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Fluorine in PDB 3dmz: Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant
Enzymatic activity of Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant
All present enzymatic activity of Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant:
3.2.1.17;
3.2.1.17;
Protein crystallography data
The structure of Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant, PDB code: 3dmz
was solved by
L.Liu,
B.W.Matthews,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 51.99 / 2.00 |
| Space group | P 32 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 59.953, 59.953, 95.491, 90.00, 90.00, 120.00 |
| R / Rfree (%) | 17.8 / 21.4 |
Other elements in 3dmz:
The structure of Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant also contains other interesting chemical elements:
| Chlorine | (Cl) | 1 atom |
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant
(pdb code 3dmz). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 6 binding sites of Fluorine where determined in the Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant, PDB code: 3dmz:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Fluorine where determined in the Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant, PDB code: 3dmz:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6;
Fluorine binding site 1 out of 6 in 3dmz
Go back to
Fluorine Binding Sites List in 3dmz
Fluorine binding site 1 out
of 6 in the Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant within 5.0Å range:
|
Fluorine binding site 2 out of 6 in 3dmz
Go back to
Fluorine Binding Sites List in 3dmz
Fluorine binding site 2 out
of 6 in the Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant within 5.0Å range:
|
Fluorine binding site 3 out of 6 in 3dmz
Go back to
Fluorine Binding Sites List in 3dmz
Fluorine binding site 3 out
of 6 in the Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant within 5.0Å range:
|
Fluorine binding site 4 out of 6 in 3dmz
Go back to
Fluorine Binding Sites List in 3dmz
Fluorine binding site 4 out
of 6 in the Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant within 5.0Å range:
|
Fluorine binding site 5 out of 6 in 3dmz
Go back to
Fluorine Binding Sites List in 3dmz
Fluorine binding site 5 out
of 6 in the Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant within 5.0Å range:
|
Fluorine binding site 6 out of 6 in 3dmz
Go back to
Fluorine Binding Sites List in 3dmz
Fluorine binding site 6 out
of 6 in the Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Hexafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant within 5.0Å range:
|
Reference:
L.Liu,
W.A.Baase,
B.W.Matthews.
Halogenated Benzenes Bound Within A Non-Polar Cavity in T4 Lysozyme Provide Examples of I...S and I...Se Halogen-Bonding. J.Mol.Biol. V. 385 595 2009.
ISSN: ISSN 0022-2836
PubMed: 19014950
DOI: 10.1016/J.JMB.2008.10.086
Page generated: Mon Jul 14 15:53:21 2025
ISSN: ISSN 0022-2836
PubMed: 19014950
DOI: 10.1016/J.JMB.2008.10.086
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