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Fluorine in PDB 9es4: Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex

Enzymatic activity of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex

All present enzymatic activity of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex:
3.6.4.9;

Other elements in 9es4:

The structure of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex also contains other interesting chemical elements:

Potassium (K) 14 atoms
Magnesium (Mg) 14 atoms

Fluorine Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 42;

Binding sites:

The binding sites of Fluorine atom in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex (pdb code 9es4). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 42 binding sites of Fluorine where determined in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex, PDB code: 9es4:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Fluorine binding site 1 out of 42 in 9es4

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Fluorine binding site 1 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F602

b:40.5
occ:1.00
F1 A:BEF602 0.0 40.5 1.0
BE A:BEF602 1.5 26.7 1.0
MG A:MG603 2.0 15.4 1.0
O1B A:ADP601 2.2 15.1 1.0
OD1 A:ASP87 2.5 47.9 1.0
F3 A:BEF602 2.5 37.9 1.0
F2 A:BEF602 2.6 22.4 1.0
O2A A:ADP601 3.0 29.6 1.0
OD2 A:ASP399 3.3 40.3 1.0
PB A:ADP601 3.3 25.8 1.0
O3B A:ADP601 3.4 22.4 1.0
CG A:ASP87 3.6 38.9 1.0
PA A:ADP601 3.9 18.0 1.0
CG A:ASP399 3.9 41.9 1.0
OD2 A:ASP87 4.0 39.3 1.0
O3A A:ADP601 4.0 26.9 1.0
N A:GLY88 4.2 17.9 1.0
K A:K604 4.4 21.6 1.0
O1A A:ADP601 4.5 24.1 1.0
OD1 A:ASP52 4.5 42.9 1.0
OD1 A:ASP399 4.5 40.7 1.0
O2B A:ADP601 4.6 37.6 1.0
CB A:ASP399 4.6 32.3 1.0
CB A:ASP87 4.8 22.6 1.0
CA A:ASP87 4.8 18.0 1.0
OG1 A:THR89 4.8 33.1 1.0

Fluorine binding site 2 out of 42 in 9es4

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Fluorine binding site 2 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F602

b:22.4
occ:1.00
F2 A:BEF602 0.0 22.4 1.0
BE A:BEF602 1.6 26.7 1.0
O1B A:ADP601 2.2 15.1 1.0
F3 A:BEF602 2.5 37.9 1.0
F1 A:BEF602 2.6 40.5 1.0
K A:K604 3.0 21.6 1.0
N A:GLY53 3.0 11.9 1.0
OG1 A:THR89 3.1 33.1 1.0
OG1 A:THR90 3.3 20.6 1.0
PB A:ADP601 3.7 25.8 1.0
OD1 A:ASP52 3.9 42.9 1.0
CA A:GLY53 3.9 11.7 1.0
CA A:ASP52 3.9 14.3 1.0
C A:ASP52 3.9 19.9 1.0
N A:THR90 4.1 14.1 1.0
O A:LYS51 4.1 31.5 1.0
O3A A:ADP601 4.2 26.9 1.0
CG A:ASP52 4.3 39.4 1.0
OD2 A:ASP399 4.4 40.3 1.0
CB A:THR90 4.4 13.0 1.0
O2B A:ADP601 4.4 37.6 1.0
N A:THR89 4.4 28.3 1.0
CB A:THR89 4.4 19.2 1.0
O2A A:ADP601 4.5 29.6 1.0
O1A A:ADP601 4.5 24.1 1.0
MG A:MG603 4.5 15.4 1.0
OD1 A:ASP87 4.6 47.9 1.0
PA A:ADP601 4.6 18.0 1.0
O3B A:ADP601 4.7 22.4 1.0
CB A:ASP52 4.8 20.7 1.0
CA A:THR89 4.8 14.9 1.0
CA A:THR90 4.9 16.3 1.0
C A:THR89 4.9 18.8 1.0
N A:ASP52 4.9 26.6 1.0
C A:LYS51 5.0 23.0 1.0
OD2 A:ASP52 5.0 38.8 1.0

Fluorine binding site 3 out of 42 in 9es4

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Fluorine binding site 3 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F602

b:37.9
occ:1.00
F3 A:BEF602 0.0 37.9 1.0
BE A:BEF602 1.5 26.7 1.0
F2 A:BEF602 2.5 22.4 1.0
F1 A:BEF602 2.5 40.5 1.0
OD1 A:ASP52 2.7 42.9 1.0
OD2 A:ASP399 2.7 40.3 1.0
OD1 A:ASP87 3.2 47.9 1.0
OD1 A:ASP399 3.2 40.7 1.0
CG A:ASP399 3.3 41.9 1.0
OG1 A:THR89 3.5 33.1 1.0
CG A:ASP52 3.5 39.4 1.0
O1B A:ADP601 3.6 15.1 1.0
OD2 A:ASP52 3.9 38.8 1.0
MG A:MG603 4.2 15.4 1.0
CA A:ASP87 4.3 18.0 1.0
CG A:ASP87 4.4 38.9 1.0
N A:GLY53 4.4 11.9 1.0
N A:GLY88 4.5 17.9 1.0
CA A:ASP52 4.6 14.3 1.0
CB A:ASP399 4.6 32.3 1.0
CB A:THR89 4.6 19.2 1.0
CB A:ASP52 4.6 20.7 1.0
N A:THR89 4.6 28.3 1.0
CG2 A:THR89 4.7 13.4 1.0
O A:GLY86 4.7 33.1 1.0
C A:ASP87 4.8 25.6 1.0
CB A:ASP87 4.9 22.6 1.0
PB A:ADP601 5.0 25.8 1.0

Fluorine binding site 4 out of 42 in 9es4

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Fluorine binding site 4 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F602

b:43.7
occ:1.00
F1 B:BEF602 0.0 43.7 1.0
BE B:BEF602 1.5 29.6 1.0
MG B:MG603 2.1 12.0 1.0
O1B B:ADP601 2.2 19.4 1.0
OD1 B:ASP87 2.5 41.9 1.0
F3 B:BEF602 2.5 40.0 1.0
F2 B:BEF602 2.6 20.5 1.0
O2A B:ADP601 3.1 22.5 1.0
OD2 B:ASP399 3.2 44.5 1.0
PB B:ADP601 3.3 25.5 1.0
O3B B:ADP601 3.5 19.8 1.0
CG B:ASP87 3.6 37.9 1.0
CG B:ASP399 3.9 46.0 1.0
PA B:ADP601 4.0 18.8 1.0
O3A B:ADP601 4.1 28.6 1.0
N B:GLY88 4.1 19.0 1.0
OD2 B:ASP87 4.1 40.1 1.0
OD1 B:ASP52 4.4 43.7 1.0
K B:K604 4.4 31.0 1.0
OD1 B:ASP399 4.4 43.7 1.0
O1A B:ADP601 4.6 26.9 1.0
O2B B:ADP601 4.6 37.5 1.0
CB B:ASP399 4.7 35.3 1.0
CA B:ASP87 4.7 21.1 1.0
CB B:ASP87 4.8 24.1 1.0
OG1 B:THR89 4.8 27.4 1.0
C B:ASP87 4.9 27.2 1.0
CA B:GLY88 5.0 15.7 1.0
N B:THR89 5.0 28.8 1.0

Fluorine binding site 5 out of 42 in 9es4

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Fluorine binding site 5 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F602

b:20.5
occ:1.00
F2 B:BEF602 0.0 20.5 1.0
BE B:BEF602 1.6 29.6 1.0
O1B B:ADP601 2.2 19.4 1.0
F3 B:BEF602 2.5 40.0 1.0
F1 B:BEF602 2.6 43.7 1.0
N B:GLY53 3.0 14.9 1.0
OG1 B:THR89 3.1 27.4 1.0
K B:K604 3.1 31.0 1.0
OG1 B:THR90 3.2 19.4 1.0
PB B:ADP601 3.7 25.5 1.0
CA B:GLY53 3.8 6.7 1.0
OD1 B:ASP52 3.9 43.7 1.0
CA B:ASP52 3.9 14.7 1.0
C B:ASP52 3.9 22.2 1.0
N B:THR90 4.0 10.6 1.0
O3A B:ADP601 4.2 28.6 1.0
O B:LYS51 4.2 31.4 1.0
CB B:THR90 4.3 9.8 1.0
CG B:ASP52 4.3 40.8 1.0
N B:THR89 4.4 28.8 1.0
O2B B:ADP601 4.4 37.5 1.0
CB B:THR89 4.5 17.7 1.0
OD2 B:ASP399 4.5 44.5 1.0
O2A B:ADP601 4.6 22.5 1.0
MG B:MG603 4.6 12.0 1.0
PA B:ADP601 4.7 18.8 1.0
OD1 B:ASP87 4.7 41.9 1.0
O1A B:ADP601 4.7 26.9 1.0
O3B B:ADP601 4.7 19.8 1.0
CB B:ASP52 4.7 20.3 1.0
CA B:THR90 4.8 13.2 1.0
CA B:THR89 4.8 17.1 1.0
C B:THR89 4.8 16.1 1.0
N B:VAL54 4.9 25.3 1.0
C B:GLY53 4.9 18.1 1.0
OD2 B:ASP52 4.9 40.4 1.0
N B:ASP52 4.9 27.3 1.0

Fluorine binding site 6 out of 42 in 9es4

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Fluorine binding site 6 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F602

b:40.0
occ:1.00
F3 B:BEF602 0.0 40.0 1.0
BE B:BEF602 1.5 29.6 1.0
F2 B:BEF602 2.5 20.5 1.0
F1 B:BEF602 2.5 43.7 1.0
OD1 B:ASP52 2.7 43.7 1.0
OD2 B:ASP399 2.9 44.5 1.0
OD1 B:ASP399 3.3 43.7 1.0
OD1 B:ASP87 3.3 41.9 1.0
OG1 B:THR89 3.4 27.4 1.0
CG B:ASP399 3.4 46.0 1.0
CG B:ASP52 3.5 40.8 1.0
O1B B:ADP601 3.6 19.4 1.0
OD2 B:ASP52 3.8 40.4 1.0
CA B:ASP87 4.3 21.1 1.0
N B:GLY53 4.3 14.9 1.0
MG B:MG603 4.4 12.0 1.0
N B:GLY88 4.5 19.0 1.0
CG B:ASP87 4.5 37.9 1.0
CB B:THR89 4.6 17.7 1.0
N B:THR89 4.6 28.8 1.0
CA B:ASP52 4.6 14.7 1.0
CG2 B:THR89 4.6 15.7 1.0
CB B:ASP52 4.6 20.3 1.0
O B:GLY86 4.7 35.4 1.0
C B:ASP87 4.8 27.2 1.0
CB B:ASP399 4.8 35.3 1.0
C B:ASP52 5.0 22.2 1.0
PB B:ADP601 5.0 25.5 1.0
CB B:ASP87 5.0 24.1 1.0

Fluorine binding site 7 out of 42 in 9es4

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Fluorine binding site 7 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 7 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F602

b:40.8
occ:1.00
F1 C:BEF602 0.0 40.8 1.0
BE C:BEF602 1.5 30.5 1.0
MG C:MG603 2.1 19.4 1.0
O1B C:ADP601 2.3 21.4 1.0
OD1 C:ASP87 2.5 45.8 1.0
F3 C:BEF602 2.5 43.1 1.0
F2 C:BEF602 2.6 19.7 1.0
O2A C:ADP601 3.0 33.8 1.0
OD2 C:ASP399 3.2 41.7 1.0
PB C:ADP601 3.4 23.0 1.0
O3B C:ADP601 3.5 33.7 1.0
CG C:ASP87 3.6 37.5 1.0
CG C:ASP399 3.9 45.2 1.0
PA C:ADP601 4.0 15.7 1.0
OD2 C:ASP87 4.1 38.7 1.0
O3A C:ADP601 4.1 32.6 1.0
N C:GLY88 4.2 18.0 1.0
K C:K604 4.4 30.9 1.0
OD1 C:ASP52 4.5 43.0 1.0
OD1 C:ASP399 4.5 43.0 1.0
O1A C:ADP601 4.5 31.6 1.0
CB C:ASP399 4.6 33.1 1.0
O2B C:ADP601 4.7 41.5 1.0
CA C:ASP87 4.7 19.4 1.0
CB C:ASP87 4.7 21.9 1.0
OG1 C:THR89 4.8 35.2 1.0
N C:THR89 5.0 31.7 1.0
CA C:GLY88 5.0 18.8 1.0
C C:ASP87 5.0 25.9 1.0

Fluorine binding site 8 out of 42 in 9es4

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Fluorine binding site 8 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 8 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F602

b:19.7
occ:1.00
F2 C:BEF602 0.0 19.7 1.0
BE C:BEF602 1.6 30.5 1.0
O1B C:ADP601 2.2 21.4 1.0
F3 C:BEF602 2.5 43.1 1.0
F1 C:BEF602 2.6 40.8 1.0
OG1 C:THR89 3.0 35.2 1.0
K C:K604 3.0 30.9 1.0
N C:GLY53 3.1 18.0 1.0
OG1 C:THR90 3.3 21.3 1.0
PB C:ADP601 3.6 23.0 1.0
CA C:GLY53 3.9 11.8 1.0
OD1 C:ASP52 3.9 43.0 1.0
CA C:ASP52 3.9 13.5 1.0
C C:ASP52 4.0 23.6 1.0
N C:THR90 4.0 15.8 1.0
O C:LYS51 4.1 31.5 1.0
O3A C:ADP601 4.2 32.6 1.0
N C:THR89 4.3 31.7 1.0
CB C:THR89 4.3 21.3 1.0
CB C:THR90 4.3 17.0 1.0
O2B C:ADP601 4.4 41.5 1.0
CG C:ASP52 4.4 40.0 1.0
OD2 C:ASP399 4.4 41.7 1.0
O2A C:ADP601 4.5 33.8 1.0
O1A C:ADP601 4.5 31.6 1.0
PA C:ADP601 4.6 15.7 1.0
OD1 C:ASP87 4.6 45.8 1.0
MG C:MG603 4.6 19.4 1.0
O3B C:ADP601 4.6 33.7 1.0
CA C:THR89 4.7 17.5 1.0
CB C:ASP52 4.8 18.9 1.0
CA C:THR90 4.8 15.3 1.0
C C:THR89 4.8 18.5 1.0
N C:ASP52 4.9 23.6 1.0
C C:LYS51 5.0 21.4 1.0

Fluorine binding site 9 out of 42 in 9es4

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Fluorine binding site 9 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 9 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F602

b:43.1
occ:1.00
F3 C:BEF602 0.0 43.1 1.0
BE C:BEF602 1.5 30.5 1.0
F2 C:BEF602 2.5 19.7 1.0
F1 C:BEF602 2.5 40.8 1.0
OD1 C:ASP52 2.8 43.0 1.0
OD2 C:ASP399 2.9 41.7 1.0
OD1 C:ASP87 3.2 45.8 1.0
OG1 C:THR89 3.3 35.2 1.0
OD1 C:ASP399 3.3 43.0 1.0
CG C:ASP399 3.4 45.2 1.0
O1B C:ADP601 3.6 21.4 1.0
CG C:ASP52 3.6 40.0 1.0
OD2 C:ASP52 3.9 40.6 1.0
CA C:ASP87 4.2 19.4 1.0
CG C:ASP87 4.4 37.5 1.0
N C:GLY53 4.4 18.0 1.0
N C:GLY88 4.4 18.0 1.0
MG C:MG603 4.4 19.4 1.0
CB C:THR89 4.4 21.3 1.0
CG2 C:THR89 4.5 16.8 1.0
N C:THR89 4.5 31.7 1.0
CA C:ASP52 4.6 13.5 1.0
CB C:ASP52 4.7 18.9 1.0
O C:GLY86 4.7 35.4 1.0
C C:ASP87 4.7 25.9 1.0
CB C:ASP399 4.7 33.1 1.0
CB C:ASP87 4.9 21.9 1.0
PB C:ADP601 4.9 23.0 1.0

Fluorine binding site 10 out of 42 in 9es4

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Fluorine binding site 10 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 10 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:F602

b:41.6
occ:1.00
F1 D:BEF602 0.0 41.6 1.0
BE D:BEF602 1.5 29.9 1.0
MG D:MG603 2.2 11.7 1.0
O1B D:ADP601 2.3 20.4 1.0
OD1 D:ASP87 2.5 41.3 1.0
F3 D:BEF602 2.5 41.8 1.0
F2 D:BEF602 2.6 24.4 1.0
O2A D:ADP601 3.1 29.2 1.0
OD2 D:ASP399 3.2 40.9 1.0
PB D:ADP601 3.4 22.8 1.0
O3B D:ADP601 3.5 23.6 1.0
CG D:ASP87 3.6 37.6 1.0
CG D:ASP399 3.9 44.4 1.0
PA D:ADP601 4.0 16.3 1.0
O3A D:ADP601 4.1 26.8 1.0
OD2 D:ASP87 4.1 40.1 1.0
N D:GLY88 4.2 18.2 1.0
K D:K604 4.4 32.1 1.0
OD1 D:ASP52 4.4 43.7 1.0
OD1 D:ASP399 4.4 40.5 1.0
O1A D:ADP601 4.5 20.8 1.0
CB D:ASP399 4.6 35.7 1.0
O2B D:ADP601 4.7 38.9 1.0
CA D:ASP87 4.7 19.9 1.0
CB D:ASP87 4.7 25.7 1.0
OG1 D:THR89 4.8 33.1 1.0

Reference:

I.Tascon, J.P.Lopez-Alonso, I.Ubarretxena-Belandia, J.Vilchez, Y.Shkolnisky, A.Azem, J.Hirsch. Structural Basis For Atp-Triggered Assembly of Human Mitochondrial HSP60-HSP10 Chaperonin To Be Published.
Page generated: Wed Jul 16 11:09:47 2025

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