ASP157
|
4.5
|
30.8
|
1.0
|
|
O
|
M:GLY156
|
4.5
|
26.6
|
1.0
|
|
HA2
|
M:GLY158
|
4.5
|
27.1
|
1.0
|
|
HB3
|
M:ALA181
|
4.6
|
26.8
|
1.0
|
|
CA
|
M:SER14
|
4.6
|
21.1
|
1.0
|
|
HB
|
M:VAL159
|
4.6
|
20.6
|
1.0
|
|
C
|
M:VAL159
|
4.6
|
25.3
|
1.0
|
|
O
|
M:SER14
|
4.7
|
32.0
|
1.0
|
|
O1B
|
M:ADP401
|
4.8
|
22.7
|
1.0
|
|
O
|
M:ASP157
|
4.8
|
32.9
|
1.0
|
|
HB2
|
M:ASP157
|
4.9
|
30.8
|
1.0
|
|
HA
|
M:ASP157
|
4.9
|
15.9
|
1.0
|
|
O
|
M:GLY158
|
4.9
|
37.4
|
1.0
|
|
NE2
|
M:GLN137
|
4.9
|
39.9
|
1.0
|
|
Reference:
S.S.Chavali,
S.Z.Chou,
W.Cao,
T.D.Pollard,
E.M.De La Cruz,
C.V.Sindelar.
High Resolution Cryo-Em Structures Reveal How Phosphate Release From ARP3 Weakens Actin Filament Branches Formed By the ARP2/3 Complex To Be Published.
Page generated: Sat Aug 3 01:13:43 2024
|
