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Fluorine in PDB 1o35: Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors

Enzymatic activity of Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors

All present enzymatic activity of Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors:
3.4.21.4;

Protein crystallography data

The structure of Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors, PDB code: 1o35 was solved by B.A.Katz, K.Elrod, E.Verner, R.L.Mackman, C.Luong, W.D.Shrader, M.Sendzik, J.R.Spencer, P.A.Sprengeler, A.Kolesnikov, V.W.Tai, H.C.Hui, J.G.Breitenbucher, D.Allen, J.W.Janc, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 7.00 / 1.41
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 63.720, 63.460, 69.290, 90.00, 90.00, 90.00
R / Rfree (%) 16.4 / 19.8

Other elements in 1o35:

The structure of Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors (pdb code 1o35). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors, PDB code: 1o35:

Fluorine binding site 1 out of 1 in 1o35

Go back to Fluorine Binding Sites List in 1o35
Fluorine binding site 1 out of 1 in the Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F246

b:30.6
occ:1.00
 F3' A:802246 0.0 30.6 1.0
C3' A:802246 1.4 27.3 1.0
C4' A:802246 2.4 27.6 1.0
C2' A:802246 2.4 26.3 1.0
HC4' A:802246 2.6 27.4 1.0
HC2' A:802246 2.7 26.1 1.0
H2 A:HOH688 2.8 62.1 1.0
H1 A:HOH691 3.1 57.1 1.0
H1 A:HOH688 3.2 61.9 1.0
OE1 A:GLN192 3.3 23.4 0.6
O A:HOH688 3.4 64.3 1.0
CD A:GLN192 3.5 21.7 0.6
HE21 A:GLN192 3.6 22.0 0.6
NE2 A:GLN192 3.6 21.8 0.6
C5' A:802246 3.7 25.8 1.0
C1' A:802246 3.7 24.8 1.0
O A:HOH691 4.0 58.2 1.0
HG3 A:GLN192 4.0 19.5 0.6
C6' A:802246 4.2 24.4 1.0
HE22 A:GLN192 4.2 21.8 0.6
H2 A:HOH691 4.3 56.9 1.0
CG A:GLN192 4.3 19.8 0.6
H1 A:HOH707 4.4 56.1 1.0
HC5' A:802246 4.5 26.1 1.0
HB2 A:GLN192 4.6 17.7 1.0
C8 A:802246 4.9 23.2 1.0
O A:HOH684 5.0 60.7 1.0
H2 A:HOH947 5.0 53.2 1.0

Reference:

B.A.Katz, K.Elrod, E.Verner, R.L.Mackman, C.Luong, W.D.Shrader, M.Sendzik, J.R.Spencer, P.A.Sprengeler, A.Kolesnikov, V.W.Tai, H.C.Hui, J.G.Breitenbucher, D.Allen, J.W.Janc. Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors. J.Mol.Biol. V. 329 93 2003.
ISSN: ISSN 0022-2836
PubMed: 12742021
DOI: 10.1016/S0022-2836(03)00399-1
Page generated: Mon Jul 14 11:26:14 2025

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