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Fluorine in PDB 4r3c: Crystal Structure of P38 Alpha Map Kinase in Complex with A Novel Isoform Selective Drug Candidate

Enzymatic activity of Crystal Structure of P38 Alpha Map Kinase in Complex with A Novel Isoform Selective Drug Candidate

All present enzymatic activity of Crystal Structure of P38 Alpha Map Kinase in Complex with A Novel Isoform Selective Drug Candidate:
2.7.11.24;

Protein crystallography data

The structure of Crystal Structure of P38 Alpha Map Kinase in Complex with A Novel Isoform Selective Drug Candidate, PDB code: 4r3c was solved by V.L.Grum-Tokars, G.Minasov, S.M.Roy, W.F.Anderson, D.M.Watterson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.93 / 2.06
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 65.850, 74.512, 77.808, 90.00, 90.00, 90.00
R / Rfree (%) 17.5 / 21.7

Other elements in 4r3c:

The structure of Crystal Structure of P38 Alpha Map Kinase in Complex with A Novel Isoform Selective Drug Candidate also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of P38 Alpha Map Kinase in Complex with A Novel Isoform Selective Drug Candidate (pdb code 4r3c). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of P38 Alpha Map Kinase in Complex with A Novel Isoform Selective Drug Candidate, PDB code: 4r3c:

Fluorine binding site 1 out of 1 in 4r3c

Go back to Fluorine Binding Sites List in 4r3c
Fluorine binding site 1 out of 1 in the Crystal Structure of P38 Alpha Map Kinase in Complex with A Novel Isoform Selective Drug Candidate


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of P38 Alpha Map Kinase in Complex with A Novel Isoform Selective Drug Candidate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F401

b:38.0
occ:1.00
F19 A:GG5401 0.0 38.0 1.0
C16 A:GG5401 1.3 37.4 1.0
C17 A:GG5401 2.4 32.3 1.0
C15 A:GG5401 2.4 34.1 1.0
CD1 A:ILE259 3.1 46.0 1.0
CG A:PRO242 3.3 39.5 1.0
CD1 A:LEU195 3.6 48.0 1.0
C14 A:GG5401 3.6 34.9 1.0
C18 A:GG5401 3.6 32.7 1.0
CG1 A:ILE259 3.7 45.7 1.0
CD A:PRO242 3.9 41.3 1.0
CD2 A:LEU236 4.0 38.1 1.0
C13 A:GG5401 4.1 29.2 1.0
CG2 A:ILE259 4.2 46.8 1.0
CD1 A:LEU236 4.3 39.0 1.0
CD1 A:LEU232 4.4 47.0 1.0
CD2 A:LEU291 4.6 45.6 1.0
CB A:ILE259 4.6 45.4 1.0
CB A:PRO242 4.7 39.4 1.0
CG A:LEU195 4.7 45.0 1.0
CD2 A:LEU232 4.7 48.3 1.0
CG A:LEU236 4.7 36.2 1.0
CG A:LEU232 5.0 45.8 1.0

Reference:

S.M.Roy, V.L.Grum-Tokars, J.P.Schavocky, F.Saeed, A.Staniszewski, A.F.Teich, O.Arancio, A.D.Bachstetter, S.J.Webster, L.J.Van Eldik, G.Minasov, W.F.Anderson, J.C.Pelletier, D.M.Watterson. Targeting Human Central Nervous System Protein Kinases: An Isoform Selective P38 Alpha Mapk Inhibitor That Attenuates Disease Progression in Alzheimer'S Disease Mouse Models. Acs Chem Neurosci 2015.
PubMed: 25676389
DOI: 10.1021/ACSCHEMNEURO.5B00002
Page generated: Tue Jul 15 00:34:59 2025

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