Atomistry » Fluorine » PDB 4kbk-4l3l » 4kil
Atomistry »
  Fluorine »
    PDB 4kbk-4l3l »
      4kil »

Fluorine in PDB 4kil: 7-(4-Fluorophenyl)-3-Hydroxyquinolin-2(1H)-One Bound to Influenza 2009 H1N1 Endonuclease

Protein crystallography data

The structure of 7-(4-Fluorophenyl)-3-Hydroxyquinolin-2(1H)-One Bound to Influenza 2009 H1N1 Endonuclease, PDB code: 4kil was solved by J.D.Bauman, D.Patel, K.Das, E.Arnold, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.17 / 1.75
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 88.699, 100.868, 66.441, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 19.6

Other elements in 4kil:

The structure of 7-(4-Fluorophenyl)-3-Hydroxyquinolin-2(1H)-One Bound to Influenza 2009 H1N1 Endonuclease also contains other interesting chemical elements:

Manganese (Mn) 2 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the 7-(4-Fluorophenyl)-3-Hydroxyquinolin-2(1H)-One Bound to Influenza 2009 H1N1 Endonuclease (pdb code 4kil). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the 7-(4-Fluorophenyl)-3-Hydroxyquinolin-2(1H)-One Bound to Influenza 2009 H1N1 Endonuclease, PDB code: 4kil:

Fluorine binding site 1 out of 1 in 4kil

Go back to Fluorine Binding Sites List in 4kil
Fluorine binding site 1 out of 1 in the 7-(4-Fluorophenyl)-3-Hydroxyquinolin-2(1H)-One Bound to Influenza 2009 H1N1 Endonuclease


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of 7-(4-Fluorophenyl)-3-Hydroxyquinolin-2(1H)-One Bound to Influenza 2009 H1N1 Endonuclease within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F305

b:40.1
occ:1.00
F A:1R5305 0.0 40.1 1.0
C10 A:1R5305 1.3 38.1 1.0
C11 A:1R5305 2.3 37.9 1.0
C9 A:1R5305 2.4 37.2 1.0
HA A:MET21 2.4 49.0 1.0
HB2 A:TYR24 2.5 67.3 1.0
HG3 A:GLU26 3.1 78.1 1.0
HG2 A:MET21 3.2 44.3 1.0
HB2 A:GLU26 3.2 65.8 1.0
CA A:MET21 3.4 40.8 1.0
CB A:TYR24 3.4 56.1 1.0
HD2 A:TYR24 3.5 74.5 1.0
C12 A:1R5305 3.6 38.6 1.0
C8 A:1R5305 3.6 38.2 1.0
HB3 A:TYR24 3.7 67.3 1.0
CG A:GLU26 3.7 65.0 1.0
O A:MET21 3.8 46.4 1.0
O A:ALA20 3.8 42.5 1.0
CB A:GLU26 3.9 54.8 1.0
CD A:GLU26 3.9 73.6 1.0
CG A:MET21 4.0 36.9 1.0
C A:MET21 4.1 44.2 1.0
CD2 A:TYR24 4.1 62.1 1.0
H A:TYR24 4.1 60.2 1.0
HD11 A:ILE38 4.1 42.9 1.0
C7 A:1R5305 4.1 38.9 1.0
N A:MET21 4.1 39.4 1.0
CG A:TYR24 4.1 62.8 1.0
CB A:MET21 4.1 39.4 1.0
OE1 A:GLU26 4.2 74.7 1.0
HB3 A:MET21 4.2 47.3 1.0
C A:ALA20 4.2 41.4 1.0
H A:GLU26 4.3 61.3 1.0
HD13 A:ILE38 4.3 42.9 1.0
HG3 A:MET21 4.4 44.3 1.0
CA A:TYR24 4.4 54.2 1.0
HE1 A:MET21 4.5 45.4 1.0
OE2 A:GLU26 4.5 79.4 1.0
HB3 A:GLU26 4.5 65.8 1.0
HD3 A:LYS34 4.6 61.0 1.0
HG2 A:GLU26 4.6 78.1 1.0
CD1 A:ILE38 4.6 35.8 1.0
N A:TYR24 4.7 50.2 1.0
H A:MET21 4.7 47.3 1.0
C A:TYR24 4.7 56.6 1.0
N A:GLU26 4.8 51.1 1.0
HE3 A:MET21 4.8 45.4 1.0
HD2 A:LYS34 5.0 61.0 1.0
CA A:GLU26 5.0 52.3 1.0
O A:TYR24 5.0 60.5 1.0

Reference:

H.Y.Sagong, A.Parhi, J.D.Bauman, D.Patel, R.S.Vijayan, K.Das, E.Arnold, E.J.Lavoie. 3-Hydroxyquinolin-2(1H)-Ones As Inhibitors of Influenza A Endonuclease. Acs Med Chem Lett V. 4 547 2013.
ISSN: ISSN 1948-5875
PubMed: 24936242
DOI: 10.1021/ML4001112
Page generated: Mon Jul 14 22:52:23 2025

Last articles

Mn in 9LJU
Mn in 9LJW
Mn in 9LJS
Mn in 9LJR
Mn in 9LJT
Mn in 9LJV
Mg in 9UA2
Mg in 9R96
Mg in 9VM1
Mg in 9P01
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy