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Fluorine in PDB 3mba: Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.6 Angstroms Resolution

Protein crystallography data

The structure of Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.6 Angstroms Resolution, PDB code: 3mba was solved by M.Bolognesi, S.Onesti, G.Gatti, A.Coda, P.Ascenzi, M.Brunori, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 52.980, 70.700, 32.500, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Other elements in 3mba:

The structure of Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.6 Angstroms Resolution also contains other interesting chemical elements:

Iron (Fe) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.6 Angstroms Resolution (pdb code 3mba). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.6 Angstroms Resolution, PDB code: 3mba:

Fluorine binding site 1 out of 1 in 3mba

Go back to Fluorine Binding Sites List in 3mba
Fluorine binding site 1 out of 1 in the Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.6 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.6 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F149

b:22.3
occ:1.00
FE A:HEM148 2.2 12.2 1.0
NH2 A:ARG66 2.6 23.9 1.0
NA A:HEM148 2.7 8.5 1.0
NE A:ARG66 2.7 15.6 1.0
ND A:HEM148 2.7 9.1 1.0
CZ A:ARG66 3.0 20.9 1.0
NC A:HEM148 3.2 12.5 1.0
NB A:HEM148 3.2 14.9 1.0
CG1 A:ILE67 3.3 10.0 1.0
C4D A:HEM148 3.4 9.4 1.0
C1A A:HEM148 3.4 9.1 1.0
CD1 A:ILE67 3.5 8.0 1.0
CE1 A:PHE43 3.6 15.2 1.0
C4A A:HEM148 3.6 9.1 1.0
CHA A:HEM148 3.6 14.4 1.0
C1D A:HEM148 3.6 5.2 1.0
C4C A:HEM148 3.8 13.8 1.0
CZ A:PHE43 3.8 10.1 1.0
C1B A:HEM148 4.0 8.7 1.0
CD A:ARG66 4.0 17.5 1.0
CHB A:HEM148 4.0 9.4 1.0
C1C A:HEM148 4.0 11.2 1.0
CHD A:HEM148 4.1 8.5 1.0
C4B A:HEM148 4.2 11.1 1.0
NH1 A:ARG66 4.4 12.5 1.0
C3D A:HEM148 4.4 8.7 1.0
CG A:ARG66 4.4 18.9 1.0
NE2 A:HIS95 4.4 9.8 1.0
C2A A:HEM148 4.5 14.5 1.0
CHC A:HEM148 4.5 10.8 1.0
C3A A:HEM148 4.5 6.0 1.0
CG1 A:VAL63 4.5 8.2 1.0
C2D A:HEM148 4.6 7.0 1.0
CD1 A:PHE43 4.7 12.4 1.0
O A:VAL63 4.8 11.6 1.0
CB A:ILE67 4.8 7.8 1.0
C3C A:HEM148 5.0 6.7 1.0

Reference:

M.Bolognesi, S.Onesti, G.Gatti, A.Coda, P.Ascenzi, M.Brunori. Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.6 A Resolution. J.Mol.Biol. V. 205 529 1989.
ISSN: ISSN 0022-2836
PubMed: 2926816
DOI: 10.1016/0022-2836(89)90224-6
Page generated: Wed Jul 31 20:40:51 2024

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