Atomistry » Fluorine » PDB 3g72-3gwv » 3got
Atomistry »
  Fluorine »
    PDB 3g72-3gwv »
      3got »

Fluorine in PDB 3got: Guanine Riboswitch C74U Mutant Bound to 2-Fluoroadenine.

Protein crystallography data

The structure of Guanine Riboswitch C74U Mutant Bound to 2-Fluoroadenine., PDB code: 3got was solved by S.D.Gilbert, F.E.Reyes, R.T.Batey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.98 / 1.95
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 132.455, 35.084, 41.891, 90.00, 90.10, 90.00
R / Rfree (%) 21.8 / 26.8

Other elements in 3got:

The structure of Guanine Riboswitch C74U Mutant Bound to 2-Fluoroadenine. also contains other interesting chemical elements:

Cobalt (Co) 11 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Guanine Riboswitch C74U Mutant Bound to 2-Fluoroadenine. (pdb code 3got). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Guanine Riboswitch C74U Mutant Bound to 2-Fluoroadenine., PDB code: 3got:

Fluorine binding site 1 out of 1 in 3got

Go back to Fluorine Binding Sites List in 3got
Fluorine binding site 1 out of 1 in the Guanine Riboswitch C74U Mutant Bound to 2-Fluoroadenine.


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Guanine Riboswitch C74U Mutant Bound to 2-Fluoroadenine. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F91

b:36.0
occ:1.00
F A:A2F91 0.0 36.0 1.0
C2 A:A2F91 1.3 36.1 1.0
N3 A:A2F91 2.3 35.3 1.0
N1 A:A2F91 2.3 34.5 1.0
O2 A:U74 2.8 39.2 1.0
O2 A:U51 2.9 41.5 1.0
N3 A:A52 3.3 34.0 1.0
O2 A:U75 3.4 37.9 1.0
N3 A:U74 3.5 39.5 1.0
C2 A:U74 3.5 39.9 1.0
C4 A:A2F91 3.5 34.9 1.0
C2 A:U75 3.6 35.5 1.0
C6 A:A2F91 3.6 34.1 1.0
C4 A:A52 3.6 36.0 1.0
N3 A:U51 3.6 40.9 1.0
C2 A:U51 3.6 41.9 1.0
C1' A:A52 3.7 35.4 1.0
C1' A:U75 3.7 39.1 1.0
N9 A:A52 3.7 35.7 1.0
N1 A:U75 3.7 37.8 1.0
C2 A:A52 4.0 36.7 1.0
C5 A:A2F91 4.1 34.3 1.0
O A:HOH334 4.1 35.6 1.0
O4' A:U75 4.2 40.9 1.0
O4' A:A52 4.3 37.1 1.0
N3 A:U75 4.3 33.8 1.0
C5 A:A52 4.4 35.7 1.0
C6 A:U75 4.6 34.8 1.0
C8 A:A52 4.6 36.5 1.0
N6 A:A2F91 4.6 31.6 1.0
N9 A:A2F91 4.8 34.8 1.0
N1 A:A73 4.8 36.8 1.0
C4 A:U74 4.8 40.4 1.0
N1 A:A52 4.8 35.1 1.0
C4 A:U51 4.8 41.5 1.0
N1 A:U74 4.9 38.8 1.0
C2' A:A52 4.9 34.6 1.0
N1 A:U51 4.9 42.3 1.0
O2' A:A52 5.0 33.0 1.0
C6 A:A52 5.0 35.3 1.0

Reference:

S.D.Gilbert, F.E.Reyes, A.L.Edwards, R.T.Batey. Adaptive Ligand Binding By the Purine Riboswitch in the Recognition of Guanine and Adenine Analogs Structure V. 17 857 2009.
ISSN: ISSN 0969-2126
PubMed: 19523903
DOI: 10.1016/J.STR.2009.04.009
Page generated: Wed Jul 31 18:57:03 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy