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Fluorine in PDB 4fad: Design and Synthesis of A Novel Pyrrolidinyl Pyrido Pyrimidinone Derivative As A Potent Inhibitor of PI3KA and Mtor

Enzymatic activity of Design and Synthesis of A Novel Pyrrolidinyl Pyrido Pyrimidinone Derivative As A Potent Inhibitor of PI3KA and Mtor

All present enzymatic activity of Design and Synthesis of A Novel Pyrrolidinyl Pyrido Pyrimidinone Derivative As A Potent Inhibitor of PI3KA and Mtor:
2.7.1.153; 2.7.11.1;

Protein crystallography data

The structure of Design and Synthesis of A Novel Pyrrolidinyl Pyrido Pyrimidinone Derivative As A Potent Inhibitor of PI3KA and Mtor, PDB code: 4fad was solved by S.E.Greasley, D.R.Knighton, C.M.Lafleur Rogers, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.14 / 2.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 144.550, 67.260, 107.600, 90.00, 95.68, 90.00
R / Rfree (%) 26.2 / 26.5

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Design and Synthesis of A Novel Pyrrolidinyl Pyrido Pyrimidinone Derivative As A Potent Inhibitor of PI3KA and Mtor (pdb code 4fad). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Design and Synthesis of A Novel Pyrrolidinyl Pyrido Pyrimidinone Derivative As A Potent Inhibitor of PI3KA and Mtor, PDB code: 4fad:

Fluorine binding site 1 out of 1 in 4fad

Go back to Fluorine Binding Sites List in 4fad
Fluorine binding site 1 out of 1 in the Design and Synthesis of A Novel Pyrrolidinyl Pyrido Pyrimidinone Derivative As A Potent Inhibitor of PI3KA and Mtor


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Design and Synthesis of A Novel Pyrrolidinyl Pyrido Pyrimidinone Derivative As A Potent Inhibitor of PI3KA and Mtor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1201

b:53.6
occ:1.00
F27 A:0TB1201 0.0 53.6 1.0
C17 A:0TB1201 1.3 54.3 1.0
C18 A:0TB1201 2.3 54.4 1.0
C16 A:0TB1201 2.4 54.2 1.0
O21 A:0TB1201 2.5 55.8 1.0
NZ A:LYS833 3.0 81.0 1.0
CE A:LYS833 3.3 77.2 1.0
CD A:LYS833 3.5 77.5 1.0
N19 A:0TB1201 3.6 52.7 1.0
C15 A:0TB1201 3.6 54.0 1.0
CD1 A:ILE879 3.7 70.3 1.0
C22 A:0TB1201 3.8 55.7 1.0
C20 A:0TB1201 4.0 53.0 1.0
OD2 A:ASP964 4.1 80.7 1.0
CG2 A:ILE831 4.6 63.9 1.0
CG A:ASP964 4.6 72.3 1.0
O14 A:0TB1201 4.6 55.5 1.0
CG A:LYS833 4.7 74.7 1.0
CB A:LYS833 4.7 69.5 1.0
OD1 A:ASP964 4.8 73.5 1.0
C13 A:0TB1201 4.8 54.7 1.0
CG1 A:ILE879 5.0 60.8 1.0

Reference:

P.T.Le, H.Cheng, S.Ninkovic, M.Plewe, X.Huang, H.Wang, S.Bagrodia, S.Sun, D.R.Knighton, C.M.Lafleur Rogers, A.Pannifer, S.Greasley, D.Dalvie, E.Zhang. Design and Synthesis of A Novel Pyrrolidinyl Pyrido Pyrimidinone Derivative As A Potent Inhibitor of PI3KALPHA and Mtor Bioorg.Med.Chem.Lett. V. 22 5098 2012.
ISSN: ISSN 0960-894X
PubMed: 22749419
DOI: 10.1016/J.BMCL.2012.05.100
Page generated: Mon Jul 14 21:35:22 2025

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