Atomistry » Fluorine » PDB 3sb0-3sym » 3ssj
Atomistry »
  Fluorine »
    PDB 3sb0-3sym »
      3ssj »

Fluorine in PDB 3ssj: Crystal Structure of Methanothermobacter Thermautotrophicus Orotidine 5'-Monophosphate Decarboxylase Complexed with 5-Fluoro-6-Amino-Ump

Enzymatic activity of Crystal Structure of Methanothermobacter Thermautotrophicus Orotidine 5'-Monophosphate Decarboxylase Complexed with 5-Fluoro-6-Amino-Ump

All present enzymatic activity of Crystal Structure of Methanothermobacter Thermautotrophicus Orotidine 5'-Monophosphate Decarboxylase Complexed with 5-Fluoro-6-Amino-Ump:
4.1.1.23;

Protein crystallography data

The structure of Crystal Structure of Methanothermobacter Thermautotrophicus Orotidine 5'-Monophosphate Decarboxylase Complexed with 5-Fluoro-6-Amino-Ump, PDB code: 3ssj was solved by Y.Liu, L.P.Kotra, E.F.Pai, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.40
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 58.416, 103.592, 73.673, 90.00, 90.00, 90.00
R / Rfree (%) 15.1 / 17

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Methanothermobacter Thermautotrophicus Orotidine 5'-Monophosphate Decarboxylase Complexed with 5-Fluoro-6-Amino-Ump (pdb code 3ssj). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of Methanothermobacter Thermautotrophicus Orotidine 5'-Monophosphate Decarboxylase Complexed with 5-Fluoro-6-Amino-Ump, PDB code: 3ssj:

Fluorine binding site 1 out of 1 in 3ssj

Go back to Fluorine Binding Sites List in 3ssj
Fluorine binding site 1 out of 1 in the Crystal Structure of Methanothermobacter Thermautotrophicus Orotidine 5'-Monophosphate Decarboxylase Complexed with 5-Fluoro-6-Amino-Ump


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Methanothermobacter Thermautotrophicus Orotidine 5'-Monophosphate Decarboxylase Complexed with 5-Fluoro-6-Amino-Ump within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F248

b:8.5
occ:1.00
 F24 A:FNU248 0.0 8.5 1.0
C5 A:FNU248 1.4 7.3 1.0
C6 A:FNU248 2.4 7.0 1.0
C4 A:FNU248 2.4 6.9 1.0
N3 A:FNU248 2.8 8.7 1.0
O4 A:FNU248 2.8 7.4 1.0
CD1 A:LEU123 3.1 7.3 1.0
CD2 A:LEU123 3.4 7.9 1.0
CE A:LYS72 3.5 7.3 0.5
CE A:LYS72 3.6 8.2 0.5
N2 A:FNU248 3.6 5.9 1.0
N1 A:FNU248 3.6 5.3 1.0
CG1 A:VAL155 3.7 7.0 1.0
CG A:LEU123 3.9 5.6 1.0
CG A:PRO180 4.0 7.3 1.0
O A:HOH252 4.0 9.2 1.0
NZ A:LYS72 4.1 8.7 0.5
NZ A:LYS72 4.1 9.0 0.5
C2 A:FNU248 4.1 6.8 1.0
CG A:MET126 4.5 7.4 1.0
CD A:LYS72 4.6 7.9 0.5
CB A:VAL155 4.6 6.7 1.0
CD A:LYS72 4.7 6.4 0.5
CB A:LEU123 4.8 6.8 1.0
C1' A:FNU248 4.8 6.2 1.0
CD A:PRO180 4.8 6.9 1.0

Reference:

Y.Liu, L.P.Kotra, E.F.Pai. Crystal Structure of Methanothermobacter Thermautotrophicus Orotidine 5'-Monophosphate Decarboxylase Complexed with 5-Fluoro-6-Amino-Ump To Be Published.
Page generated: Wed Jul 31 22:37:19 2024

Last articles

Br in 5HMJ
Br in 5I5P
Br in 5I0B
Br in 5HNE
Br in 5HKB
Br in 5HJG
Br in 5H11
Br in 5HEX
Br in 5HCM
Br in 5HCJ
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy