Atomistry » Fluorine » PDB 2z78-3az8 » 3a4p
Atomistry »
  Fluorine »
    PDB 2z78-3az8 »
      3a4p »

Fluorine in PDB 3a4p: Human C-Met Kinase Domain Complexed with 6-Benzyloxyquinoline Inhibitor

Enzymatic activity of Human C-Met Kinase Domain Complexed with 6-Benzyloxyquinoline Inhibitor

All present enzymatic activity of Human C-Met Kinase Domain Complexed with 6-Benzyloxyquinoline Inhibitor:
2.7.10.1;

Protein crystallography data

The structure of Human C-Met Kinase Domain Complexed with 6-Benzyloxyquinoline Inhibitor, PDB code: 3a4p was solved by T.A.Fukami, S.Kadono, M.Yamamuro, T.Matsuura, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.86 / 2.54
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 157.227, 42.733, 46.039, 90.00, 102.91, 90.00
R / Rfree (%) 18.3 / 24

Other elements in 3a4p:

The structure of Human C-Met Kinase Domain Complexed with 6-Benzyloxyquinoline Inhibitor also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Human C-Met Kinase Domain Complexed with 6-Benzyloxyquinoline Inhibitor (pdb code 3a4p). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Human C-Met Kinase Domain Complexed with 6-Benzyloxyquinoline Inhibitor, PDB code: 3a4p:

Fluorine binding site 1 out of 1 in 3a4p

Go back to Fluorine Binding Sites List in 3a4p
Fluorine binding site 1 out of 1 in the Human C-Met Kinase Domain Complexed with 6-Benzyloxyquinoline Inhibitor


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Human C-Met Kinase Domain Complexed with 6-Benzyloxyquinoline Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1362

b:38.0
occ:1.00
F25 A:DFQ1362 0.0 38.0 1.0
C24 A:DFQ1362 1.4 36.5 1.0
C26 A:DFQ1362 2.3 35.1 1.0
C22 A:DFQ1362 2.4 35.8 1.0
CL23 A:DFQ1362 2.9 42.2 1.0
CB A:ALA1221 3.2 10.6 1.0
N A:ASP1222 3.6 13.6 1.0
CB A:ASP1222 3.6 15.4 1.0
C27 A:DFQ1362 3.6 32.9 1.0
O A:ASN1209 3.6 12.1 1.0
CA A:ASN1209 3.7 12.2 1.0
C21 A:DFQ1362 3.7 33.8 1.0
C A:ASN1209 3.8 12.7 1.0
CA A:ASP1222 4.0 15.8 1.0
C A:ALA1221 4.1 12.5 1.0
C28 A:DFQ1362 4.1 31.6 1.0
OD1 A:ASN1209 4.1 12.1 1.0
CB A:ASN1209 4.3 12.1 1.0
CA A:ALA1221 4.3 11.2 1.0
O A:ARG1208 4.3 11.9 1.0
SD A:MET1211 4.3 22.2 1.0
CG A:MET1211 4.5 14.5 1.0
CG A:ASN1209 4.6 12.7 1.0
N A:CYS1210 4.7 12.1 1.0
CG A:ASP1222 4.7 17.9 1.0
O A:ALA1221 4.8 12.0 1.0
N A:ASN1209 4.8 11.6 1.0
OD1 A:ASP1222 5.0 18.2 1.0

Reference:

H.Nishii, T.Chiba, K.Morikami, T.A.Fukami, H.Sakamoto, K.Ko, H.Koyano. Discovery of 6-Benzyloxyquinolines As C-Met Selective Kinase Inhibitors Bioorg.Med.Chem.Lett. V. 20 1405 2010.
ISSN: ISSN 0960-894X
PubMed: 20093027
DOI: 10.1016/J.BMCL.2009.12.109
Page generated: Wed Jul 31 17:04:16 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy