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Fluorine in PDB 7uyt: Crystal Structure of TYK2 Kinase Domain in Complex with Compound 25

Enzymatic activity of Crystal Structure of TYK2 Kinase Domain in Complex with Compound 25

All present enzymatic activity of Crystal Structure of TYK2 Kinase Domain in Complex with Compound 25:
2.7.10.2;

Protein crystallography data

The structure of Crystal Structure of TYK2 Kinase Domain in Complex with Compound 25, PDB code: 7uyt was solved by A.V.Toms, S.Leit, J.R.Greenwood, S.Mondal, S.Carriero, M.Dahlgren, G.C.Harriman, J.J.Kennedy-Smith, R.Kapeller, J.P.Lawson, D.L.Romero, M.Shelley, R.T.Wester, W.Westlin, J.J.Mc Elwee, W.Miao, S.D.Edmondson, C.E.Massee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.76 / 2.14
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 35.975, 73.829, 104.771, 90, 90, 90
R / Rfree (%) 23.9 / 29.3

Other elements in 7uyt:

The structure of Crystal Structure of TYK2 Kinase Domain in Complex with Compound 25 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of TYK2 Kinase Domain in Complex with Compound 25 (pdb code 7uyt). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of TYK2 Kinase Domain in Complex with Compound 25, PDB code: 7uyt:

Fluorine binding site 1 out of 1 in 7uyt

Go back to Fluorine Binding Sites List in 7uyt
Fluorine binding site 1 out of 1 in the Crystal Structure of TYK2 Kinase Domain in Complex with Compound 25


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of TYK2 Kinase Domain in Complex with Compound 25 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1201

b:38.2
occ:1.00
 F25 A:OV51201 0.0 38.2 1.0
C24 A:OV51201 1.4 41.2 1.0
C26 A:OV51201 2.4 42.4 1.0
C23 A:OV51201 2.4 40.0 1.0
C15 A:OV51201 2.9 36.9 1.0
C14 A:OV51201 3.2 36.8 1.0
N A:GLY904 3.3 42.0 1.0
O A:HOH1319 3.4 34.5 1.0
CA A:GLY904 3.4 43.5 1.0
CB A:VAL911 3.4 39.8 1.0
C A:LEU903 3.6 41.3 1.0
C27 A:OV51201 3.6 41.1 1.0
C29 A:OV51201 3.7 41.0 1.0
C A:GLY904 3.7 45.0 1.0
CG1 A:VAL911 3.8 39.2 1.0
CG2 A:VAL911 3.8 39.5 1.0
N16 A:OV51201 3.9 36.3 1.0
O A:LEU903 4.0 41.6 1.0
CB A:LEU903 4.0 40.0 1.0
O A:GLY904 4.0 44.6 1.0
C28 A:OV51201 4.1 42.1 1.0
N10 A:OV51201 4.3 38.7 1.0
N A:GLU905 4.3 47.4 1.0
C13 A:OV51201 4.3 37.3 1.0
CA A:LEU903 4.4 41.4 1.0
CA A:VAL911 4.7 41.2 1.0
O A:VAL911 4.7 41.0 1.0
C17 A:OV51201 4.8 37.4 1.0
C22 A:OV51201 5.0 37.3 1.0
O A:HOH1303 5.0 26.7 1.0

Reference:

S.Leit, J.R.Greenwood, S.Mondal, S.Carriero, M.Dahlgren, G.C.Harriman, J.J.Kennedy-Smith, R.Kapeller, J.P.Lawson, D.L.Romero, A.V.Toms, M.Shelley, R.T.Wester, W.Westlin, J.J.Mcelwee, W.Miao, S.D.Edmondson, C.E.Masse. Potent and Selective TYK2-JH1 Inhibitors Highly Efficacious in Rodent Model of Psoriasis. Bioorg.Med.Chem.Lett. V. 73 28891 2022.
ISSN: ESSN 1464-3405
PubMed: 35842205
DOI: 10.1016/J.BMCL.2022.128891
Page generated: Wed Jul 16 01:07:54 2025

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