Atomistry » Fluorine » PDB 3b0q-3cct » 3b0q
Atomistry »
  Fluorine »
    PDB 3b0q-3cct »
      3b0q »

Fluorine in PDB 3b0q: Human Ppar Gamma Ligand Binding Domain in Complex with MCC555

Protein crystallography data

The structure of Human Ppar Gamma Ligand Binding Domain in Complex with MCC555, PDB code: 3b0q was solved by D.Tomioka, H.Hashimoto, M.Sato, T.Shimizu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.83 / 2.10
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 93.252, 59.812, 117.846, 90.00, 103.89, 90.00
R / Rfree (%) 19.8 / 22.9

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Human Ppar Gamma Ligand Binding Domain in Complex with MCC555 (pdb code 3b0q). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Human Ppar Gamma Ligand Binding Domain in Complex with MCC555, PDB code: 3b0q:

Fluorine binding site 1 out of 1 in 3b0q

Go back to Fluorine Binding Sites List in 3b0q
Fluorine binding site 1 out of 1 in the Human Ppar Gamma Ligand Binding Domain in Complex with MCC555


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Human Ppar Gamma Ligand Binding Domain in Complex with MCC555 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1

b:43.3
occ:1.00
F A:MC51 0.0 43.3 1.0
C20 A:MC51 1.3 40.9 1.0
C17 A:MC51 2.4 40.5 1.0
C19 A:MC51 2.4 39.8 1.0
C18 A:MC51 2.8 39.3 1.0
CE A:MET364 3.3 57.3 1.0
CG1 A:VAL339 3.4 30.7 1.0
C15 A:MC51 3.6 40.9 1.0
C21 A:MC51 3.6 39.3 1.0
CD1 A:LEU353 3.7 38.8 1.0
CD2 A:LEU353 4.0 40.6 1.0
C10 A:MC51 4.1 39.6 1.0
O1 A:MC51 4.1 39.6 1.0
CG2 A:ILE341 4.3 37.8 1.0
SD A:MET348 4.4 43.2 1.0
SD A:MET364 4.4 50.6 1.0
SG A:CYS285 4.4 45.0 1.0
C6 A:MC51 4.4 37.9 1.0
CG A:LEU353 4.4 40.4 1.0
CB A:VAL339 4.7 31.0 1.0
C7 A:MC51 4.7 38.6 1.0
CB A:MET348 4.8 36.7 1.0
CG A:MET364 4.8 52.6 1.0

Reference:

D.Tomioka, H.Hashimoto, M.Sato, T.Shimizu. Crystal Structure of Human Ppar Gamma in Complex with MCC555 To Be Published.
Page generated: Wed Jul 31 17:13:19 2024

Last articles

Cl in 3L5B
Cl in 3L50
Cl in 3L59
Cl in 3L3R
Cl in 3L3N
Cl in 3L4I
Cl in 3L30
Cl in 3L3A
Cl in 3L38
Cl in 3L2X
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy