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Fluorine in PDB 8s14: C-Kit Kinase Domain in Complex with Sunitinib

Enzymatic activity of C-Kit Kinase Domain in Complex with Sunitinib

All present enzymatic activity of C-Kit Kinase Domain in Complex with Sunitinib:
2.7.10.1;

Protein crystallography data

The structure of C-Kit Kinase Domain in Complex with Sunitinib, PDB code: 8s14 was solved by A.Teuber, J.Niggenaber, I.Landel, M.P.Mueller, D.Rauh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.42 / 1.50
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 97.77, 69.82, 55.93, 90, 117, 90
R / Rfree (%) 18.8 / 21.4

Other elements in 8s14:

The structure of C-Kit Kinase Domain in Complex with Sunitinib also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the C-Kit Kinase Domain in Complex with Sunitinib (pdb code 8s14). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the C-Kit Kinase Domain in Complex with Sunitinib, PDB code: 8s14:

Fluorine binding site 1 out of 1 in 8s14

Go back to Fluorine Binding Sites List in 8s14
Fluorine binding site 1 out of 1 in the C-Kit Kinase Domain in Complex with Sunitinib


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of C-Kit Kinase Domain in Complex with Sunitinib within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1001

b:56.0
occ:1.00
F29 A:B491001 0.0 56.0 1.0
C15 A:B491001 1.4 52.1 1.0
C5 A:B491001 2.4 44.6 1.0
C7 A:B491001 2.4 44.9 1.0
CA A:PHE811 3.5 42.8 1.0
CE A:LYS623 3.5 49.3 1.0
NZ A:LYS623 3.6 52.1 1.0
SG A:CYS809 3.7 39.1 0.6
C17 A:B491001 3.7 39.2 1.0
C6 A:B491001 3.7 40.3 1.0
CD2 A:PHE811 3.7 59.3 1.0
O A:PHE811 3.8 49.0 1.0
CG A:PHE811 3.9 44.1 1.0
O A:ASP810 4.0 46.9 1.0
C A:PHE811 4.1 44.0 1.0
CB A:ALA814 4.1 60.9 1.0
CB A:PHE811 4.1 50.6 1.0
C16 A:B491001 4.2 37.5 1.0
CD A:LYS623 4.2 51.6 1.0
CE2 A:PHE811 4.2 50.5 1.0
N A:PHE811 4.3 44.9 1.0
CG1 A:VAL603 4.4 48.1 1.0
C A:ASP810 4.4 39.4 1.0
O A:HOH1266 4.5 56.2 1.0
CD1 A:PHE811 4.5 44.4 1.0
CB A:VAL603 4.5 45.9 1.0
CG A:LYS623 4.7 54.7 1.0
CG2 A:VAL603 4.7 43.0 1.0
CZ A:PHE811 4.8 53.0 1.0
CE1 A:PHE811 4.9 46.4 1.0

Reference:

A.Teuber, J.Niggenaber, S.B.Kleinboelting, I.Landel, J.Warmuth, D.Busick, M.P.Mueller, S.Bauer, D.Rauh. C-Kit Kinase Domain in Complex with Sunitinib To Be Published.
Page generated: Sat Dec 13 15:39:27 2025

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