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Fluorine in PDB 8wsw: The Crystal Structure of LIMK2A From Biortus

Enzymatic activity of The Crystal Structure of LIMK2A From Biortus

All present enzymatic activity of The Crystal Structure of LIMK2A From Biortus:
2.7.11.1;

Protein crystallography data

The structure of The Crystal Structure of LIMK2A From Biortus, PDB code: 8wsw was solved by F.Wang, W.Cheng, Z.Yuan, D.Lin, W.Pan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.35 / 2.50
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 88.223, 104.175, 96.443, 90, 116.68, 90
R / Rfree (%) 20.9 / 25.6

Other elements in 8wsw:

The structure of The Crystal Structure of LIMK2A From Biortus also contains other interesting chemical elements:

Chlorine (Cl) 8 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the The Crystal Structure of LIMK2A From Biortus (pdb code 8wsw). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 8 binding sites of Fluorine where determined in the The Crystal Structure of LIMK2A From Biortus, PDB code: 8wsw:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Fluorine binding site 1 out of 8 in 8wsw

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Fluorine binding site 1 out of 8 in the The Crystal Structure of LIMK2A From Biortus


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of The Crystal Structure of LIMK2A From Biortus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F701

b:45.3
occ:1.00
 F1 A:LH0701 0.0 45.3 1.0
C7 A:LH0701 1.4 48.0 1.0
F A:LH0701 2.2 50.9 1.0
C6 A:LH0701 2.3 46.8 1.0
N1 A:LH0701 3.1 46.1 1.0
C8 A:LH0701 3.3 44.2 1.0
CD A:LYS360 3.5 56.2 1.0
CB A:LYS360 3.5 50.7 1.0
CG2 A:THR405 3.8 41.6 1.0
CG A:LYS360 4.1 52.3 1.0
OG1 A:THR405 4.2 42.2 1.0
CG1 A:VAL358 4.2 42.2 1.0
N A:LH0701 4.2 47.6 1.0
OD1 A:ASP469 4.2 49.1 1.0
C9 A:LH0701 4.3 47.0 1.0
CB A:THR405 4.6 42.5 1.0
CB A:LEU403 4.7 56.1 1.0
O A:HOH844 4.8 47.4 1.0
CB A:VAL358 4.8 43.2 1.0
CA A:LYS360 4.8 49.3 1.0
CE A:LYS360 4.8 59.7 1.0
N A:LYS360 5.0 49.7 1.0
CD2 A:LEU403 5.0 60.4 1.0
CG A:ASP469 5.0 48.4 1.0

Fluorine binding site 2 out of 8 in 8wsw

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Fluorine binding site 2 out of 8 in the The Crystal Structure of LIMK2A From Biortus


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of The Crystal Structure of LIMK2A From Biortus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F701

b:50.9
occ:1.00
 F A:LH0701 0.0 50.9 1.0
C7 A:LH0701 1.4 48.0 1.0
F1 A:LH0701 2.2 45.3 1.0
C6 A:LH0701 2.3 46.8 1.0
OD1 A:ASP469 2.8 49.1 1.0
N1 A:LH0701 2.8 46.1 1.0
CA A:ASP469 3.0 39.7 1.0
CB A:ASP469 3.3 44.0 1.0
CG A:ASP469 3.4 48.4 1.0
N A:ASP469 3.5 39.5 1.0
O A:HOH844 3.6 47.4 1.0
C8 A:LH0701 3.6 44.2 1.0
O A:HOH849 3.6 47.5 1.0
O A:HOH839 3.9 45.5 1.0
N A:LH0701 4.1 47.6 1.0
CD A:LYS360 4.2 56.2 1.0
C A:ASP469 4.2 41.6 1.0
CG2 A:THR405 4.3 41.6 1.0
C9 A:LH0701 4.5 47.0 1.0
OD2 A:ASP469 4.5 52.6 1.0
NZ A:LYS360 4.6 62.9 1.0
C A:ALA468 4.8 36.1 1.0
CD2 A:LEU389 4.8 47.0 1.0
N A:PHE470 4.8 41.5 1.0
O A:ASP469 5.0 39.1 1.0

Fluorine binding site 3 out of 8 in 8wsw

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Fluorine binding site 3 out of 8 in the The Crystal Structure of LIMK2A From Biortus


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of The Crystal Structure of LIMK2A From Biortus within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F701

b:54.0
occ:1.00
 F1 B:LH0701 0.0 54.0 1.0
C7 B:LH0701 1.4 51.8 1.0
F B:LH0701 2.2 55.9 1.0
C6 B:LH0701 2.4 49.5 1.0
N1 B:LH0701 3.1 46.1 1.0
C8 B:LH0701 3.3 47.2 1.0
CB B:LYS360 3.6 53.6 1.0
CD B:LYS360 3.6 58.4 1.0
CG2 B:THR405 3.7 49.0 1.0
OG1 B:THR405 4.1 45.4 1.0
CG B:LYS360 4.1 55.6 1.0
CG1 B:VAL358 4.2 57.6 1.0
N B:LH0701 4.3 50.6 1.0
OD1 B:ASP469 4.3 49.7 1.0
C9 B:LH0701 4.4 50.6 1.0
CB B:THR405 4.6 50.8 1.0
CB B:LEU403 4.7 62.0 1.0
CB B:VAL358 4.9 57.0 1.0
CA B:LYS360 4.9 51.2 1.0
CE B:LYS360 4.9 62.3 1.0
CD2 B:LEU403 4.9 68.1 1.0
N B:LYS360 5.0 49.4 1.0

Fluorine binding site 4 out of 8 in 8wsw

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Fluorine binding site 4 out of 8 in the The Crystal Structure of LIMK2A From Biortus


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of The Crystal Structure of LIMK2A From Biortus within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F701

b:55.9
occ:1.00
 F B:LH0701 0.0 55.9 1.0
C7 B:LH0701 1.4 51.8 1.0
F1 B:LH0701 2.2 54.0 1.0
C6 B:LH0701 2.3 49.5 1.0
N1 B:LH0701 2.8 46.1 1.0
CA B:ASP469 3.0 42.7 1.0
OD1 B:ASP469 3.1 49.7 1.0
N B:ASP469 3.4 44.1 1.0
CB B:ASP469 3.4 45.5 1.0
C8 B:LH0701 3.6 47.2 1.0
CG B:ASP469 3.6 48.9 1.0
N B:LH0701 4.1 50.6 1.0
CG2 B:THR405 4.2 49.0 1.0
C B:ASP469 4.3 40.8 1.0
CD B:LYS360 4.4 58.4 1.0
C9 B:LH0701 4.5 50.6 1.0
CD2 B:LEU389 4.5 52.5 1.0
C B:ALA468 4.6 44.9 1.0
OD2 B:ASP469 4.8 53.6 1.0
N B:PHE470 4.8 38.7 1.0
OG1 B:THR405 4.8 45.4 1.0
NZ B:LYS360 4.9 63.3 1.0

Fluorine binding site 5 out of 8 in 8wsw

Go back to Fluorine Binding Sites List in 8wsw
Fluorine binding site 5 out of 8 in the The Crystal Structure of LIMK2A From Biortus


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of The Crystal Structure of LIMK2A From Biortus within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F701

b:53.5
occ:1.00
 F1 C:LH0701 0.0 53.5 1.0
C7 C:LH0701 1.4 49.4 1.0
F C:LH0701 2.2 53.4 1.0
C6 C:LH0701 2.3 50.0 1.0
C8 C:LH0701 3.1 46.5 1.0
O C:HOH846 3.2 42.9 1.0
CG2 C:THR405 3.3 44.5 1.0
N1 C:LH0701 3.4 49.1 1.0
CA C:ASP469 3.4 46.6 1.0
N C:ASP469 3.6 45.1 1.0
OD1 C:ASP469 3.8 51.5 1.0
CD2 C:LEU389 3.9 45.0 1.0
CB C:ASP469 4.0 47.1 1.0
OG1 C:THR405 4.0 44.1 1.0
CB C:THR405 4.2 45.9 1.0
C9 C:LH0701 4.3 45.8 1.0
O C:HOH840 4.3 46.3 1.0
CG C:ASP469 4.3 49.5 1.0
N C:LH0701 4.4 47.4 1.0
C C:ASP469 4.7 46.2 1.0
C C:ALA468 4.8 41.2 1.0

Fluorine binding site 6 out of 8 in 8wsw

Go back to Fluorine Binding Sites List in 8wsw
Fluorine binding site 6 out of 8 in the The Crystal Structure of LIMK2A From Biortus


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of The Crystal Structure of LIMK2A From Biortus within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F701

b:53.4
occ:1.00
 F C:LH0701 0.0 53.4 1.0
C7 C:LH0701 1.4 49.4 1.0
F1 C:LH0701 2.2 53.5 1.0
C6 C:LH0701 2.3 50.0 1.0
C8 C:LH0701 3.1 46.5 1.0
N1 C:LH0701 3.4 49.1 1.0
CB C:LYS360 3.6 50.6 1.0
CG2 C:THR405 3.6 44.5 1.0
CD C:LYS360 3.9 51.0 1.0
OG1 C:THR405 4.0 44.1 1.0
CG1 C:VAL358 4.0 47.4 1.0
C9 C:LH0701 4.3 45.8 1.0
CG C:LYS360 4.3 50.4 1.0
N C:LH0701 4.4 47.4 1.0
OD1 C:ASP469 4.4 51.5 1.0
CB C:THR405 4.4 45.9 1.0
CB C:LEU403 4.6 51.3 1.0
CB C:VAL358 4.6 48.9 1.0
N C:LYS360 4.8 48.8 1.0
CA C:LYS360 4.8 51.9 1.0
CD2 C:LEU403 4.9 57.7 1.0
O C:LEU403 5.0 48.7 1.0
O C:HOH834 5.0 41.8 1.0
O C:VAL358 5.0 46.9 1.0

Fluorine binding site 7 out of 8 in 8wsw

Go back to Fluorine Binding Sites List in 8wsw
Fluorine binding site 7 out of 8 in the The Crystal Structure of LIMK2A From Biortus


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 7 of The Crystal Structure of LIMK2A From Biortus within 5.0Å range:
probe atom residue distance (Å) B Occ
D:F701

b:58.2
occ:1.00
 F1 D:LH0701 0.0 58.2 1.0
C7 D:LH0701 1.4 56.5 1.0
F D:LH0701 2.2 59.9 1.0
C6 D:LH0701 2.4 53.0 1.0
O D:HOH840 3.0 46.7 1.0
N1 D:LH0701 3.2 48.6 1.0
C8 D:LH0701 3.3 49.0 1.0
CG2 D:THR405 3.4 47.4 1.0
CA D:ASP469 3.4 50.4 1.0
N D:ASP469 3.5 49.2 1.0
CD2 D:LEU389 3.9 55.3 1.0
OD1 D:ASP469 3.9 62.8 1.0
CB D:ASP469 4.0 54.8 1.0
OG1 D:THR405 4.1 51.2 1.0
CB D:THR405 4.2 50.3 1.0
N D:LH0701 4.3 53.1 1.0
CG D:ASP469 4.4 61.2 1.0
C9 D:LH0701 4.4 49.6 1.0
C D:ASP469 4.7 48.4 1.0
O D:HOH839 4.7 68.5 1.0
C D:ALA468 4.7 46.1 1.0

Fluorine binding site 8 out of 8 in 8wsw

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Fluorine binding site 8 out of 8 in the The Crystal Structure of LIMK2A From Biortus


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 8 of The Crystal Structure of LIMK2A From Biortus within 5.0Å range:
probe atom residue distance (Å) B Occ
D:F701

b:59.9
occ:1.00
 F D:LH0701 0.0 59.9 1.0
C7 D:LH0701 1.4 56.5 1.0
F1 D:LH0701 2.2 58.2 1.0
C6 D:LH0701 2.3 53.0 1.0
N1 D:LH0701 2.8 48.6 1.0
CD D:LYS360 3.1 64.4 1.0
OD1 D:ASP469 3.3 62.8 1.0
C8 D:LH0701 3.6 49.0 1.0
CB D:LYS360 3.7 59.8 1.0
CG D:LYS360 3.9 60.5 1.0
N D:LH0701 4.1 53.1 1.0
CG D:ASP469 4.1 61.2 1.0
CE D:LYS360 4.2 73.2 1.0
NZ D:LYS360 4.3 75.8 1.0
CB D:ASP469 4.4 54.8 1.0
CA D:ASP469 4.4 50.4 1.0
O D:HOH839 4.5 68.5 1.0
CG2 D:THR405 4.5 47.4 1.0
C9 D:LH0701 4.5 49.6 1.0
CG1 D:VAL358 4.8 54.6 1.0
CD2 D:LEU403 4.9 63.6 1.0
O D:HOH840 5.0 46.7 1.0
OG1 D:THR405 5.0 51.2 1.0

Reference:

F.Wang, W.Cheng, Z.Yuan, D.Lin, W.Pan. The Crystal Structure of LIMK2A From Biortus. To Be Published.
Page generated: Thu Dec 28 05:19:11 2023

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