Fluorine in PDB 2iy8: Crystal Structure of the Sialyltransferase PM0188 with Cmp-3FNEUAC and Lactose

The structure of Crystal Structure of the Sialyltransferase PM0188 with Cmp-3FNEUAC and Lactose, PDB code: 2iy8 was solved by D.U.Kim, H.S.Cho, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.00 / 2.50
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	64.736, 65.447, 105.645, 90.00, 90.00, 90.00
R / Rfree (%)	23.5 / 24.4

The binding sites of Fluorine atom in the Crystal Structure of the Sialyltransferase PM0188 with Cmp-3FNEUAC and Lactose (pdb code 2iy8). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of the Sialyltransferase PM0188 with Cmp-3FNEUAC and Lactose, PDB code: 2iy8:

Fluorine binding site 1 out of 1 in the Crystal Structure of the Sialyltransferase PM0188 with Cmp-3FNEUAC and Lactose


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of the Sialyltransferase PM0188 with Cmp-3FNEUAC and Lactose within 5.0Å range: probe atom residue distance (Å) B Occ A:F1415 b:34.6 occ:1.00 F3A A:CSF1415 0.0 34.6 1.0 C3A A:CSF1415 1.4 30.2 1.0 C2A A:CSF1415 2.3 29.2 1.0 C4A A:CSF1415 2.4 30.5 1.0 O6A A:CSF1415 2.7 30.4 1.0 C1A A:CSF1415 2.7 29.2 1.0 C5A A:CSF1415 2.8 30.3 1.0 O4A A:CSF1415 2.9 30.7 1.0 C3 A:LAT1414 3.1 22.1 1.0 OBA A:CSF1415 3.2 27.5 1.0 O3 A:LAT1414 3.2 22.6 1.0 OAA A:CSF1415 3.2 31.1 1.0 C6A A:CSF1415 3.2 33.2 1.0 OD2 A:ASP141 3.3 6.9 1.0 OD1 A:ASP141 3.4 7.7 1.0 C4 A:LAT1414 3.5 21.1 1.0 O1A A:CSF1415 3.6 26.4 1.0 CG A:ASP141 3.7 8.5 1.0 N5A A:CSF1415 4.1 29.8 1.0 C7A A:CSF1415 4.1 36.6 1.0 C5 A:LAT1414 4.2 23.3 1.0 O A:ASP141 4.4 6.0 1.0 C2 A:LAT1414 4.5 23.4 1.0 O10 A:CSF1415 4.8 29.5 1.0 O4 A:LAT1414 4.8 21.9 1.0 CB A:ALA35 4.8 10.0 1.0 C10 A:CSF1415 4.9 30.2 1.0 O2 A:LAT1414 4.9 27.5 1.0 O A:HOH2005 4.9 17.9 1.0 CZ2 A:TRP270 4.9 8.4 1.0 C A:ASP141 5.0 6.3 1.0

D.U.Kim, J.H.Yoo, Y.J.Lee, K.S.Kim, H.S.Cho. Structural Analysis of Sialyltransferase PM0188 From Pasteurella Multocida Complexed with Donor Analogue and Acceptor Sugar. Bmb Rep V. 41 48 2008.
ISSN: ISSN 1976-6696
PubMed: 18304450
DOI: 10.5483/BMBREP.2008.41.1.048